RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	YOR022C	Q12204	715 aa		5.22	□□□□□ -1.57
ATM1	YMR301C	TCP1	P12612	559 aa	Known RBP	5.21	□□□□□ -1.58
ATM1	YMR301C	TRM1	P15565	570 aa	Known RBP	5.21	□□□□□ -1.58
ATM1	YMR301C	GLN3	P18494	730 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	MBR1	P23493	339 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	BUD2	P33314	1104 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	SIP3	P38717	1229 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	ROG3	P43602	733 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	DAN4	P47179	1161 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	RTT102	P53330	157 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	ARK1	P53974	638 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	TBF1	Q02457	562 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	FUS2	Q05670	677 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	IES4	Q08561	116 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	NBL1	Q3E7Y6	73 aa		5.21	□□□□□ -1.58
ATM1	YMR301C	COX4	P04037	155 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	TOM70	P07213	617 aa	Known RBP	5.2	□□□□□ -1.58
ATM1	YMR301C	YEL076C-A	P0CX16	216 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	YLR464W	P0CX17	216 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	FRS2	P15625	503 aa	Known RBP	5.2	□□□□□ -1.58
ATM1	YMR301C	DBP5	P20449	482 aa	Known RBP	5.2	□□□□□ -1.58
ATM1	YMR301C	SEC21	P32074	935 aa	Known RBP	5.2	□□□□□ -1.58
ATM1	YMR301C	SPC42	P36094	363 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	MRPL7	P36519	292 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	RFC5	P38251	354 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	XDJ1	P39102	459 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	YEL076C	P39971	216 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	YIR016W	P40572	265 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	MNP1	P53163	194 aa	Predicted RBP	5.2	□□□□□ -1.58
ATM1	YMR301C	CBK1	P53894	756 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	YNL146W	P53906	100 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	PIG1	Q06216	648 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	RRP15	Q06511	250 aa	Predicted RBP	5.2	□□□□□ -1.58
ATM1	YMR301C	YOL036W	Q08206	761 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	PSK2	Q08217	1101 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	RIP-Chip
ATM1	YMR301C	ALG1	P16661	449 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	RDS2	P19541	446 aa	Known RBP	5.2	□□□□□ -1.58
ATM1	YMR301C	PEX2	P32800	271 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	PGM2	P37012	569 aa	Known RBP	5.2	□□□□□ -1.58
ATM1	YMR301C	VID24	P38263	362 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	YHR202W	P38887	602 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	CCC2	P38995	1004 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	RPS0B	P46654	252 aa	Known RBP	5.2	□□□□□ -1.58
ATM1	YMR301C	CDC73	Q06697	393 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	SGO1	Q08490	590 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	ZPS1	Q12512	249 aa		5.2	□□□□□ -1.58
ATM1	YMR301C	CPA2	P03965	1118 aa	Known RBP	5.19	□□□□□ -1.58
ATM1	YMR301C	KEX2	P13134	814 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	PPZ1	P26570	692 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	DPH2	P32461	534 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	COT1	P32798	439 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	MNN4	P36044	1178 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	PET10	P36139	283 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	CCL1	P37366	393 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	MAF1	P41910	395 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	ELG1	Q12050	791 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	PKH2	Q12236	1081 aa	Known RBP	5.19	□□□□□ -1.58
ATM1	YMR301C	RPL19A	P0CX82	189 aa	Known RBP	5.19	□□□□□ -1.58
ATM1	YMR301C	RPL19B	P0CX83	189 aa	Predicted RBP	5.19	□□□□□ -1.58
ATM1	YMR301C	HAP4	P14064	554 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	PFK1	P16861	987 aa	Known RBP	5.19	□□□□□ -1.58
ATM1	YMR301C	PEX1	P24004	1043 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	PHO87	P25360	923 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	RSA4	P25382	515 aa	Known RBP	5.19	□□□□□ -1.58
ATM1	YMR301C	GUP1	P53154	560 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	CUL3	P53202	744 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	ENV11	P53246	860 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	PIL1	P53252	339 aa	Known RBP	5.19	□□□□□ -1.58
ATM1	YMR301C	CAF130	P53280	1122 aa	Predicted RBP	5.19	□□□□□ -1.58
ATM1	YMR301C	OSW2	Q12202	724 aa		5.19	□□□□□ -1.58
ATM1	YMR301C	ATE1	P16639	503 aa		5.18	□□□□□ -1.58
ATM1	YMR301C	RPT1	P33299	467 aa	Known RBP	5.18	□□□□□ -1.58
ATM1	YMR301C	HEL1	P36113	551 aa		5.18	□□□□□ -1.58
ATM1	YMR301C	MDJ2	P42834	146 aa		5.18	□□□□□ -1.58
ATM1	YMR301C	UBA2	P52488	636 aa		5.18	□□□□□ -1.58
ATM1	YMR301C	YLR257W	Q06146	321 aa	Known RBP	5.18	□□□□□ -1.58
ATM1	YMR301C	MRI1	Q06489	411 aa	Known RBP	5.18	□□□□□ -1.58
ATM1	YMR301C	YPL150W	Q12152	901 aa		5.18	□□□□□ -1.58
ATM1	YMR301C	CCH1	P50077	2039 aa		5.18	□□□□□ -1.58
ATM1	YMR301C	FUR4	P05316	633 aa	Known RBP	5.17	□□□□□ -1.58
ATM1	YMR301C	SNF1	P06782	633 aa	Known RBP	5.17	□□□□□ -1.58
ATM1	YMR301C	CIT2	P08679	460 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	CKA2	P19454	339 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	URA1	P28272	314 aa	Predicted RBP	5.17	□□□□□ -1.58
ATM1	YMR301C	MRX3	P38172	270 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	YER186C	P40101	306 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	MMF1	P40185	145 aa	Known RBP	5.17	□□□□□ -1.58
ATM1	YMR301C	NUP82	P40368	713 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	YJL045W	P47052	634 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	TAM41	P53230	385 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	TRS130	Q03660	1102 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	ECM7	Q06200	448 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	JIP5	Q06214	492 aa	Predicted RBP	5.17	□□□□□ -1.58
ATM1	YMR301C	ESC8	Q08119	714 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
ATM1	YMR301C	RPL4A	P10664	362 aa	Known RBP	5.17	□□□□□ -1.58
ATM1	YMR301C	RPC31	P17890	251 aa		5.17	□□□□□ -1.58
ATM1	YMR301C	NAM7	P30771	971 aa	Known RBP	5.17	□□□□□ -1.58
ATM1	YMR301C	PCM1	P38628	557 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 69.9 ms