RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 OLFM4Q6UX06 510 aa18.73■□□□□ 0.59
HNRNPU-229ENST00000640440 PPP1R42Q7Z4L9 355 aa18.73■□□□□ 0.59
HNRNPU-229ENST00000640440 IFT57Q9NWB7 429 aa18.73■□□□□ 0.59
HNRNPU-229ENST00000640440 GLTPD2A6NH11 291 aa18.72■□□□□ 0.59
HNRNPU-229ENST00000640440 ALDH1B1P30837 517 aa18.72■□□□□ 0.59
HNRNPU-229ENST00000640440 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
HNRNPU-229ENST00000640440 RPGRQ92834 1020 aaKnown RBP18.72■□□□□ 0.59
HNRNPU-229ENST00000640440 UTP14AQ9BVJ6 771 aaKnown RBP18.72■□□□□ 0.59
HNRNPU-229ENST00000640440 WDR90Q96KV7 1748 aa18.71■□□□□ 0.59
HNRNPU-229ENST00000640440 ANP32CO43423 234 aa18.71■□□□□ 0.59
HNRNPU-229ENST00000640440 GNAI1P63096 354 aa18.71■□□□□ 0.59
HNRNPU-229ENST00000640440 HSP90AB3PQ58FF7 597 aa18.71■□□□□ 0.59
HNRNPU-229ENST00000640440 RBM46Q8TBY0 533 aaKnown RBP18.71■□□□□ 0.59
HNRNPU-229ENST00000640440 TAF1P21675 1872 aa18.71■□□□□ 0.59
HNRNPU-229ENST00000640440 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
HNRNPU-229ENST00000640440 MRS2Q9HD23 443 aa18.7■□□□□ 0.58
HNRNPU-229ENST00000640440 DBF4Q9UBU7 674 aaPredicted RBP18.7■□□□□ 0.58
HNRNPU-229ENST00000640440 TCIRG1Q13488 830 aa18.69■□□□□ 0.58
HNRNPU-229ENST00000640440 NLRP10Q86W26 655 aa18.69■□□□□ 0.58
HNRNPU-229ENST00000640440 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
HNRNPU-229ENST00000640440 HOXA10P31260 410 aaPredicted RBP18.68■□□□□ 0.58
HNRNPU-229ENST00000640440 FKBP4Q02790 459 aaKnown RBP eCLIP18.68■□□□□ 0.583e-7■■■■□ 19.6
HNRNPU-229ENST00000640440 DPY19L2Q6NUT2 758 aa18.68■□□□□ 0.58
HNRNPU-229ENST00000640440 RTKN2Q8IZC4 609 aa18.68■□□□□ 0.58
HNRNPU-229ENST00000640440 RBM17Q96I25 401 aaKnown RBP18.68■□□□□ 0.58
HNRNPU-229ENST00000640440 ZNF277Q9NRM2 450 aaPredicted RBP18.68■□□□□ 0.58
HNRNPU-229ENST00000640440 ELL2O00472 640 aaPredicted RBP18.67■□□□□ 0.58
HNRNPU-229ENST00000640440 PLBD2Q8NHP8 589 aa18.67■□□□□ 0.58
HNRNPU-229ENST00000640440 ZNF428Q96B54 188 aa18.67■□□□□ 0.58
HNRNPU-229ENST00000640440 NLRP3Q96P20 1036 aa18.67■□□□□ 0.58
HNRNPU-229ENST00000640440 HYPKQ9NX55 129 aa18.67■□□□□ 0.58
HNRNPU-229ENST00000640440 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
HNRNPU-229ENST00000640440 SNED1Q8TER0 1413 aa18.66■□□□□ 0.58
HNRNPU-229ENST00000640440 VEGFAP15692 232 aaPredicted RBP18.66■□□□□ 0.58
HNRNPU-229ENST00000640440 SLC10A5Q5PT55 438 aa18.66■□□□□ 0.58
HNRNPU-229ENST00000640440 ANKRD13DQ6ZTN6 518 aa18.66■□□□□ 0.58
HNRNPU-229ENST00000640440 CRAMP1Q96RY5 1269 aa18.66■□□□□ 0.58
HNRNPU-229ENST00000640440 TRMT112Q9UI30 125 aaKnown RBP18.66■□□□□ 0.58
HNRNPU-229ENST00000640440 SCN4AP35499 1836 aa18.65■□□□□ 0.58
HNRNPU-229ENST00000640440 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
HNRNPU-229ENST00000640440 HCLS1P14317 486 aaPredicted RBP18.65■□□□□ 0.58
HNRNPU-229ENST00000640440 SLC51AQ86UW1 340 aa18.65■□□□□ 0.58
HNRNPU-229ENST00000640440 SYNE4Q8N205 404 aa18.65■□□□□ 0.58
HNRNPU-229ENST00000640440 C8orf58Q8NAV2 365 aa18.65■□□□□ 0.58
HNRNPU-229ENST00000640440 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
HNRNPU-229ENST00000640440 APLP1P51693 650 aa18.64■□□□□ 0.57
HNRNPU-229ENST00000640440 FSTL1Q12841 308 aa18.64■□□□□ 0.57
HNRNPU-229ENST00000640440 SH3TC1Q8TE82 1336 aa18.64■□□□□ 0.57
HNRNPU-229ENST00000640440 CACNA1FO60840 1977 aa18.64■□□□□ 0.57
HNRNPU-229ENST00000640440 POTECB2RU33 542 aa18.63■□□□□ 0.57
HNRNPU-229ENST00000640440 ATP5J2-PTCD1G3V325 749 aa18.63■□□□□ 0.57
HNRNPU-229ENST00000640440 DDNO94850 711 aaPredicted RBP18.63■□□□□ 0.57
HNRNPU-229ENST00000640440 IARSP41252 1262 aaKnown RBP18.63■□□□□ 0.57
HNRNPU-229ENST00000640440 CCDC27Q2M243 656 aa18.63■□□□□ 0.57
HNRNPU-229ENST00000640440 CC2D2BQ6DHV5 1058 aa18.63■□□□□ 0.57
HNRNPU-229ENST00000640440 SMC1BQ8NDV3 1235 aa18.63■□□□□ 0.57
HNRNPU-229ENST00000640440 TSR2Q969E8 191 aaKnown RBP18.63■□□□□ 0.57
HNRNPU-229ENST00000640440 ABCC4O15439 1325 aa18.63■□□□□ 0.57
HNRNPU-229ENST00000640440 GOLGA2Q08379 1002 aa18.62■□□□□ 0.57
HNRNPU-229ENST00000640440 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
HNRNPU-229ENST00000640440 PSMD1Q99460 953 aa18.62■□□□□ 0.57
HNRNPU-229ENST00000640440 ISCA1Q9BUE6 129 aa18.62■□□□□ 0.57
HNRNPU-229ENST00000640440 PHAXQ9H814 394 aaKnown RBP18.62■□□□□ 0.57
HNRNPU-229ENST00000640440 ZNF541Q9H0D2 1346 aa18.62■□□□□ 0.57
HNRNPU-229ENST00000640440 COL4A5P29400 1685 aa18.61■□□□□ 0.57
HNRNPU-229ENST00000640440 RIC3Q7Z5B4 369 aa18.61■□□□□ 0.57
HNRNPU-229ENST00000640440 TSPYL6Q8N831 410 aa18.61■□□□□ 0.57
HNRNPU-229ENST00000640440 GRIPAP1Q4V328 841 aa18.59■□□□□ 0.57
HNRNPU-229ENST00000640440 CCDC30Q5VVM6 783 aa18.59■□□□□ 0.57
HNRNPU-229ENST00000640440 FAM89AQ96GI7 184 aa18.59■□□□□ 0.57
HNRNPU-229ENST00000640440 TMX4Q9H1E5 349 aaPredicted RBP18.59■□□□□ 0.57
HNRNPU-229ENST00000640440 ATP6V0A2Q9Y487 856 aa18.59■□□□□ 0.57
HNRNPU-229ENST00000640440 RTL5Q5HYW3 569 aaPredicted RBP18.58■□□□□ 0.56
HNRNPU-229ENST00000640440 DDX46Q7L014 1031 aaKnown RBP18.58■□□□□ 0.56
HNRNPU-229ENST00000640440 SALL2Q9Y467 1007 aaPredicted RBP18.58■□□□□ 0.56
HNRNPU-229ENST00000640440 MYH3P11055 1940 aa18.58■□□□□ 0.56
HNRNPU-229ENST00000640440 LRRC37AA6NMS7 1700 aa18.57■□□□□ 0.56
HNRNPU-229ENST00000640440 FZD9O00144 591 aa18.57■□□□□ 0.56
HNRNPU-229ENST00000640440 HTRA3P83110 453 aa18.57■□□□□ 0.56
HNRNPU-229ENST00000640440 LARGE2Q8N3Y3 721 aa18.57■□□□□ 0.56
HNRNPU-229ENST00000640440 JDP2Q8WYK2 163 aa18.57■□□□□ 0.56
HNRNPU-229ENST00000640440 L3MBTL3Q96JM7 780 aaPredicted RBP18.57■□□□□ 0.56
HNRNPU-229ENST00000640440 MYD88Q99836 296 aa18.57■□□□□ 0.56
HNRNPU-229ENST00000640440 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
HNRNPU-229ENST00000640440 IL16Q14005 1332 aa18.56■□□□□ 0.56
HNRNPU-229ENST00000640440 IQCA1LA6NCM1 817 aa18.56■□□□□ 0.56
HNRNPU-229ENST00000640440 BBOX1O75936 387 aa18.56■□□□□ 0.56
HNRNPU-229ENST00000640440 TRIM28Q13263 835 aaKnown RBP18.56■□□□□ 0.56
HNRNPU-229ENST00000640440 GRAPQ13588 217 aa18.56■□□□□ 0.56
HNRNPU-229ENST00000640440 GRAPLQ8TC17 118 aaPredicted RBP18.56■□□□□ 0.56
HNRNPU-229ENST00000640440 COL4A1P02462 1669 aa18.55■□□□□ 0.56
HNRNPU-229ENST00000640440 DDX58O95786 925 aaKnown RBP18.55■□□□□ 0.56
HNRNPU-229ENST00000640440 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
HNRNPU-229ENST00000640440 POTEJP0CG39 1038 aa18.55■□□□□ 0.56
HNRNPU-229ENST00000640440 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
HNRNPU-229ENST00000640440 FANCIQ9NVI1 1328 aa18.54■□□□□ 0.56
HNRNPU-229ENST00000640440 IRS4O14654 1257 aaPredicted RBP18.54■□□□□ 0.56
HNRNPU-229ENST00000640440 PPIP5K2O43314 1243 aa18.54■□□□□ 0.56
HNRNPU-229ENST00000640440 TWISTNBQ3B726 338 aaPredicted RBP18.54■□□□□ 0.56
HNRNPU-229ENST00000640440 SP8Q8IXZ3 490 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms