RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZNF559Q9BR84 538 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 PRMT8Q9NR22 394 aaPredicted RBP11.38□□□□□ -0.59
SMG6-201ENST00000263073 SERTAD3Q9UJW9 196 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 LIPT1Q9Y234 373 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 LMO7Q8WWI1 1683 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 TCRBV21S2A2A0A5A6 115 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 GLTPD2A6NH11 291 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 AQP9O43315 295 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 SLC34A2O95436 690 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 EDN1P05305 212 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 ZNF585AQ6P3V2 769 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 UNQ6126/PRO20091Q6UXV3 157 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 LRRTM3Q86VH5 581 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 OR8J2Q8NGG1 315 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 VRK1Q99986 396 aaPredicted RBP11.38□□□□□ -0.59
SMG6-201ENST00000263073 ZNF888P0CJ79 500 aaPredicted RBP11.38□□□□□ -0.59
SMG6-201ENST00000263073 SPINT3P49223 89 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 RPS25P62851 125 aaKnown RBP11.38□□□□□ -0.59
SMG6-201ENST00000263073 GPR149Q86SP6 731 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 CCDC71Q8IV32 467 aaPredicted RBP11.38□□□□□ -0.59
SMG6-201ENST00000263073 DNAAF1Q8NEP3 725 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 BBS1Q8NFJ9 593 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 OR4C15Q8NGM1 316 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 MYLIPQ8WY64 445 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 TMEM175Q9BSA9 504 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 hCG_1807616A0A1W2PRN6 198 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 GPR37L1O60883 481 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 F2P00734 622 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 PRMT2P55345 433 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 RACK1P63244 317 aaKnown RBP11.38□□□□□ -0.59
SMG6-201ENST00000263073 NKX3-2P78367 333 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 ECH1Q13011 328 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 C14orf28Q4W4Y0 310 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 EEF1A1P5Q5VTE0 462 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 PODNL1Q6PEZ8 512 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 LIPIQ6XZB0 460 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 ZNF783Q6ZMS7 281 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 GOLM1Q8NBJ4 401 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 ZNF419Q96HQ0 510 aaPredicted RBP11.38□□□□□ -0.59
SMG6-201ENST00000263073 OR2M4Q96R27 311 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 ZNF436Q9C0F3 470 aaPredicted RBP11.38□□□□□ -0.59
SMG6-201ENST00000263073 NTN4Q9HB63 628 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 OSGIN1Q9UJX0 560 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 ZNF840PA6NDX5 716 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 CPOXP36551 454 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 RTP2Q5QGT7 225 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 RANBP10Q6VN20 620 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 PDZD3Q86UT5 571 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 MS4A15Q8N5U1 240 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 ABHD5Q8WTS1 349 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 C11orf84Q9BUA3 381 aaPredicted RBP11.37□□□□□ -0.59
SMG6-201ENST00000263073 TESQ9UGI8 421 aaKnown RBP11.37□□□□□ -0.59
SMG6-201ENST00000263073 SLC6A5Q9Y345 797 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 SOCS7O14512 581 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 TXNDC12O95881 172 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 HOXB5P09067 269 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 DAPP51397 102 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 STEAP2Q8NFT2 490 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 OR7G3Q8NG95 312 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 MR1Q95460 341 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 DHRS4Q9BTZ2 278 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 C2orf42Q9NWW7 574 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 A0A1W2PQU0 124 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 TRAPPC13A5PLN9 417 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 F5H5K5 113 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 RNGTTO60942 597 aaKnown RBP11.37□□□□□ -0.59
SMG6-201ENST00000263073 SDC3O75056 442 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 IFNA1P01562 189 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 PFKMP08237 780 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 SNRPBP14678 240 aaKnown RBP11.37□□□□□ -0.59
SMG6-201ENST00000263073 ACTBP60709 375 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 ACTG1P63261 375 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 SHISA6Q6ZSJ9 500 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 CYS1Q717R9 158 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 ST7LQ8TDW4 575 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 MUL1Q969V5 352 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 SEC22AQ96IW7 307 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 CAPNS2Q96L46 248 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 PPA2Q9H2U2 334 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 ZNF175Q9Y473 711 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 TRBV4-1A0A0J9YWV2 114 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 OR52A4PA6NMU1 304 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 ZNF736B4DX44 427 aaPredicted RBP11.37□□□□□ -0.59
SMG6-201ENST00000263073 NUDT21O43809 227 aaKnown RBP11.37□□□□□ -0.59
SMG6-201ENST00000263073 FADS1O60427 444 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 RHOP08100 348 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 MAOAP21397 527 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 SFTPDP35247 375 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 HMGCLP35914 325 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 SPOCK1Q08629 439 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 SLC9A3R2Q15599 337 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 VASNQ6EMK4 673 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 TBPL2Q6SJ96 375 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 MAVSQ7Z434 540 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 IFNL1Q8IU54 200 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 LIN37Q96GY3 246 aaPredicted RBP11.37□□□□□ -0.59
SMG6-201ENST00000263073 ACTRT3Q9BYD9 372 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 IL26Q9NPH9 171 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 DIRAS3O95661 229 aa11.37□□□□□ -0.59
SMG6-201ENST00000263073 PTHP01270 115 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms