RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 FAM173BQ6P4H8 233 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 ZNF589Q86UQ0 364 aaPredicted RBP9.21□□□□□ -0.93
NECAP1-224ENST00000640099 TTC14Q96N46 770 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 SEC62Q99442 399 aaKnown RBP9.21□□□□□ -0.93
NECAP1-224ENST00000640099 TTC41PQ6P2S7 1318 aa9.21□□□□□ -0.94
NECAP1-224ENST00000640099 GJB2P29033 226 aa9.21□□□□□ -0.94
NECAP1-224ENST00000640099 ERC1Q8IUD2 1116 aa9.21□□□□□ -0.94
NECAP1-224ENST00000640099 EVI5LQ96CN4 794 aa9.21□□□□□ -0.94
NECAP1-224ENST00000640099 INTS4Q96HW7 963 aaKnown RBP9.21□□□□□ -0.94
NECAP1-224ENST00000640099 KDM6AO15550 1401 aaPredicted RBP9.21□□□□□ -0.94
NECAP1-224ENST00000640099 FOSBP53539 338 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 CREB3L3Q68CJ9 461 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 ZBTB3Q9H5J0 574 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 STRN4Q9NRL3 753 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 CYP46A1Q9Y6A2 500 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 WDR33Q9C0J8 1336 aaKnown RBP9.2□□□□□ -0.94
NECAP1-224ENST00000640099 MEGF6O75095 1541 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 CLCN1P35523 988 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 CCDC173Q0VFZ6 552 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 DDX46Q7L014 1031 aaKnown RBP9.2□□□□□ -0.94
NECAP1-224ENST00000640099 NEUROD6Q96NK8 337 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 METTL22Q9BUU2 404 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-224ENST00000640099 CCDC171Q6TFL3 1326 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 RPAP1Q9BWH6 1393 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-224ENST00000640099 STX6O43752 255 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 A1BGP04217 495 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 SNRPA1P09661 255 aaKnown RBP9.2□□□□□ -0.94
NECAP1-224ENST00000640099 ME3Q16798 604 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 TTLL7Q6ZT98 887 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 LRRC2Q9BYS8 371 aa9.2□□□□□ -0.94
NECAP1-224ENST00000640099 MED1Q15648 1581 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-224ENST00000640099 ZKSCAN1P17029 563 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-224ENST00000640099 LRSAM1Q6UWE0 723 aa9.19□□□□□ -0.94
NECAP1-224ENST00000640099 LMBR1LQ6UX01 489 aa9.19□□□□□ -0.94
NECAP1-224ENST00000640099 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
NECAP1-224ENST00000640099 DBNDD2Q9BQY9 259 aa9.19□□□□□ -0.94
NECAP1-224ENST00000640099 HEG1Q9ULI3 1381 aa9.19□□□□□ -0.94
NECAP1-224ENST00000640099 ZSCAN22P10073 491 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-224ENST00000640099 DNM1Q05193 864 aaKnown RBP9.19□□□□□ -0.94
NECAP1-224ENST00000640099 FMNL2Q96PY5 1086 aa9.19□□□□□ -0.94
NECAP1-224ENST00000640099 DBNLQ9UJU6 430 aaKnown RBP9.19□□□□□ -0.94
NECAP1-224ENST00000640099 SLC27A2O14975 620 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 ZNF594Q96JF6 807 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-224ENST00000640099 PRDM11Q9NQV5 511 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 TPCN1Q9ULQ1 816 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 RGPD5Q99666 1765 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-224ENST00000640099 MBD3O95983 291 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 ST3GAL1Q11201 340 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 KDM3BQ7LBC6 1761 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 TIMM10P62072 90 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 PTPN12Q05209 780 aaKnown RBP9.18□□□□□ -0.94
NECAP1-224ENST00000640099 NECTIN1Q15223 517 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 NAP1L2Q9ULW6 460 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-224ENST00000640099 HDAC5Q9UQL6 1122 aa9.18□□□□□ -0.94
NECAP1-224ENST00000640099 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-224ENST00000640099 CACNA1FO60840 1977 aa9.17□□□□□ -0.94
NECAP1-224ENST00000640099 USP42Q9H9J4 1324 aaKnown RBP9.17□□□□□ -0.94
NECAP1-224ENST00000640099 MSNP26038 577 aaKnown RBP9.17□□□□□ -0.94
NECAP1-224ENST00000640099 DCAF5Q96JK2 942 aa9.17□□□□□ -0.94
NECAP1-224ENST00000640099 NCAPD2Q15021 1401 aa9.17□□□□□ -0.94
NECAP1-224ENST00000640099 A0A0G2JS52 829 aa9.17□□□□□ -0.94
NECAP1-224ENST00000640099 NBPF26B4DH59 902 aa9.17□□□□□ -0.94
NECAP1-224ENST00000640099 F13A1P00488 732 aa9.17□□□□□ -0.94
NECAP1-224ENST00000640099 NBPF14Q5TI25 921 aa9.17□□□□□ -0.94
NECAP1-224ENST00000640099 NBPF10Q6P3W6 841 aaKnown RBP9.17□□□□□ -0.94
NECAP1-224ENST00000640099 NBPF15Q8N660 670 aa9.17□□□□□ -0.94
NECAP1-224ENST00000640099 TSPY26PQ9H489 355 aa9.17□□□□□ -0.94
NECAP1-224ENST00000640099 PTMAP06454 111 aaKnown RBP9.16□□□□□ -0.94
NECAP1-224ENST00000640099 TNNI3KQ59H18 835 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 BLOC1S2Q6QNY1 142 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 PPP1R9BQ96SB3 815 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 ZSWIM6Q9HCJ5 1215 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 FPGT-TNNI3KV9GXZ4 949 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 LARP1BQ659C4 914 aaKnown RBP9.16□□□□□ -0.94
NECAP1-224ENST00000640099 GIMAP6Q6P9H5 292 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 MAP4K1Q92918 833 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 TFIP11Q9UBB9 837 aaKnown RBP9.16□□□□□ -0.94
NECAP1-224ENST00000640099 GOLIM4O00461 696 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 CDC37L1Q7L3B6 337 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 DDX11Q96FC9 970 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 LMO7Q8WWI1 1683 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 SLIT3O75094 1523 aa9.16□□□□□ -0.94
NECAP1-224ENST00000640099 A0A0G2JLW4 131 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 HCLS1P14317 486 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-224ENST00000640099 HSP90B1P14625 803 aaKnown RBP9.15□□□□□ -0.94
NECAP1-224ENST00000640099 FGD1P98174 961 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 VPS53Q5VIR6 699 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 LRP10Q7Z4F1 713 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 ZNF830Q96NB3 372 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-224ENST00000640099 SNRKQ9NRH2 765 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 MTMR6Q9Y217 621 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 TUBGCP6Q96RT7 1819 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 UTYO14607 1347 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 JAK2O60674 1132 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 RFX5P48382 616 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-224ENST00000640099 LRRC24Q50LG9 513 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 HSP90AB3PQ58FF7 597 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms