RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, human

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-222	ENST00000640634	NLGN2	Q8NFZ4	835 aa		13.98	□□□□□ -0.17
SCARB2-222	ENST00000640634	SETDB2	Q96T68	719 aa		13.98	□□□□□ -0.17
SCARB2-222	ENST00000640634	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.98	□□□□□ -0.17
SCARB2-222	ENST00000640634	C10orf71	Q711Q0	1435 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	TCIRG1	Q13488	830 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	CWF19L2	Q2TBE0	894 aa	Known RBP	13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	ALDH1L2	Q3SY69	923 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	PRR5L	Q6MZQ0	368 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	KSR2	Q6VAB6	950 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	WWC3	Q9ULE0	1092 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	KIAA1551	Q9HCM1	1747 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	ABCC12	Q96J65	1359 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	ANKRD31	Q8N7Z5	1873 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	CACNA1F	O60840	1977 aa		13.97	□□□□□ -0.17
SCARB2-222	ENST00000640634	IGKV5-2	P06315	115 aa		13.96	□□□□□ -0.17
SCARB2-222	ENST00000640634	CT47B1	P0C2W7	299 aa	Predicted RBP	13.96	□□□□□ -0.17
SCARB2-222	ENST00000640634	RTL5	Q5HYW3	569 aa	Predicted RBP	13.96	□□□□□ -0.17
SCARB2-222	ENST00000640634	NLRP10	Q86W26	655 aa		13.96	□□□□□ -0.17
SCARB2-222	ENST00000640634	JARID2	Q92833	1246 aa	Predicted RBP	13.96	□□□□□ -0.17
SCARB2-222	ENST00000640634	NOB1	Q9ULX3	412 aa	Known RBP	13.96	□□□□□ -0.17
SCARB2-222	ENST00000640634	NTSR2	O95665	410 aa		13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	ISCA1	Q9BUE6	129 aa		13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	METTL22	Q9BUU2	404 aa	Predicted RBP	13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	CHMP4A	Q9BY43	222 aa		13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	RGL2	O15211	777 aa		13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	DDX58	O95786	925 aa	Known RBP	13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	COL11A2	P13942	1736 aa	Predicted RBP	13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	ERFE	Q4G0M1	354 aa		13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	ZMYND15	Q9H091	742 aa		13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	KIF13B	Q9NQT8	1826 aa		13.95	□□□□□ -0.18
SCARB2-222	ENST00000640634	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.94	□□□□□ -0.18
SCARB2-222	ENST00000640634	CNBD1	Q8NA66	436 aa		13.94	□□□□□ -0.18
SCARB2-222	ENST00000640634	DNAAF4	Q8WXU2	420 aa		13.94	□□□□□ -0.18
SCARB2-222	ENST00000640634	FRAT1	Q92837	279 aa	Predicted RBP	13.94	□□□□□ -0.18
SCARB2-222	ENST00000640634	ARID3A	Q99856	593 aa		13.94	□□□□□ -0.18
SCARB2-222	ENST00000640634	PXDNL	A1KZ92	1463 aa		13.93	□□□□□ -0.18
SCARB2-222	ENST00000640634	SLC4A10	Q6U841	1118 aa		13.93	□□□□□ -0.18
SCARB2-222	ENST00000640634	C3orf67	Q6ZVT6	689 aa		13.93	□□□□□ -0.18
SCARB2-222	ENST00000640634	SYT17	Q9BSW7	474 aa		13.93	□□□□□ -0.18
SCARB2-222	ENST00000640634	SPDYE4	A6NLX3	237 aa		13.93	□□□□□ -0.18
SCARB2-222	ENST00000640634	CHRNA5	P30532	468 aa		13.93	□□□□□ -0.18
SCARB2-222	ENST00000640634	HSP90AB3P	Q58FF7	597 aa		13.93	□□□□□ -0.18
SCARB2-222	ENST00000640634	FAM89A	Q96GI7	184 aa		13.93	□□□□□ -0.18
SCARB2-222	ENST00000640634	NEURL1B	A8MQ27	555 aa		13.92	□□□□□ -0.18
SCARB2-222	ENST00000640634	NPHP1	O15259	732 aa		13.92	□□□□□ -0.18
SCARB2-222	ENST00000640634	BEND3	Q5T5X7	828 aa		13.92	□□□□□ -0.18
SCARB2-222	ENST00000640634	DDX60	Q8IY21	1712 aa	Known RBP	13.91	□□□□□ -0.18
SCARB2-222	ENST00000640634	PTPRC	P08575	1304 aa		13.91	□□□□□ -0.18
SCARB2-222	ENST00000640634		A0A0G2JLW4	131 aa		13.91	□□□□□ -0.18
SCARB2-222	ENST00000640634	CLUAP1	Q96AJ1	413 aa		13.91	□□□□□ -0.18
SCARB2-222	ENST00000640634	TRMT112	Q9UI30	125 aa	Known RBP	13.91	□□□□□ -0.18
SCARB2-222	ENST00000640634	RCAN3	Q9UKA8	241 aa		13.91	□□□□□ -0.18
SCARB2-222	ENST00000640634	PLIN1	O60240	522 aa		13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	HCLS1	P14317	486 aa	Predicted RBP	13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	TRIM27	P14373	513 aa		13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	PARP10	Q53GL7	1025 aa		13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	SLC51A	Q86UW1	340 aa		13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	UTP14A	Q9BVJ6	771 aa	Known RBP	13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	COL4A1	P02462	1669 aa		13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	KIF16B	Q96L93	1317 aa		13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	DPEP1	P16444	411 aa		13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	TPTE2	Q6XPS3	522 aa		13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	CWC25	Q9NXE8	425 aa	Predicted RBP	13.9	□□□□□ -0.18
SCARB2-222	ENST00000640634	LAMB2	P55268	1798 aa		13.89	□□□□□ -0.19
SCARB2-222	ENST00000640634	GTF2E1	P29083	439 aa	Predicted RBP	13.89	□□□□□ -0.19
SCARB2-222	ENST00000640634	ST5	P78524	1137 aa		13.89	□□□□□ -0.19
SCARB2-222	ENST00000640634	NEXN	Q0ZGT2	675 aa		13.89	□□□□□ -0.19
SCARB2-222	ENST00000640634	TRIM28	Q13263	835 aa	Known RBP	13.89	□□□□□ -0.19
SCARB2-222	ENST00000640634	PPP1R42	Q7Z4L9	355 aa		13.89	□□□□□ -0.19
SCARB2-222	ENST00000640634	LINS1	Q8NG48	757 aa		13.89	□□□□□ -0.19
SCARB2-222	ENST00000640634	CD2AP	Q9Y5K6	639 aa		13.89	□□□□□ -0.19
SCARB2-222	ENST00000640634	RLBP1	P12271	317 aa		13.88	□□□□□ -0.19
SCARB2-222	ENST00000640634	KCNA3	P22001	575 aa		13.88	□□□□□ -0.19
SCARB2-222	ENST00000640634	GCKR	Q14397	625 aa		13.88	□□□□□ -0.19
SCARB2-222	ENST00000640634	UBE3B	Q7Z3V4	1068 aa		13.88	□□□□□ -0.19
SCARB2-222	ENST00000640634	CCDC191	Q8NCU4	936 aa		13.88	□□□□□ -0.19
SCARB2-222	ENST00000640634	NYX	Q9GZU5	481 aa		13.88	□□□□□ -0.19
SCARB2-222	ENST00000640634	ABCC4	O15439	1325 aa		13.88	□□□□□ -0.19
SCARB2-222	ENST00000640634	SH3TC1	Q8TE82	1336 aa		13.88	□□□□□ -0.19
SCARB2-222	ENST00000640634	HMGB1	P09429	215 aa	Known RBP	13.87	□□□□□ -0.19
SCARB2-222	ENST00000640634	PDIA4	P13667	645 aa	Known RBP	13.87	□□□□□ -0.19
SCARB2-222	ENST00000640634	ATF7IP	Q6VMQ6	1270 aa		13.87	□□□□□ -0.19
SCARB2-222	ENST00000640634	BRIP1	Q9BX63	1249 aa		13.87	□□□□□ -0.19
SCARB2-222	ENST00000640634	DLEC1	Q9Y238	1755 aa		13.87	□□□□□ -0.19
SCARB2-222	ENST00000640634	BRCA1	P38398	1863 aa	Known RBP	13.87	□□□□□ -0.19
SCARB2-222	ENST00000640634	C2CD5	Q86YS7	1000 aa		13.87	□□□□□ -0.19
SCARB2-222	ENST00000640634	SRCIN1	Q9C0H9	1055 aa		13.87	□□□□□ -0.19
SCARB2-222	ENST00000640634	CACNA1S	Q13698	1873 aa		13.86	□□□□□ -0.19
SCARB2-222	ENST00000640634	IRS4	O14654	1257 aa	Predicted RBP	13.86	□□□□□ -0.19
SCARB2-222	ENST00000640634	CASP7	P55210	303 aa		13.86	□□□□□ -0.19
SCARB2-222	ENST00000640634	C20orf194	Q5TEA3	1177 aa		13.86	□□□□□ -0.19
SCARB2-222	ENST00000640634	ZKSCAN2	Q63HK3	967 aa		13.86	□□□□□ -0.19
SCARB2-222	ENST00000640634	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.86	□□□□□ -0.19
SCARB2-222	ENST00000640634	PANK1	Q8TE04	598 aa		13.86	□□□□□ -0.19
SCARB2-222	ENST00000640634	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.86	□□□□□ -0.19
SCARB2-222	ENST00000640634	API5	Q9BZZ5	524 aa	Known RBP	13.86	□□□□□ -0.19
SCARB2-222	ENST00000640634	TAF1	P21675	1872 aa		13.85	□□□□□ -0.19
SCARB2-222	ENST00000640634	PCCA	P05165	728 aa	Predicted RBP	13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms