RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 OPN1SWP03999 348 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 IFNA8P32881 189 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 CLK3P49761 638 aaKnown RBP11.9□□□□□ -0.5
LSM8-201ENST00000249299 SMIM11AP58511 58 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 SNTA1Q13424 505 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 ATP1A4Q13733 1029 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 FGFBP1Q14512 234 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 TGIF1Q15583 401 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 NTRK2Q16620 822 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 MEP1AQ16819 746 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 IQCCQ4KMZ1 466 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 TCTN3Q6NUS6 607 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 VTCN1Q7Z7D3 282 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 FAM86B1Q8N7N1 296 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 SMYD1Q8NB12 490 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 CLEC1AQ8NC01 280 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 TOR1AIP2Q8NFQ8 470 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 OR4C3Q8NH37 302 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 SGCZQ96LD1 299 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 RASL10BQ96S79 203 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 ADOQ96SZ5 270 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 ARHGDIGQ99819 225 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 LHPPQ9H008 270 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 EXOSC3Q9NQT5 275 aaKnown RBP11.9□□□□□ -0.5
LSM8-201ENST00000249299 FBXO34Q9NWN3 711 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 NDUFAF4Q9P032 175 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 KCNE5Q9UJ90 142 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 FAM32AQ9Y421 112 aaKnown RBP11.9□□□□□ -0.5
LSM8-201ENST00000249299 ENPP4Q9Y6X5 453 aa11.9□□□□□ -0.5
LSM8-201ENST00000249299 WDFY3Q8IZQ1 3526 aa11.9□□□□□ -0.51
LSM8-201ENST00000249299 SERINC4A6NH21 518 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 TP53I11O14683 189 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 CLOCKO15516 846 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 ITGA10O75578 1167 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 DNAJB5O75953 348 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 OR2J2O76002 312 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 SSR4P51571 173 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 HMGA2P52926 109 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 Q0VFX4 171 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 NNATQ16517 81 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 MAPK14Q16539 360 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 ZNF791Q3KP31 576 aaPredicted RBP11.89□□□□□ -0.51
LSM8-201ENST00000249299 PDZK1Q5T2W1 519 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 LYPD8Q6UX82 237 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 ZNF550Q7Z398 422 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 ZAR1Q86SH2 424 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 GALNT10Q86SR1 603 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 CYP4Z1Q86W10 505 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 VRK2Q86Y07 508 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 CATSPER1Q8NEC5 780 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 FAM71CQ8NEG0 241 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 KCNE4Q8WWG9 221 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 SPACA9Q96E40 222 aaPredicted RBP11.89□□□□□ -0.51
LSM8-201ENST00000249299 NRBF2Q96F24 287 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 ZNF300Q96RE9 604 aaPredicted RBP11.89□□□□□ -0.51
LSM8-201ENST00000249299 CCNL2Q96S94 520 aaPredicted RBP11.89□□□□□ -0.51
LSM8-201ENST00000249299 VCX3BQ9H321 246 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 RIMS3Q9UJD0 308 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 ACAD8Q9UKU7 415 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 POLHQ9Y253 713 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 SH3GLB1Q9Y371 365 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 MRPS18BQ9Y676 258 aaKnown RBP11.89□□□□□ -0.51
LSM8-201ENST00000249299 SCN2AQ99250 2005 aa11.89□□□□□ -0.51
LSM8-201ENST00000249299 ANKRD33BA6NCL7 494 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 WWP2O00308 870 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 FAAHO00519 579 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 FADS1O60427 444 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 TPST1O60507 370 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 EIF4E2O60573 245 aaKnown RBP11.88□□□□□ -0.51
LSM8-201ENST00000249299 UGT2B11O75310 529 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 OXSR1O95747 527 aaPredicted RBP11.88□□□□□ -0.51
LSM8-201ENST00000249299 BAG2O95816 211 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 CST1P01037 141 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 ADRB1P08588 477 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 THRBP10828 461 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 ITGAMP11215 1152 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 CYP4B1P13584 511 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 ERFP50548 548 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 VLDLRP98155 873 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 SNCBQ16143 134 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 MRPL2Q5T653 305 aaKnown RBP11.88□□□□□ -0.51
LSM8-201ENST00000249299 FNDC7Q5VTL7 733 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 OR2T5Q6IEZ7 315 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 ZNF836Q6ZNA1 936 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 RANBP3LQ86VV4 465 aaPredicted RBP11.88□□□□□ -0.51
LSM8-201ENST00000249299 CARM1Q86X55 608 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 OR2T29Q8NH02 315 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 PSMF1Q92530 271 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 HGDQ93099 445 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 EFHD2Q96C19 240 aaPredicted RBP11.88□□□□□ -0.51
LSM8-201ENST00000249299 PIP5K1AQ99755 562 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 RSPO3Q9BXY4 272 aaPredicted RBP11.88□□□□□ -0.51
LSM8-201ENST00000249299 QRSL1Q9H0R6 528 aaKnown RBP11.88□□□□□ -0.51
LSM8-201ENST00000249299 ANKRD19PQ9H560 264 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 SDHAF3Q9NRP4 125 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 ABI3Q9P2A4 366 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 TESQ9UGI8 421 aaKnown RBP11.88□□□□□ -0.51
LSM8-201ENST00000249299 CHST2Q9Y4C5 530 aa11.88□□□□□ -0.51
LSM8-201ENST00000249299 CDC14CA4D256 554 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 H0Y3Z8 333 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms