RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Trim3Q9R1R2 744 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rad9aQ9Z0F6 389 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Col11a1Q61245 1804 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tceal7A3KGA4 98 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Zfp738B8JJX8 793 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm6619F6URP1 175 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm3138K7N754 218 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Nmur1O55040 428 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tcea3P23881 347 aaKnown RBP12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ddx6P54823 483 aaKnown RBP12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cds1P98191 461 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ctnnb1Q02248 781 aaKnown RBP12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ccdc106Q3ULM0 279 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Wdr20Q3UWE6 569 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 MuskQ61006 868 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist2h2abQ64522 130 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Mfsd4aQ6PDC8 510 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Adam29Q811Q4 763 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 GanabQ8BHN3 944 aaKnown RBP12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ap3s2Q8BSZ2 193 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 MepceQ8K3A9 666 aaKnown RBP12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr815Q8VFU0 316 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Emc3Q99KI3 261 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 PrelpQ9JK53 378 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Fam136b-psA0A140T8T1 138 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Dmrtb1A2A9I7 359 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rd3lB2RV38 197 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 ItpkbB2RXC2 942 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 AU018091E9PWS4 684 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 GcatO88986 416 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 P03987 398 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 S100a1P56565 94 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gal3st3P61315 431 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Samd12Q0VE29 161 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Qsox2Q3TMX7 692 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Fbxl19Q6PB97 674 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 AspaQ8R3P0 312 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ccm2lQ8VCC6 481 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Zfyve21Q8VCM3 234 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 ScgnQ91WD9 276 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Pcdhga12Q91XY7 932 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Slc41a3Q921R8 488 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Akr1a1Q9JII6 325 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Nrip3Q9JJR9 240 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Syt8Q9R0N6 395 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 MthfrQ9WU20 654 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ralgapa2A3KGS3 1872 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm14295A2BG91 834 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Scgb2b3D2XZ38 112 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 9330159F19RikD3Z623 648 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Adam3F8VQ03 822 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 PitpnaP53810 271 aaKnown RBP12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm732Q3V0P9 516 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 MeikinQ5F2C3 434 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tgoln1Q62313 353 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Man1c1Q6NXK9 625 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 QpctlQ8BH73 383 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Slc9a7Q8BLV3 726 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Galnt13Q8CF93 556 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr1391Q8VFA4 311 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Yipf2Q99LP8 312 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Mrpl54Q9CPW3 135 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Dusp12Q9D0T2 339 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Necab3Q9D6J4 353 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Dgat2Q9DCV3 388 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Slc7a7Q9Z1K8 510 aa12.04□□□□□ -0.48
Clcn3-201ENSMUST00000004430 H2-M11F6U8V3 335 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr741L7N1Y5 311 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm10696Q3UTC4 357 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rnf215Q5SPX3 379 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cdkn2dQ60773 166 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Zfp82Q6P9Y7 530 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 JamlQ80UL9 379 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Jazf1Q80ZQ5 243 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hat1Q8BY71 416 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Yod1Q8CB27 343 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr1491Q8VEZ5 319 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr539Q8VGL9 319 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rpl34Q9D1R9 117 aaKnown RBP12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Plekhj1Q9D240 164 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ceacam20Q9D2Z1 577 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 HraslsQ9QZU4 167 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Slc22a21Q9WTN6 564 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Wdr76A6PWY4 622 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Zfp362B1ASA5 418 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Vmn2r109K7N747 858 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Bcl2a1dO55179 172 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Pou2f1P25425 770 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Mccc2Q3ULD5 563 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm853Q3UNZ2 425 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 GnptgQ6S5C2 307 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 GatcQ8CBY0 155 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cacnb4Q8R0S4 519 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr551Q8VG23 315 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Zfp61Q923D1 555 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Znf639Q99KZ6 485 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Yipf7Q9JIM5 254 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 H2afb1S4R1E0 115 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Aldh3b2E9Q3E1 479 aa12.03□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr520E9Q518 316 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms