RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ROPN1Q9HAT0 212 aaPredicted RBP13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 PHF11Q9UIL8 331 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 RNF11Q9Y3C5 154 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 LINC01387J3KSC0 135 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 SAP18O00422 153 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 OR7A17O14581 309 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 ABCD4O14678 606 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 SH3BGRLO75368 114 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 GCM2O75603 506 aaPredicted RBP13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 KRT6AP02538 564 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 KRT6BP04259 564 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 RPS17P08708 135 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 NUDT17P0C025 328 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 IMPDH1P20839 514 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 KRT6CP48668 564 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 ARFIP2P53365 341 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 PRKAA2P54646 552 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 CLDN20P56880 219 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 HMGCS1Q01581 520 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 CLCQ05315 142 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 SCGB2A2Q13296 93 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 GGTA1PQ4G0N0 100 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 FBLN7Q53RD9 439 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 CYP20A1Q6UW02 462 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 USP43Q70EL4 1123 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 PAGE2Q7Z2X7 111 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 UBE3DQ7Z6J8 389 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 FBXL14Q8N1E6 418 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 NUP43Q8NFH3 380 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 OR52B6Q8NGF0 335 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 ZNF483Q8TF39 744 aaPredicted RBP13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 TANKQ92844 425 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 DHRS9Q9BPW9 319 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 C1QTNF3Q9BXJ4 246 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 NXF5Q9H1B4 397 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 WDR41Q9HAD4 459 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 FOLH1BQ9HBA9 442 aa13.09□□□□□ -0.31
CTHRC1-201ENST00000330295 E7EQL1 145 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 H3BQF6 201 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 RTCAO00442 366 aaKnown RBP13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 UGT2B11O75310 529 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 SEMA3DO95025 777 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 SCELO95171 688 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 KRT4P19013 534 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 GALNSP34059 522 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 CRHR1P34998 444 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 BUD31P41223 144 aaPredicted RBP13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 SLC6A8P48029 635 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 CDH13P55290 713 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 RPS3AP61247 264 aaKnown RBP13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 SLAMF1Q13291 335 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 P2RY6Q15077 328 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 SGCBQ16585 318 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 OCLNQ16625 522 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 CFAP157Q5JU67 520 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 ZNF678Q5SXM1 525 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 SFRP5Q5T4F7 317 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 OR5M10Q6IEU7 315 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 PPP4R4Q6NUP7 873 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 GPR180Q86V85 440 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 ZCCHC7Q8N3Z6 543 aaKnown RBP13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 METTL25Q8N6Q8 603 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 EPS8L3Q8TE67 593 aaKnown RBP13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 TRPC4APQ8TEL6 797 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 FOXN4Q96NZ1 517 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 NSUN5Q96P11 429 aaKnown RBP13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 CDK15Q96Q40 435 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 HBEGFQ99075 208 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 POTEKPQ9BYX7 375 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 PRRG4Q9BZD6 226 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 FBXO34Q9NWN3 711 aa13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 LYARQ9NX58 379 aaKnown RBP13.08□□□□□ -0.32
CTHRC1-201ENST00000330295 A0A1W2PPM1 405 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 LRP5LA4QPB2 252 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 GUCY1B2O75343 617 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 HMOX2P30519 316 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 PKNOX1P55347 436 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 FOXL1Q12952 345 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 LCP2Q13094 533 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 TRAF3Q13114 568 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 NNATQ16517 81 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 ERCC6LQ2NKX8 1250 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 SGO1Q5FBB7 561 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 RAET1LQ5VY80 246 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 ZYG11AQ6WRX3 759 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 GPRIN3Q6ZVF9 776 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 NUDT13Q86X67 352 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 HOMEZQ8IX15 550 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 GABRG1Q8N1C3 465 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 TMEM151AQ8N4L1 468 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 CCNYL1Q8N7R7 359 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 ZNF615Q8N8J6 731 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 OR4F6Q8NGB9 312 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 WDR20Q8TBZ3 569 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 AENQ8WTP8 325 aaKnown RBP13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 MZB1Q8WU39 189 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 SELENOMQ8WWX9 145 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 OMA1Q96E52 524 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 L3HYPDHQ96EM0 354 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms