RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 SFXN3Q9BWM7 321 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 BTBD2Q9BX70 525 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 BHLHE41Q9C0J9 482 aaPredicted RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 GIN1Q9NXP7 522 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 NOP53Q9NZM5 478 aaKnown RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 OTOGQ6ZRI0 2925 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 IGLV3-32A0A0A0MS00 114 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 NPIPA5A0A0B4J1W7 369 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 SLC22A20A6NK97 555 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 NPIPA7E9PJI5 369 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 SCDO00767 359 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 HCRTR2O43614 444 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 NPIPA8P0DM63 369 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 CPA2P48052 419 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 CLDN15P56746 228 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 CLDN20P56880 219 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 FBXL19-AS1Q494R0 122 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 HHATQ5VTY9 493 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 OR4F3Q6IEY1 312 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 CDC73Q6P1J9 531 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 CLEC4FQ8N1N0 589 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 LINC01560Q8TB33 94 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 MGARPQ8TDB4 240 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 ADAMTS15Q8TE58 950 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 FIG4Q92562 907 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 PGM2Q96G03 612 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 ZFP3Q96NJ6 502 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 STACQ99469 402 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 GPATCH1Q9BRR8 931 aaKnown RBP12.84□□□□□ -0.35
GPN3-201ENST00000228827 RBM24Q9BX46 236 aaKnown RBP12.84□□□□□ -0.35
GPN3-201ENST00000228827 PINK1Q9BXM7 581 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 ACTRT3Q9BYD9 372 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 NUF2Q9BZD4 464 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 PIGUQ9H490 435 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 UBQLN4Q9NRR5 601 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 DUSP22Q9NRW4 184 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 PNPOQ9NVS9 261 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 DNAJB12Q9NXW2 375 aaKnown RBP12.84□□□□□ -0.35
GPN3-201ENST00000228827 ASIC5Q9NY37 505 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 JKAMPQ9P055 326 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 FOXD3Q9UJU5 478 aaPredicted RBP12.84□□□□□ -0.35
GPN3-201ENST00000228827 FAF1Q9UNN5 650 aaPredicted RBP12.84□□□□□ -0.35
GPN3-201ENST00000228827 ACTL7BQ9Y614 415 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 KCNE3Q9Y6H6 103 aa12.84□□□□□ -0.35
GPN3-201ENST00000228827 KIAA1549Q9HCM3 1950 aa12.83□□□□□ -0.35
GPN3-201ENST00000228827 TACC2O95359 2948 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 PKDREJQ9NTG1 2253 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 HCFC1P51610 2035 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 OPN1LWP04000 364 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 TUBBP07437 444 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 NGFRP08138 427 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 ATP6V1C1P21283 382 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 CLDN8P56748 225 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 RPS26P62854 115 aaKnown RBP12.83□□□□□ -0.36
GPN3-201ENST00000228827 HBA1P69905 142 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 FLYWCH1Q4VC44 716 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 PPP4R4Q6NUP7 873 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 CROCCP2Q86T23 111 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 CLECL1Q8IZS7 167 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 NATD1Q8N6N6 113 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 CNEP1R1Q8N9A8 125 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 GOT1L1Q8NHS2 421 aaPredicted RBP12.83□□□□□ -0.36
GPN3-201ENST00000228827 PSMA8Q8TAA3 256 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 ZNF845Q96IR2 970 aaPredicted RBP12.83□□□□□ -0.36
GPN3-201ENST00000228827 NPAS1Q99742 590 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 DPY30Q9C005 99 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 NEUROD4Q9HD90 331 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 GPATCH2Q9NW75 528 aa12.83□□□□□ -0.36
GPN3-201ENST00000228827 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.83□□□□□ -0.36
GPN3-201ENST00000228827 A0A1W2PNV4 684 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 TUBAL3A6NHL2 446 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 CTAG2O75638 210 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 SMNDC1O75940 238 aaKnown RBP eCLIP12.82□□□□□ -0.36
GPN3-201ENST00000228827 PEX19P40855 299 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 EEFSECP57772 596 aaKnown RBP12.82□□□□□ -0.36
GPN3-201ENST00000228827 SIRPAP78324 504 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 BST1Q10588 318 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 CD226Q15762 336 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 SMU1Q2TAY7 513 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 GLYR1Q49A26 553 aaPredicted RBP12.82□□□□□ -0.36
GPN3-201ENST00000228827 DCST2Q5T1A1 773 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 KIF18BQ86Y91 864 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 OR5D16Q8NGK9 328 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 PHOSPHO1Q8TCT1 267 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 SFXN5Q8TD22 340 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 FAM222BQ8WU58 562 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 OR7D2Q96RA2 312 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 POLDIP3Q9BY77 421 aaKnown RBP12.82□□□□□ -0.36
GPN3-201ENST00000228827 ACBD3Q9H3P7 528 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 MED17Q9NVC6 651 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 GALNT8Q9NY28 637 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 AP4B1Q9Y6B7 739 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 CREBBPQ92793 2442 aa12.82□□□□□ -0.36
GPN3-201ENST00000228827 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 A6NNC1 897 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 LINC01387J3KSC0 135 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 EIF1AYO14602 144 aaKnown RBP12.81□□□□□ -0.36
GPN3-201ENST00000228827 TNFSF13O75888 250 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 KRT16P08779 473 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms