RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 C19orf81C9J6K1 198 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 PLA2G10O15496 165 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 GASTP01350 101 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 INSRRP14616 1297 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF25P17030 456 aaPredicted RBP12.15□□□□□ -0.46
VAMP4-201ENST00000236192 TAS2R60P59551 318 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 ST3GAL2Q16842 350 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 SLC39A12Q504Y0 691 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 TAS1R3Q7RTX0 852 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 GLB1L2Q8IW92 636 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 NAGSQ8N159 534 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 OR52N2Q8NGI0 321 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 OR2G2Q8NGZ5 317 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 RXFP4Q8TDU9 374 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 AIF1LQ9BQI0 150 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 OARD1Q9Y530 152 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 SPACA6W5XKT8 324 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 MYH9P35579 1960 aaKnown RBP12.15□□□□□ -0.46
VAMP4-201ENST00000236192 TRBV2A0A0J9YWF9 115 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 SFTPBP07988 381 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 THBS1P07996 1170 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 RAB40ALP0C0E4 278 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 UQCRC2P22695 453 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 PRSS3P35030 304 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF792Q3KQV3 632 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 TFAP2EQ6VUC0 442 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 NLGN1Q8N2Q7 840 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 NAXEQ8NCW5 288 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 RAB40AQ8WXH6 277 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 FN3KRPQ9HA64 309 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 CRTAC1Q9NQ79 661 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 PUS1Q9Y606 427 aaKnown RBP eCLIP12.15□□□□□ -0.46
VAMP4-201ENST00000236192 FAM74A7A6NL05 159 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 OR5K4A6NMS3 321 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 QSOX1O00391 747 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF208O43345 1280 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 ERAL1O75616 437 aaKnown RBP12.15□□□□□ -0.46
VAMP4-201ENST00000236192 FBP1P09467 338 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 CKBP12277 381 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 LAMP2P13473 410 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 AKR1C4P17516 323 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 MSR1P21757 451 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 ACHEP22303 614 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 LSSP48449 732 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 YBEYP58557 167 aaPredicted RBP12.15□□□□□ -0.46
VAMP4-201ENST00000236192 LASP1Q14847 261 aaKnown RBP12.15□□□□□ -0.46
VAMP4-201ENST00000236192 CRY2Q49AN0 593 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 FAM74A3Q4VXF1 159 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 IL34Q6ZMJ4 242 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 TMPRSS12Q86WS5 348 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 SEMA6DQ8NFY4 1073 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 ADAMTS15Q8TE58 950 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 TRIB3Q96RU7 358 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 ATOH8Q96SQ7 321 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 CD180Q99467 661 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 LMAN2LQ9H0V9 348 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 TREX1Q9NSU2 369 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 PPP1R14DQ9NXH3 145 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 SLC22A7Q9Y694 548 aa12.15□□□□□ -0.46
VAMP4-201ENST00000236192 TMEM218A2RU14 115 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 ETFAP13804 333 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF44P15621 663 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 RNF144AP50876 292 aaPredicted RBP12.15□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF79Q15937 498 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 FAM46CQ5VWP2 391 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 LPCAT3Q6P1A2 487 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 OR11H7Q8NGC8 314 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 PXYLP1Q8TE99 480 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 OTUB2Q96DC9 234 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 CPA4Q9UI42 421 aa12.15□□□□□ -0.47
VAMP4-201ENST00000236192 MAFBQ9Y5Q3 323 aaPredicted RBP12.15□□□□□ -0.47
VAMP4-201ENST00000236192 YJEFN3A6XGL0 299 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 IQCF5A8MTL0 148 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 SCAMP2O15127 329 aaKnown RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 B3GAT3O94766 335 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 MRPL19P49406 292 aaKnown RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 HSD17B7P56937 341 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 ILKQ13418 452 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 KIAA0907Q7Z7F0 614 aaPredicted RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 OR4K5Q8NGD3 323 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 TEPSINQ96N21 525 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 TUBB1Q9H4B7 451 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 LUZP4Q9P127 313 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 TMEM129A0AVI4 362 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF593O00488 134 aaPredicted RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 BEST1O76090 585 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 SYPP08247 313 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 SLC6A1P30531 599 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 ITPK1Q13572 414 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 MANEAQ5SRI9 462 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 ACOT7LQ6ZUV0 252 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 LRRC56Q8IYG6 542 aaPredicted RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 GPRC5AQ8NFJ5 357 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 LINC01599Q8WXQ3 324 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 PDLIM5Q96HC4 596 aaKnown RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 POLDIP3Q9BY77 421 aaKnown RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 CRLF2Q9HC73 371 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 GPATCH2Q9NW75 528 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms