RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ABCG2Q9UNQ0 655 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 CDHR4A6H8M9 788 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 SERINC4A6NH21 518 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 CLDN24A6NM45 220 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 SCDO00767 359 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 LDLRP01130 860 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 ITGA2P17301 1181 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 OR1E2P47887 323 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 RRADP55042 308 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 FNDC7Q5VTL7 733 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 FCRLBQ6BAA4 426 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 OPN5Q6U736 354 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 NUP54Q7Z3B4 507 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 TSEN54Q7Z6J9 526 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF614Q8N883 585 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 TMEM102Q8N9M5 508 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 CLEC1AQ8NC01 280 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 OR4D11Q8NGI4 311 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 BRIX1Q8TDN6 353 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 TTC9Q92623 222 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 SPACA9Q96E40 222 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 NAF1Q96HR8 494 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 THOC3Q96J01 351 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 DPH1Q9BZG8 443 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 AMBRA1Q9C0C7 1298 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 CDCP1Q9H5V8 836 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 NDUFAF4Q9P032 175 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 DKK4Q9UBT3 224 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 ENPP4Q9Y6X5 453 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 A0A1W2PQD3 144 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 M0R3H8 397 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 CLOCKO15516 846 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 NKX2-8O15522 239 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 MAN1A2O60476 641 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 DEAF1O75398 565 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 ADH7P40394 386 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 SOX3P41225 446 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 SSR4P51571 173 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 FBXW4P57775 412 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 PLAURQ03405 335 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 CDC20Q12834 499 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 SNCBQ16143 134 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 NTRK2Q16620 822 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF791Q3KP31 576 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 DESI1Q6ICB0 168 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 GRAMD2AQ8IUY3 354 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 LACC1Q8IV20 430 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 VANGL1Q8TAA9 524 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 RNF138Q8WVD3 245 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 PSMF1Q92530 271 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 SLC35B4Q969S0 331 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF300Q96RE9 604 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF347Q96SE7 839 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 LHPPQ9H008 270 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 ZBTB20Q9HC78 741 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 DNAJB12Q9NXW2 375 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 DNAJB9Q9UBS3 223 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 SLC35A3Q9Y2D2 325 aa9.41□□□□□ -0.9
VIPAS39-201ENST00000327028 NINQ8N4C6 2090 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 ALG1L2C9J202 215 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 FADS1O60427 444 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 DPM1O60762 260 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 DNAJB5O75953 348 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 CST1P01037 141 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 ADRB1P08588 477 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 PRKAR1AP10644 381 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 HPGDP15428 266 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 EVI2BP34910 448 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 RNF144AP50876 292 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 RGS8P57771 180 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 SESN3P58005 492 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 NPTX1Q15818 432 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 AMIGO2Q86SJ2 522 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 SIRT6Q8N6T7 355 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 POGLUT1Q8NBL1 392 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 FAM71CQ8NEG0 241 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 OR6T1Q8NGN1 323 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 ASB15Q8WXK1 588 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 TMCO6Q96DC7 493 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 CENPNQ96H22 339 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 WFDC6Q9BQY6 131 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 RLIMQ9NVW2 624 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 STOML1Q9UBI4 398 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 POLHQ9Y253 713 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 CPAMD8Q8IZJ3 1885 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 DOCK10Q96BY6 2186 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 H3BNH8 94 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 CASQ2O14958 399 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 KLK10O43240 276 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 FRS3O43559 492 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 BCAS1O75363 584 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 OR6B1O95007 311 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 PRSS23O95084 383 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 RHCEP18577 417 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 ITGA3P26006 1051 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 MEP1AQ16819 746 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 ACER2Q5QJU3 275 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 OR2T5Q6IEZ7 315 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 DEF8Q6ZN54 512 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 CYP4Z1Q86W10 505 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms