RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Noxo1Q8VCM2 349 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 NansQ99J77 359 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tor1aQ9ER39 333 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Igkv12-46A0A140T8P6 115 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Pdlim3O70209 316 aaKnown RBP11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Fcgr3P08508 261 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 MitfQ08874 526 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dcp1bQ3U564 578 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Il17fQ7TNI7 161 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Sult1c1Q80VR3 304 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Echs1Q8BH95 290 aaKnown RBP11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mal2Q8BI08 175 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Kcnmb1Q8CAE3 191 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Pink1Q99MQ3 580 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Plekhj1Q9D240 164 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gm8126E9Q1N7 198 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 P04213 122 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Myf6P15375 242 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 ErgP81270 486 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mier2Q3U3N0 541 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Spata6Q3U6K5 488 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Q3U6N9 222 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Kir3dl2Q673W2 388 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Il20raQ6PHB0 546 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mgat4bQ812F8 548 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Rnf38Q8BI21 518 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Klf8Q8BLM0 355 aaKnown RBP11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ap3s2Q8BSZ2 193 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Kyat1Q8BTY1 424 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mterf4Q8BVN4 346 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 PxnQ8VI36 591 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Hhipl2Q9D2G9 717 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Clca3a2Q9EQR4 902 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Chrnb2Q9ERK7 501 aa11.18□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gm9008E9PVG0 424 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Slc6a18O88576 615 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ptpn22P29352 802 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 NcanP55066 1268 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tsc22d1P62500 1077 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Atf4Q06507 349 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Nlrc3Q5DU56 1064 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Fbxl22Q8C7B6 236 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Erich5Q8K0S2 362 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Vmn1r234Q8R298 329 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Elp2Q91WG4 831 aaKnown RBP11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 H2bfmQ9DAB5 224 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Sema4gQ9WUH7 837 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ms4a7E9Q9V5 267 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tuba3aP05214 450 aaKnown RBP11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gpd1P13707 349 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 PrkcaP20444 672 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 IapP24822 559 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Hoxc5P32043 222 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 PdxpP60487 292 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Rnf43Q5NCP0 784 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr835Q7TRG7 311 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Unc119bQ8C4B4 251 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Lurap1lQ8K2P1 221 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Casc3Q8K3W3 698 aaKnown RBP11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dcp1aQ91YD3 602 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Abcb8Q9CXJ4 717 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 EurlQ9D7G4 290 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Emc7Q9EP72 241 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ajap1A2ALI5 412 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gm15821A6X8J8 139 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Vmn2r48E9Q5D8 855 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Galr2O88854 371 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 TtkP35761 856 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 NptnP97300 397 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Slc30a2Q2HJ10 371 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Vmn1r196Q5SVD5 301 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 BC080695Q66JY9 481 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tas2r107Q7M725 308 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr1477Q7TQQ7 315 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 2610318N02RikQ80VT5 305 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gemin8Q8BHE1 238 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Hs3st5Q8BSL4 346 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Pxdc1Q8JZU6 231 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Lrrc49Q91YK0 686 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dhrs1Q99L04 313 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 CalyQ9DCA7 226 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Slc23a2Q9EPR4 648 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dock5B2RY04 1868 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cylc1A0A1B0GR13 642 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 H60cB1B213 197 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tgfbr3lD3YZZ2 297 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 MlxO08609 298 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gosr2O35166 212 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Pip5k1cO70161 661 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Matn4O89029 624 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gsta1P13745 223 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cd48P18181 240 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Fitm2P59266 262 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gsta1Q6P8Q0 223 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 N6amt1Q6SKR2 214 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gpr139Q80UC8 345 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Wdr48Q8BH57 676 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cdk5rap1Q8BTW8 588 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 PigtQ8BXQ2 582 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Grsf1Q8C5Q4 479 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms