RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 HTR1EP28566 365 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SNCAP37840 140 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 DAP3P51398 398 aaKnown RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 TAS2R38P59533 333 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 OLIG2Q13516 323 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CT45A2Q5DJT8 189 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CT45A1Q5HYN5 189 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 PLCXD3Q63HM9 321 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 PNCKQ6P2M8 343 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ZDHHC24Q6UX98 284 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SERPINA12Q8IW75 414 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 GDPD1Q8N9F7 314 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 OR51L1Q8NGJ5 315 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CT45A3Q8NHU0 189 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 OBP2BQ9NPH6 170 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 TMEM248Q9NWD8 314 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 PLEK2Q9NYT0 353 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 VSX1Q9NZR4 365 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 WTIPA6NIX2 430 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 AGAP14A8MT82 685 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 NUPL2O15504 423 aaKnown RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ANGPTL7O43827 346 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SNCGO76070 127 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 VIPR2P41587 438 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ARG2P78540 354 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 RAB35Q15286 201 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 MPPED2Q15777 294 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SCAMP4Q969E2 229 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 IL17FQ96PD4 163 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 PRRT1Q99946 306 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 HRH4Q9H3N8 390 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 RDH14Q9HBH5 336 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 LUZP4Q9P127 313 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 COL5A2P05997 1499 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 LTN1O94822 1766 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 MEIS3P1A6NDR6 274 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 A6NIZ1 184 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 TOR1AO14656 332 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ARPC1BO15143 372 aaKnown RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 PRAMEF2O60811 474 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 VNN1O95497 513 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 BMXP51813 675 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 PRPS1P60891 318 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 RAP1BP61224 184 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 RAP1AP62834 184 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 IL13RA1P78552 427 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 MKXQ8IYA7 352 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 DMBX1Q8NFW5 382 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ZFAND1Q8TCF1 268 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 GPR148Q8TDV2 347 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 TRUB1Q8WWH5 349 aaKnown RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 TSSK2Q96PF2 358 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 MRI1Q9BV20 369 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 OR51E2Q9H255 320 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 FZD8Q9H461 694 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SLA2Q9H6Q3 261 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 MINDY3Q9H8M7 445 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 KCNIP2Q9NS61 270 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SLC6A14Q9UN76 642 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 C17orf112F2Z3M2 114 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 FANCGO15287 622 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 TRAF3IP2O43734 574 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SOCS5O75159 536 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 UBE2KP61086 200 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SIM1P81133 766 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 TGFBR3Q03167 851 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 TP53I3Q53FA7 332 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF542PQ5EBM4 170 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 FCRLBQ6BAA4 426 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 IDO2Q6ZQW0 420 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF417Q8TAU3 575 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ACKR4Q9NPB9 350 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 HEMK1Q9Y5R4 338 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CACNG2Q9Y698 323 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 A0A1W2PQU0 124 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 A6NL46 340 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 E7ESA3 106 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 PRAF2O60831 178 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 ETFAP13804 333 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 HOXA1P49639 335 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 GRB2P62993 217 aaKnown RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 MEF2DQ14814 521 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 PAPD4Q6PIY7 484 aaKnown RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 C15orf52Q6ZUT6 534 aaKnown RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 CMASQ8NFW8 434 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 SLC7A13Q8TCU3 470 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 GAB3Q8WWW8 586 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 ITFG2Q969R8 447 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 TMEM59Q9BXS4 323 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 AK6Q9Y3D8 172 aaKnown RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 NDUFB2O95178 105 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 LIPCP11150 499 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 ARSBP15848 533 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 GALNT2Q10471 571 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 OR5L1Q8NGL2 311 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 OR6T1Q8NGN1 323 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 NRXN3Q9Y4C0 1643 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 DCCP43146 1447 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 OR7A17O14581 309 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 NPC1O15118 1278 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms