RNA–Protein interactions for RNA: ENST00000639730.1

KCNMA1-270, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-270ENST00000639730 ZNF530Q6P9A1 599 aaPredicted RBP9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 BCL2L12Q9HB09 334 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 LETM1O95202 739 aaPredicted RBP9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 TAF7Q15545 349 aaPredicted RBP9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 KIF3AQ9Y496 699 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 WDR90Q96KV7 1748 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 RGPD2P0DJD1 1756 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 EVA1CP58658 441 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 NOLC1Q14978 699 aaKnown RBP eCLIP9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 R3HDM1Q15032 1099 aaKnown RBP9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 DDB1Q16531 1140 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 BMP2KLQ5H9B9 411 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 ATF7IPQ6VMQ6 1270 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 ZNF771Q7L3S4 317 aaPredicted RBP9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 PDCL2Q8N4E4 241 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 USHBP1Q8N6Y0 703 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 ZDHHC9Q9Y397 364 aa9.39□□□□□ -0.91
KCNMA1-270ENST00000639730 CEMIPQ8WUJ3 1361 aa9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 ADRA2BP18089 450 aa9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 NUCB2P80303 420 aa9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 TWISTNBQ3B726 338 aaPredicted RBP9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 MCM10Q7L590 875 aa9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 ARHGAP45Q92619 1136 aa9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 ZBTB40Q9NUA8 1239 aa9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 CD2APQ9Y5K6 639 aa9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 IFFO2Q5TF58 517 aa9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 TSPYL4Q9UJ04 414 aa9.38□□□□□ -0.91
KCNMA1-270ENST00000639730 CYP2E1P05181 493 aaPredicted RBP9.37□□□□□ -0.91
KCNMA1-270ENST00000639730 PLCB2Q00722 1185 aa9.37□□□□□ -0.91
KCNMA1-270ENST00000639730 TEFQ10587 303 aa9.37□□□□□ -0.91
KCNMA1-270ENST00000639730 CHRNA2Q15822 529 aa9.37□□□□□ -0.91
KCNMA1-270ENST00000639730 THUMPD2Q9BTF0 503 aaKnown RBP9.37□□□□□ -0.91
KCNMA1-270ENST00000639730 USP25Q9UHP3 1055 aa9.37□□□□□ -0.91
KCNMA1-270ENST00000639730 VAMP4O75379 141 aa9.37□□□□□ -0.91
KCNMA1-270ENST00000639730 TOM1L2Q6ZVM7 507 aa9.37□□□□□ -0.91
KCNMA1-270ENST00000639730 DCTN1Q14203 1278 aa9.36□□□□□ -0.91
KCNMA1-270ENST00000639730 IFNL2Q8IZJ0 200 aa9.36□□□□□ -0.91
KCNMA1-270ENST00000639730 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
KCNMA1-270ENST00000639730 CCDC9Q9Y3X0 531 aaKnown RBP9.36□□□□□ -0.91
KCNMA1-270ENST00000639730 HOXB7P09629 217 aa9.36□□□□□ -0.91
KCNMA1-270ENST00000639730 PRIMPOLQ96LW4 560 aa9.36□□□□□ -0.91
KCNMA1-270ENST00000639730 IL17REQ8NFR9 667 aa9.36□□□□□ -0.91
KCNMA1-270ENST00000639730 PIBF1Q8WXW3 757 aa9.36□□□□□ -0.91
KCNMA1-270ENST00000639730 THSD7BQ9C0I4 1608 aa9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 RNMTO43148 476 aaKnown RBP9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 HMGN5P82970 282 aaKnown RBP9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 NOL8Q76FK4 1167 aaKnown RBP9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 API5Q9BZZ5 524 aaKnown RBP9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 TSPY26PQ9H489 355 aa9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 C4AP0C0L4 1744 aa9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 TRIM37O94972 964 aa9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 IL2RBP14784 551 aa9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 C1QTNF8P60827 252 aa9.35□□□□□ -0.91
KCNMA1-270ENST00000639730 PCDH11XQ9BZA7 1347 aa9.34□□□□□ -0.91
KCNMA1-270ENST00000639730 PCDH11YQ9BZA8 1340 aa9.34□□□□□ -0.91
KCNMA1-270ENST00000639730 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
KCNMA1-270ENST00000639730 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
KCNMA1-270ENST00000639730 DCAF5Q96JK2 942 aa9.34□□□□□ -0.91
KCNMA1-270ENST00000639730 CDK11BP21127 795 aaKnown RBP9.34□□□□□ -0.91
KCNMA1-270ENST00000639730 RABEP1Q15276 862 aa9.34□□□□□ -0.91
KCNMA1-270ENST00000639730 EXOC5O00471 708 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 CDC45O75419 566 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 GSPT1P15170 499 aaKnown RBP9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 PHKG2P15735 406 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 GTF2F1P35269 517 aaKnown RBP eCLIP9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 TXNRD1Q16881 649 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 CCDC30Q5VVM6 783 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 MRPL50Q8N5N7 158 aaKnown RBP9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 STK31Q9BXU1 1019 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 PTPRCP08575 1304 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 ADCY5O95622 1261 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 C8orf58Q8NAV2 365 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 ZCRB1Q8TBF4 217 aaKnown RBP9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 PPP1R1BQ9UD71 204 aaPredicted RBP9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 MEGF6O75095 1541 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 APBB1O00213 710 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 RGL2O15211 777 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 GADD45BO75293 160 aaPredicted RBP9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 KCNJ4P48050 445 aa9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 C16orf71Q8IYS4 520 aaPredicted RBP9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 IPO4Q8TEX9 1081 aaKnown RBP9.33□□□□□ -0.92
KCNMA1-270ENST00000639730 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 BTBD11A6QL63 1104 aa9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 SMARCA5O60264 1052 aaPredicted RBP9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 POLD1P28340 1107 aa9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 MARCH10Q8NA82 808 aaPredicted RBP9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 SCN11AQ9UI33 1791 aa9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 NAA30Q147X3 362 aaPredicted RBP9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 STRN4Q9NRL3 753 aa9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 MRC1P22897 1456 aa9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 DICER1Q9UPY3 1922 aaKnown RBP9.32□□□□□ -0.92
KCNMA1-270ENST00000639730 SMARCC1Q92922 1105 aaPredicted RBP9.31□□□□□ -0.92
KCNMA1-270ENST00000639730 PYCARDQ9ULZ3 195 aa9.31□□□□□ -0.92
KCNMA1-270ENST00000639730 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
KCNMA1-270ENST00000639730 IRX5P78411 483 aaPredicted RBP9.31□□□□□ -0.92
KCNMA1-270ENST00000639730 MPRIPQ6WCQ1 1025 aa9.31□□□□□ -0.92
KCNMA1-270ENST00000639730 SIRT2Q8IXJ6 389 aa9.31□□□□□ -0.92
KCNMA1-270ENST00000639730 TSPYL6Q8N831 410 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms