RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 COPS6Q7L5N1 327 aa14.84□□□□□ -0.03
SPIN3-236ENST00000640131 DDX54Q8TDD1 881 aaKnown RBP14.84□□□□□ -0.03
SPIN3-236ENST00000640131 MYD88Q99836 296 aa14.84□□□□□ -0.03
SPIN3-236ENST00000640131 SLC52A2Q9HAB3 445 aa14.84□□□□□ -0.03
SPIN3-236ENST00000640131 TPRNQ4KMQ1 711 aa14.83□□□□□ -0.03
SPIN3-236ENST00000640131 CWC27Q6UX04 472 aaKnown RBP14.83□□□□□ -0.03
SPIN3-236ENST00000640131 BICC1Q9H694 974 aaKnown RBP14.83□□□□□ -0.03
SPIN3-236ENST00000640131 FAM177BA6PVY3 158 aa14.83□□□□□ -0.04
SPIN3-236ENST00000640131 U2AF2P26368 475 aaKnown RBP eCLIP14.83□□□□□ -0.048e-6■■■■□ 19.7
SPIN3-236ENST00000640131 POLA2Q14181 598 aa14.83□□□□□ -0.04
SPIN3-236ENST00000640131 SPG7Q9UQ90 795 aa14.83□□□□□ -0.04
SPIN3-236ENST00000640131 TULP2O00295 520 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 PDIA6Q15084 440 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 TTC5Q8N0Z6 440 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 CCDC8Q9H0W5 538 aaPredicted RBP14.82□□□□□ -0.04
SPIN3-236ENST00000640131 PRDM11Q9NQV5 511 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 ZNF330Q9Y3S2 320 aaPredicted RBP14.82□□□□□ -0.04
SPIN3-236ENST00000640131 PTMAP06454 111 aaKnown RBP14.82□□□□□ -0.04
SPIN3-236ENST00000640131 HOXB7P09629 217 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 RAB3GAP1Q15042 981 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 TOM1L2Q6ZVM7 507 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 CADPS2Q86UW7 1296 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 ST18O60284 1047 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 TMED8Q6PL24 325 aaPredicted RBP14.82□□□□□ -0.04
SPIN3-236ENST00000640131 KIF1BPQ96EK5 621 aa14.82□□□□□ -0.04
SPIN3-236ENST00000640131 LOC102724159A0A0B4J2E5 919 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 IGKV5-2P06315 115 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 PWP2Q15269 919 aaKnown RBP14.81□□□□□ -0.04
SPIN3-236ENST00000640131 PI4K2BQ8TCG2 481 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 PRIMPOLQ96LW4 560 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 TSPYL1Q9H0U9 437 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 PXDNLA1KZ92 1463 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 CABP4P57796 275 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 HMGN5P82970 282 aaKnown RBP14.81□□□□□ -0.04
SPIN3-236ENST00000640131 GABPB1Q06547 395 aaPredicted RBP14.81□□□□□ -0.04
SPIN3-236ENST00000640131 AACSQ86V21 672 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 IFNL2Q8IZJ0 200 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 KAZALD1Q96I82 304 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 DDX21Q9NR30 783 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPIN3-236ENST00000640131 ZNF335Q9H4Z2 1342 aaPredicted RBP14.81□□□□□ -0.04
SPIN3-236ENST00000640131 ALS2Q96Q42 1657 aa14.81□□□□□ -0.04
SPIN3-236ENST00000640131 GRM8O00222 908 aa14.8□□□□□ -0.04
SPIN3-236ENST00000640131 CPA1P15085 419 aa14.8□□□□□ -0.04
SPIN3-236ENST00000640131 BRINP3Q76B58 766 aa14.8□□□□□ -0.04
SPIN3-236ENST00000640131 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
SPIN3-236ENST00000640131 TLR7Q9NYK1 1049 aaKnown RBP14.8□□□□□ -0.04
SPIN3-236ENST00000640131 NDUFB9Q9Y6M9 179 aa14.8□□□□□ -0.04
SPIN3-236ENST00000640131 GTF2F1P35269 517 aaKnown RBP eCLIP14.8□□□□□ -0.04
SPIN3-236ENST00000640131 EPHA10Q5JZY3 1008 aa14.8□□□□□ -0.04
SPIN3-236ENST00000640131 GBP4Q96PP9 640 aa14.8□□□□□ -0.04
SPIN3-236ENST00000640131 PHRF1Q9P1Y6 1649 aaKnown RBP14.8□□□□□ -0.04
SPIN3-236ENST00000640131 C5P01031 1676 aa14.8□□□□□ -0.04
SPIN3-236ENST00000640131 MCTP1Q6DN14 999 aa14.79□□□□□ -0.04
SPIN3-236ENST00000640131 PDLIM2Q96JY6 352 aa14.79□□□□□ -0.04
SPIN3-236ENST00000640131 KIF1AQ12756 1690 aa14.79□□□□□ -0.04
SPIN3-236ENST00000640131 STAP2Q9UGK3 403 aa14.79□□□□□ -0.04
SPIN3-236ENST00000640131 CHMP3Q9Y3E7 222 aa14.79□□□□□ -0.04
SPIN3-236ENST00000640131 SPATA31A3Q5VYP0 1347 aa14.79□□□□□ -0.04
SPIN3-236ENST00000640131 NCAPD2Q15021 1401 aa14.78□□□□□ -0.04
SPIN3-236ENST00000640131 TNS3Q68CZ2 1445 aa14.78□□□□□ -0.04
SPIN3-236ENST00000640131 RAB11FIP3O75154 756 aa14.78□□□□□ -0.04
SPIN3-236ENST00000640131 DDX58O95786 925 aaKnown RBP14.78□□□□□ -0.04
SPIN3-236ENST00000640131 IFIT2P09913 472 aaKnown RBP14.78□□□□□ -0.04
SPIN3-236ENST00000640131 CLASRPQ8N2M8 674 aaKnown RBP14.78□□□□□ -0.04
SPIN3-236ENST00000640131 BCL2L12Q9HB09 334 aa14.78□□□□□ -0.04
SPIN3-236ENST00000640131 SLFN14P0C7P3 912 aa14.78□□□□□ -0.04
SPIN3-236ENST00000640131 UBE3BQ7Z3V4 1068 aa14.78□□□□□ -0.04
SPIN3-236ENST00000640131 LINS1Q8NG48 757 aa14.78□□□□□ -0.04
SPIN3-236ENST00000640131 CALCOCO1Q9P1Z2 691 aa14.78□□□□□ -0.04
SPIN3-236ENST00000640131 TUBGCP6Q96RT7 1819 aa14.78□□□□□ -0.04
SPIN3-236ENST00000640131 EDC3Q96F86 508 aaKnown RBP14.77□□□□□ -0.04
SPIN3-236ENST00000640131 CCDC39Q9UFE4 941 aa14.77□□□□□ -0.04
SPIN3-236ENST00000640131 N4BP2Q86UW6 1770 aaPredicted RBP14.77□□□□□ -0.04
SPIN3-236ENST00000640131 TNNT3P45378 269 aaPredicted RBP14.77□□□□□ -0.05
SPIN3-236ENST00000640131 TMX3Q96JJ7 454 aa14.77□□□□□ -0.05
SPIN3-236ENST00000640131 FEZ1Q99689 392 aa14.77□□□□□ -0.05
SPIN3-236ENST00000640131 EFCC1Q9HA90 598 aa14.77□□□□□ -0.05
SPIN3-236ENST00000640131 MCCP23508 829 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 NEXNQ0ZGT2 675 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 EP400NLQ6ZTU2 488 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 BOLA2Q9H3K6 86 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 OGFRQ9NZT2 677 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 BAG4O95429 457 aaKnown RBP14.76□□□□□ -0.05
SPIN3-236ENST00000640131 TRERF1Q96PN7 1200 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 HEG1Q9ULI3 1381 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 SIPA1L3O60292 1781 aaPredicted RBP14.76□□□□□ -0.05
SPIN3-236ENST00000640131 NEURL1BA8MQ27 555 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 ALDH1L1O75891 902 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 SASH1O94885 1247 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 KIAA2012Q0VF49 1180 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 G3BP1Q13283 466 aaKnown RBP eCLIP14.76□□□□□ -0.05
SPIN3-236ENST00000640131 ANKRD13DQ6ZTN6 518 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 CNTROBQ8N137 903 aa14.76□□□□□ -0.05
SPIN3-236ENST00000640131 EAF2Q96CJ1 260 aaPredicted RBP14.76□□□□□ -0.05
SPIN3-236ENST00000640131 CIZ1Q9ULV3 898 aaPredicted RBP14.76□□□□□ -0.05
SPIN3-236ENST00000640131 SCN11AQ9UI33 1791 aa14.75□□□□□ -0.05
SPIN3-236ENST00000640131 A0A0G2JS52 829 aa14.75□□□□□ -0.05
SPIN3-236ENST00000640131 CHGBP05060 677 aa14.75□□□□□ -0.05
SPIN3-236ENST00000640131 GRIPAP1Q4V328 841 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms