RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TRBV2A0A0J9YWF9 115 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 SMIM30A4D0T7 59 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 PRRG2O14669 202 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 FAM189A1O60320 539 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 OXSR1O95747 527 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 HMGN2P05204 90 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 F8A1P23610 371 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 TSC22D1Q15714 1073 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 TMEM196Q5HYL7 178 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 IGHV3-20A0A0C4DH32 117 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 MKRN2OSH3BPM6 223 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 SEMA3DO95025 777 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 RLN2P04090 185 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 CD3GP09693 182 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 MAP4K2Q12851 820 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 NKAIN1Q4KMZ8 207 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 PRAMEF17Q5VTA0 474 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 METRNLQ641Q3 311 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 C3orf33Q6P1S2 294 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 SLITRK4Q8IW52 837 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 SFXN5Q8TD22 340 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 FLRT2O43155 660 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 HTR1EP28566 365 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 CRABP1P29762 137 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 CARD18P57730 90 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 ACTA2P62736 377 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 ACTG2P63267 376 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 LKAAEAR1Q8TD35 194 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 C12orf49Q9H741 205 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 CD320Q9NPF0 282 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 PLEK2Q9NYT0 353 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 PLXNA1Q9UIW2 1896 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 ARHGAP33O14559 1287 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 IMPA1P29218 277 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 METTL2BQ6P1Q9 378 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 VTCN1Q7Z7D3 282 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 LSMEM2Q8N112 164 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 GSTO2Q9H4Y5 243 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 ZNF442Q9H7R0 627 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 KCNIP1Q9NZI2 227 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 LOC102725191A0A1B0GVB3 256 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 PHYHO14832 338 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 ADH7P40394 386 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 DCTN2Q13561 401 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 BCL7AQ4VC05 210 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 SMOC1Q9H4F8 434 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 ARNT2Q9HBZ2 717 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 OBP2BQ9NPH6 170 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 TAS2R10Q9NYW0 307 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 HTRA2O43464 458 aaPredicted RBP10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 FRS3O43559 492 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 SUSD5O60279 629 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 PENKP01210 267 aaPredicted RBP10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 GABRG2P18507 467 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 MAN2A2P49641 1150 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 PGFP49763 221 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 CHRFAM7AQ494W8 412 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 WBP2NLQ6ICG8 309 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 PLBD1Q6P4A8 553 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 GATAD2BQ8WXI9 593 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 METTL2AQ96IZ6 378 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 SAMD8Q96LT4 415 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 GPR83Q9NYM4 423 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 FAM166BA8MTA8 275 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 G3V2L1 256 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 GALR3O60755 368 aaPredicted RBP10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 GLSO94925 669 aaPredicted RBP10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 CDRT1O95170 752 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 FUT1P19526 365 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 MEP1AQ16819 746 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 NKPD1Q17RQ9 610 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 C1orf53Q5VUE5 145 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 FOXRED2Q8IWF2 684 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 SECISBP2Q96T21 854 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 ITPAQ9BY32 194 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 CHIAQ9BZP6 476 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 MED28Q9H204 178 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 DECR2Q9NUI1 292 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 BAIAP2Q9UQB8 552 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 TRIM64BA6NI03 449 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 H3BNX3 289 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 ACOX3O15254 700 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 IFNA21P01568 189 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 AFMIDQ63HM1 303 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 PRR18Q8N4B5 295 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 DEFB127Q9H1M4 99 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 IL37Q9NZH6 218 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 PEX16Q9Y5Y5 336 aa10.04□□□□□ -0.8
SYNPO2-201ENST00000307142 TEX13DA0A0J9YY54 714 aaPredicted RBP10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 SMAD9O15198 467 aaKnown RBP10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 MYBPHQ13203 477 aa10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 PGBD2Q6P3X8 592 aa10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 PIAS4Q8N2W9 510 aaPredicted RBP10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 LILRA3Q8N6C8 439 aaPredicted RBP10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 GCDHQ92947 438 aaPredicted RBP10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 PIGQQ9BRB3 760 aa10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 FAM86C1Q9NVL1 165 aa10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 CARD8Q9Y2G2 431 aa10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 SLC43A1O75387 559 aa10.03□□□□□ -0.8
SYNPO2-201ENST00000307142 SDC1P18827 310 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms