RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 MAPK14Q16539 360 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 ACER2Q5QJU3 275 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 MRPL2Q5T653 305 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 LYPD8Q6UX82 237 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 ZNF836Q6ZNA1 936 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 GRAMD2AQ8IUY3 354 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 ZDHHC21Q8IVQ6 265 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 GPALPP1Q8IXQ4 340 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 PQLC1Q8N2U9 271 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 TMEM156Q8N614 296 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 ZNF614Q8N883 585 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 OR10Q1Q8NGQ4 319 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 BRIX1Q8TDN6 353 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 PSMF1Q92530 271 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 C7orf34Q96L11 122 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 SECISBP2Q96T21 854 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 CDCP1Q9H5V8 836 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 ZBTB20Q9HC78 741 aaPredicted RBP13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 ABI3Q9P2A4 366 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 HEATR5AQ86XA9 2040 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 IGF2RP11717 2491 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 NPIPA5A0A0B4J1W7 369 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 CENPVL1A0A0U1RR11 272 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 SERINC4A6NH21 518 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 ALG1L2C9J202 215 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 NPIPA7E9PJI5 369 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 H0Y3Z8 333 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 TP53I11O14683 189 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 NKX2-8O15522 239 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 NPIPA8P0DM63 369 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 ANPEPP15144 967 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 FASP25445 335 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 SOX3P41225 446 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 NRF1Q16656 503 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 ZNF791Q3KP31 576 aaPredicted RBP13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 ATP1A1-AS1Q5TC04 95 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 C16orf47Q6ZP98 133 aaPredicted RBP13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 ERMP1Q7Z2K6 904 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 CARM1Q86X55 608 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 MISPQ8IVT2 679 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 ZNF440Q8IYI8 595 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 AMER2Q8N7J2 671 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 NR4A3Q92570 626 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 ZNF347Q96SE7 839 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 ARHGDIGQ99819 225 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 TBL1XR1Q9BZK7 514 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 AGPAT4Q9NRZ5 378 aa13.35□□□□□ -0.27
NIPAL3-202ENST00000339255 RRP8O43159 456 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 ZNF354AO60765 605 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 LDLRP01130 860 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 WT1P19544 449 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 EVI2BP34910 448 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 RGS8P57771 180 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 FBXW4P57775 412 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 VLDLRP98155 873 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 SRSF6Q13247 344 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 GLIPR1L2Q4G1C9 344 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 ABHD17BQ5VST6 288 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 TMEM81Q6P7N7 255 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 HMGN2P46Q86SG4 172 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 CYP4Z1Q86W10 505 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 GALNT16Q8N428 558 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 SIRT6Q8N6T7 355 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 GATA6Q92908 595 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 HGDQ93099 445 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 SGCZQ96LD1 299 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 RSPO3Q9BXY4 272 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 ING2Q9H160 280 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 FAM32AQ9Y421 112 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 ENPP4Q9Y6X5 453 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 ANKRD11Q6UB99 2663 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 ARGFXA6NJG6 315 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 MASP2O00187 686 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 EFSO43281 561 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 DPM1O60762 260 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 TIPRLO75663 272 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 BAG2O95816 211 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 CSTAP01040 98 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 UBL4AP11441 157 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 OR1E2P47887 323 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 SNTA1Q13424 505 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 ATP6AP1Q15904 470 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 FNDC7Q5VTL7 733 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 FCRLBQ6BAA4 426 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 RANBP3LQ86VV4 465 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 CLIP4Q8N3C7 705 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 POGLUT1Q8NBL1 392 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 FAM71CQ8NEG0 241 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 RNF138Q8WVD3 245 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 BDH2Q9BUT1 245 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 POLR2J2Q9GZM3 115 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 POLR2J3Q9H1A7 115 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 EXOSC3Q9NQT5 275 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 HPF1Q9NWY4 346 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 DNAJB9Q9UBS3 223 aa13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 TESQ9UGI8 421 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-202ENST00000339255 PRDM4Q9UKN5 801 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms