RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Sult1c2Q9D939 296 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cyb5r1Q9DB73 305 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Thsd1Q9JM61 851 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Prss16Q9QXE5 509 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd2E9PUS2 523 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Efna3O08545 230 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tyrp1P07147 537 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 En1P09065 401 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmem38aQ3TMP8 298 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Qsox2Q3TMX7 692 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mmp25Q3U435 615 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Galnt12Q8BGT9 576 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zcchc4Q8BKW4 512 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zc2hc1cQ8CCG1 527 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn1r87Q8R255 295 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ogfrl1Q8VE52 464 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr202Q8VGQ3 307 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cdc42ep1Q91W92 409 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Retreg3Q9CQV4 466 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sapcd1Q9CY86 146 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Aaed1Q9D1A0 226 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sema4gQ9WUH7 837 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cdh20Q9Z0M3 801 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ube2ql1A0PJN4 161 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Fbxw24E9PXM9 466 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn1r25H3BLP0 302 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm4778L7N229 365 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P03987 398 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 CfpP11680 464 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Bmp7P23359 430 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 IduaP48441 634 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hcrtr2P58308 460 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Dcp1bQ3U564 578 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vwa5b2Q3UR50 1248 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cd53Q61451 219 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmed3Q78IS1 221 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Lrrc39Q8BGI7 337 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Grsf1Q8C5Q4 479 aaKnown RBP9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc22a6Q8VC69 545 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hdac8Q8VH37 377 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Fmo4Q8VHG0 560 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hrasls5Q9CPX5 270 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cxxc1Q9CWW7 660 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 3110001I22RikQ9CZ70 312 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hyal6Q9D4E9 494 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zdhhc4Q9D6H5 343 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 C1qtnf2Q9D8U4 294 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Il23aQ9EQ14 196 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Phc2Q9QWH1 850 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Plek2Q9WV52 353 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Skint4A7TZF3 474 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Aldh3b2E9Q3E1 479 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ceacam3E9Q6J4 706 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn1r168K7N6B6 309 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cd83O88324 196 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P01669 111 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Il13P20109 131 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Defa14P50712 85 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sox1P53783 391 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zdhhc2P59267 366 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 PrtgQ2EY15 1191 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr320Q7TRZ4 306 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ddhd2Q80Y98 699 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cdkn3Q810P3 211 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ankrd9Q8BH83 326 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc26a9Q8BU91 790 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Lrrn3Q8CBC6 707 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cdc123Q8CII2 336 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sgip1Q8VD37 806 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Eef1e1Q9D1M4 174 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tnfsf13Q9D777 241 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tex29Q9DA77 186 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 March7Q9WV66 693 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Plxnb2B2RXS4 1842 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f15A0A087WR44 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f12A0A0A0MQP3 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Trbv20A0A0B4J1H5 111 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ndor1A2AI05 598 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f9A2BFZ7 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f7A2BHG6 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f19A2CG71 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f10A2CG92 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f3A2CGC2 496 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f13B8JKF6 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm8159E9Q0R1 267 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm1110F6Y113 635 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f2J3QMS5 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f25J3QMV9 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f6J3QMW9 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f26J3QNK2 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f24J3QNQ5 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f8J3QQ50 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f17L7MU81 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f18L7MU83 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Pias3O54714 628 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tp63O88898 680 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P01807 119 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f14Q1LZI5 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Eef2kmtQ3UZW7 335 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Btbd35f27Q5FWA1 498 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms