RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 GBX1Q14549 363 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 ELOCQ15369 112 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 FOXRED1Q96CU9 486 aaPredicted RBP12.93□□□□□ -0.34
CLCN6-201ENST00000312413 SGCZQ96LD1 299 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 RANGRFQ9HD47 186 aaPredicted RBP12.93□□□□□ -0.34
CLCN6-201ENST00000312413 GNG13Q9P2W3 67 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 TSPAN11A1L157 253 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 GGT3PA6NGU5 568 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 NPC1O15118 1278 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 SERPINE2P07093 398 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 MLLT11Q13015 90 aaPredicted RBP12.93□□□□□ -0.34
CLCN6-201ENST00000312413 AAK1Q2M2I8 961 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 GPR137CQ8N3F9 429 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 FBRSQ9HAH7 460 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 PLCXD1Q9NUJ7 323 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 GLTPQ9NZD2 209 aa12.93□□□□□ -0.34
CLCN6-201ENST00000312413 MDFIC2A0A1B0GVS7 189 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 FAM171A2A8MVW0 826 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 CTDSP2O14595 271 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 FBLP22087 321 aaKnown RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 C21orf33P30042 268 aaPredicted RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 CASP3P42574 277 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 CXADRP78310 365 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 ZNF252P-AS1Q0IIN9 211 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 DCST2Q5T1A1 773 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 AGAP7PQ5VUJ5 663 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 RAET1LQ5VY80 246 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 UNQ6126/PRO20091Q6UXV3 157 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 TP53INP2Q8IXH6 220 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 SLC2A12Q8TD20 617 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 ADAMTS18Q8TE60 1221 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 BOCQ9BWV1 1114 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 ZNF223Q9UK11 482 aaPredicted RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 V9GY05 133 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 SRPX2O60687 465 aaPredicted RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 APBB3O95704 486 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 SPINT3P49223 89 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 SCGB2A2Q13296 93 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 ZNF546Q86UE3 836 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 IL17RCQ8NAC3 791 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 SIMC1Q8NDZ2 872 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 UHRF1Q96T88 793 aaPredicted RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 PRSS56P0CW18 603 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 EPHA1P21709 976 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 CRABP1P29762 137 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 MMP12P39900 470 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 DEFA6Q01524 100 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 LARP4Q71RC2 724 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 ZNF619Q8N2I2 560 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 TM9SF4Q92544 642 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 MS4A4EQ96PG1 132 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 ST6GALNAC5Q9BVH7 336 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 hCG_1807616A0A1W2PRN6 198 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 DVL2O14641 736 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 SERPINA7P05543 415 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 TFAP2AP05549 437 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 OR51D1Q8NGF3 324 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 HRH4Q9H3N8 390 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 DDX31Q9H8H2 851 aaKnown RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 ABRACLQ9P1F3 81 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 KIF25Q9UIL4 384 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 RPS10-NUDT3A0A1W2PQS6 291 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 KRBOX1C9JBD0 128 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 RPS17P08708 135 aaKnown RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 ARSBP15848 533 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 SDC1P18827 310 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 RPS10P46783 165 aaKnown RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 RAB28P51157 221 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 EIF2B1Q14232 305 aaKnown RBP12.92□□□□□ -0.34
CLCN6-201ENST00000312413 OR7G3Q8NG95 312 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 OR5L2Q8NGL0 311 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 CD200R1Q8TD46 325 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 TMEM239Q8WW34 195 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 SAP130Q9H0E3 1048 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 GPATCH2Q9NW75 528 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 C5AR2Q9P296 337 aa12.92□□□□□ -0.34
CLCN6-201ENST00000312413 MEIS3P1A6NDR6 274 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 FTCDNL1E5RQL4 147 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 TP53P04637 393 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-201ENST00000312413 BMP4P12644 408 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 SHC2P98077 582 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 RBM39Q14498 530 aaKnown RBP12.91□□□□□ -0.34
CLCN6-201ENST00000312413 DUSP7Q16829 419 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 RAB6CQ53S08 254 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 ZNF789Q5FWF6 425 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 NIPAL3Q6P499 406 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 FAM83HQ6ZRV2 1179 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-201ENST00000312413 DPY19L4Q7Z388 723 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 NRARPQ7Z6K4 114 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 SHISA4Q96DD7 197 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 METTL2AQ96IZ6 378 aaKnown RBP12.91□□□□□ -0.34
CLCN6-201ENST00000312413 RAB6CQ9H0N0 254 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 RLIMQ9NVW2 624 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 GMEB2Q9UKD1 530 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 RAB3AP20336 220 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 MSX1P28360 303 aa12.91□□□□□ -0.34
CLCN6-201ENST00000312413 CD68P34810 354 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-201ENST00000312413 FAM180BQ6P0A1 224 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms