RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 H3BN98 237 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 EFCAB14O75071 495 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 CPSF4O95639 269 aaKnown RBP12.2□□□□□ -0.46
MSH2-201ENST00000233146 TIMP2P16035 220 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 LMO2P25791 158 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 ITKQ08881 620 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 AMHR2Q16671 573 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 MFSD14CQ5VZR4 134 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 CDPF1Q6NVV7 123 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 TMEM71Q6P5X7 295 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 THEM5Q8N1Q8 247 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 RBM18Q96H35 190 aaKnown RBP12.2□□□□□ -0.46
MSH2-201ENST00000233146 UTP23Q9BRU9 249 aaKnown RBP12.2□□□□□ -0.46
MSH2-201ENST00000233146 MRIQ9BWK5 157 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 SMCO4Q9NRQ5 59 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 STOX2Q9P2F5 926 aaPredicted RBP12.2□□□□□ -0.46
MSH2-201ENST00000233146 CLEC4AQ9UMR7 237 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 ENPP4Q9Y6X5 453 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 RALGAPA2Q2PPJ7 1873 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 OR6C76A6NM76 312 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 OR2T1O43869 369 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 IQCF3P0C7M6 154 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 GDNFP39905 211 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 PMELP40967 661 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 ACSM1Q08AH1 577 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 RGNQ15493 299 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 RASGEF1AQ8N9B8 481 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 NOX3Q9HBY0 568 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 GFOD1Q9NXC2 390 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
MSH2-201ENST00000233146 RHCGQ9UBD6 479 aa12.2□□□□□ -0.46
MSH2-201ENST00000233146 IRGMA1A4Y4 181 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 CXorf65A6NEN9 183 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 ACTL6AO96019 429 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 HCKP08631 526 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 EDN3P14138 238 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 MECP2P51608 486 aaKnown RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 DAOAP59103 153 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 SRSF3P84103 164 aaKnown RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 MBTD1Q05BQ5 628 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 BOP1Q14137 746 aaKnown RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 KCNA10Q16322 511 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 PTPRNQ16849 979 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 C2orf68Q2NKX9 166 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 ATXN7L2Q5T6C5 722 aaPredicted RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 C18orf63Q68DL7 685 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 TCEAL6Q6IPX3 200 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 SFXN4Q6P4A7 337 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 CLECL1Q8IZS7 167 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 OR5M1Q8NGP8 315 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 OR5J2Q8NH18 312 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 CD200R1Q8TD46 325 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 PXYLP1Q8TE99 480 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 GEMIN6Q8WXD5 167 aaKnown RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 TEAD3Q99594 435 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 ZDHHC5Q9C0B5 715 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 ABCG8Q9H221 673 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 CRTAC1Q9NQ79 661 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 PRKAB1Q9Y478 270 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 GSAPA4D1B5 854 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 TAPBPO15533 448 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 FGF19O95750 216 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 DDTP30046 118 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 CCR7P32248 378 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 EFNB1P98172 346 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 OR52W1Q6IF63 320 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 LIN54Q6MZP7 749 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 ANGPTL8Q6UXH0 198 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 UNQ6494/PRO21346Q6UXR6 183 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 CELF5Q8N6W0 485 aaKnown RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 FBXO15Q8NCQ5 510 aaPredicted RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 OR6X1Q8NH79 312 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 SMAP2Q8WU79 429 aaPredicted RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 SMIM4Q8WVI0 70 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 C14orf79Q96F83 325 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 PHYHIPLQ96FC7 376 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 WDR13Q9H1Z4 485 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 TSPAN10Q9H1Z9 355 aaPredicted RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 ACKR4Q9NPB9 350 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 PLXNA1Q9UIW2 1896 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 TRBV4-1A0A0J9YWV2 114 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 FAM221BA6H8Z2 402 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 BLOC1S5-TXNDC5H3BN57 136 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 CTDSPLO15194 276 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 HYAL3O43820 417 aaPredicted RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 PIP5K1CO60331 668 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 ETFAP13804 333 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 ZNF14P17017 642 aaPredicted RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 ZNF140P52738 457 aaPredicted RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 OC90Q02509 493 aaPredicted RBP12.19□□□□□ -0.46
MSH2-201ENST00000233146 MARCH8Q5T0T0 291 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 IQCF1Q8N6M8 205 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 GPBAR1Q8TDU6 330 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 KCTD13Q8WZ19 329 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 CNTNAP3BQ96NU0 1288 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 MESP1Q9BRJ9 268 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 KCND3Q9UK17 655 aa12.19□□□□□ -0.46
MSH2-201ENST00000233146 NAP1L6A6NFF2 107 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 YJEFN3A6XGL0 299 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms