RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
CLN6-225ENST00000638144 SRGNP10124 158 aa16.09■□□□□ 0.17
CLN6-225ENST00000638144 PARP10Q53GL7 1025 aa16.09■□□□□ 0.17
CLN6-225ENST00000638144 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
CLN6-225ENST00000638144 TTLL6Q8N841 843 aa16.09■□□□□ 0.17
CLN6-225ENST00000638144 UTP14AQ9BVJ6 771 aaKnown RBP16.09■□□□□ 0.17
CLN6-225ENST00000638144 ADCY9O60503 1353 aa16.09■□□□□ 0.17
CLN6-225ENST00000638144 CACNA1FO60840 1977 aa16.08■□□□□ 0.16
CLN6-225ENST00000638144 RTL5Q5HYW3 569 aaPredicted RBP16.08■□□□□ 0.16
CLN6-225ENST00000638144 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
CLN6-225ENST00000638144 MYD88Q99836 296 aa16.08■□□□□ 0.16
CLN6-225ENST00000638144 DDX60Q8IY21 1712 aaKnown RBP16.08■□□□□ 0.16
CLN6-225ENST00000638144 E9PSI1 815 aa16.07■□□□□ 0.16
CLN6-225ENST00000638144 HCLS1P14317 486 aaPredicted RBP16.07■□□□□ 0.16
CLN6-225ENST00000638144 SLFN5Q08AF3 891 aa16.07■□□□□ 0.16
CLN6-225ENST00000638144 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
CLN6-225ENST00000638144 ISCA1Q9BUE6 129 aa16.07■□□□□ 0.16
CLN6-225ENST00000638144 TRMT112Q9UI30 125 aaKnown RBP16.07■□□□□ 0.16
CLN6-225ENST00000638144 MAP3K2Q9Y2U5 619 aa16.07■□□□□ 0.16
CLN6-225ENST00000638144 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLN6-225ENST00000638144 RASSF7Q02833 373 aa16.06■□□□□ 0.16
CLN6-225ENST00000638144 PRPF40BQ6NWY9 871 aaKnown RBP16.06■□□□□ 0.16
CLN6-225ENST00000638144 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
CLN6-225ENST00000638144 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
CLN6-225ENST00000638144 TAF1P21675 1872 aa16.05■□□□□ 0.16
CLN6-225ENST00000638144 PI4KAP2A4QPH2 592 aa16.05■□□□□ 0.16
CLN6-225ENST00000638144 C21orf2O43822 256 aa16.05■□□□□ 0.16
CLN6-225ENST00000638144 DDX58O95786 925 aaKnown RBP16.05■□□□□ 0.16
CLN6-225ENST00000638144 FLIIQ13045 1269 aa16.05■□□□□ 0.16
CLN6-225ENST00000638144 STYK1Q6J9G0 422 aa16.05■□□□□ 0.16
CLN6-225ENST00000638144 OLFM4Q6UX06 510 aa16.05■□□□□ 0.16
CLN6-225ENST00000638144 PI4KAP1Q8N8J0 262 aa16.05■□□□□ 0.16
CLN6-225ENST00000638144 FAM89AQ96GI7 184 aa16.05■□□□□ 0.16
CLN6-225ENST00000638144 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
CLN6-225ENST00000638144 SBF1O95248 1867 aa16.04■□□□□ 0.16
CLN6-225ENST00000638144 CCDC88AQ3V6T2 1871 aa16.04■□□□□ 0.16
CLN6-225ENST00000638144 KLRG2A4D1S0 409 aaPredicted RBP16.04■□□□□ 0.16
CLN6-225ENST00000638144 NPR1P16066 1061 aa16.04■□□□□ 0.16
CLN6-225ENST00000638144 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
CLN6-225ENST00000638144 METTL22Q9BUU2 404 aaPredicted RBP16.04■□□□□ 0.16
CLN6-225ENST00000638144 PDZRN3Q9UPQ7 1066 aa16.04■□□□□ 0.16
CLN6-225ENST00000638144 RIC1Q4ADV7 1423 aa16.03■□□□□ 0.16
CLN6-225ENST00000638144 SH3TC1Q8TE82 1336 aa16.03■□□□□ 0.16
CLN6-225ENST00000638144 CRY2Q49AN0 593 aa16.03■□□□□ 0.16
CLN6-225ENST00000638144 KSR2Q6VAB6 950 aa16.03■□□□□ 0.16
CLN6-225ENST00000638144 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
CLN6-225ENST00000638144 CNKSR1Q969H4 720 aa16.03■□□□□ 0.16
CLN6-225ENST00000638144 BCL2L13Q9BXK5 485 aa16.03■□□□□ 0.16
CLN6-225ENST00000638144 FER1L6Q2WGJ9 1857 aa16.03■□□□□ 0.16
CLN6-225ENST00000638144 F6X3S4 739 aa16.02■□□□□ 0.16
CLN6-225ENST00000638144 IGKV5-2P06315 115 aa16.02■□□□□ 0.16
CLN6-225ENST00000638144 CWF19L2Q2TBE0 894 aaKnown RBP16.02■□□□□ 0.16
CLN6-225ENST00000638144 COL4A1P02462 1669 aa16.02■□□□□ 0.15
CLN6-225ENST00000638144 PRELPP51888 382 aa16.01■□□□□ 0.15
CLN6-225ENST00000638144 ZNF784Q8NCA9 323 aaPredicted RBP16.01■□□□□ 0.15
CLN6-225ENST00000638144 RNF123Q5XPI4 1314 aa16■□□□□ 0.15
CLN6-225ENST00000638144 NFKBIEO00221 500 aa16■□□□□ 0.15
CLN6-225ENST00000638144 SLC10A5Q5PT55 438 aa16■□□□□ 0.15
CLN6-225ENST00000638144 C9orf131Q5VYM1 1079 aa16■□□□□ 0.15
CLN6-225ENST00000638144 TRMT2AQ8IZ69 625 aaKnown RBP16■□□□□ 0.15
CLN6-225ENST00000638144 ZNF526Q8TF50 670 aaPredicted RBP16■□□□□ 0.15
CLN6-225ENST00000638144 NLRP3Q96P20 1036 aa16■□□□□ 0.15
CLN6-225ENST00000638144 CWC25Q9NXE8 425 aaPredicted RBP16■□□□□ 0.15
CLN6-225ENST00000638144 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
CLN6-225ENST00000638144 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
CLN6-225ENST00000638144 TRIM28Q13263 835 aaKnown RBP15.99■□□□□ 0.15
CLN6-225ENST00000638144 DNAAF4Q8WXU2 420 aa15.99■□□□□ 0.15
CLN6-225ENST00000638144 SSH1Q8WYL5 1049 aa15.99■□□□□ 0.15
CLN6-225ENST00000638144 RNF181Q9P0P0 153 aa15.99■□□□□ 0.15
CLN6-225ENST00000638144 ABCC4O15439 1325 aa15.98■□□□□ 0.15
CLN6-225ENST00000638144 NEURL1BA8MQ27 555 aa15.98■□□□□ 0.15
CLN6-225ENST00000638144 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
CLN6-225ENST00000638144 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
CLN6-225ENST00000638144 RBM17Q96I25 401 aaKnown RBP15.98■□□□□ 0.15
CLN6-225ENST00000638144 CCDC85AQ96PX6 553 aaPredicted RBP15.98■□□□□ 0.15
CLN6-225ENST00000638144 HOXA10P31260 410 aaPredicted RBP15.97■□□□□ 0.15
CLN6-225ENST00000638144 MRPL50Q8N5N7 158 aaKnown RBP15.97■□□□□ 0.15
CLN6-225ENST00000638144 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
CLN6-225ENST00000638144 C7orf43Q8WVR3 580 aa15.97■□□□□ 0.15
CLN6-225ENST00000638144 MYH3P11055 1940 aa15.96■□□□□ 0.15
CLN6-225ENST00000638144 PPEF1O14829 653 aaPredicted RBP15.96■□□□□ 0.15
CLN6-225ENST00000638144 PCCAP05165 728 aaPredicted RBP15.96■□□□□ 0.15
CLN6-225ENST00000638144 ALDH1B1P30837 517 aa15.96■□□□□ 0.15
CLN6-225ENST00000638144 UBE3BQ7Z3V4 1068 aa15.96■□□□□ 0.15
CLN6-225ENST00000638144 CRAMP1Q96RY5 1269 aa15.96■□□□□ 0.15
CLN6-225ENST00000638144 CCDC93Q567U6 631 aa15.95■□□□□ 0.14
CLN6-225ENST00000638144 SLC4A10Q6U841 1118 aa15.95■□□□□ 0.14
CLN6-225ENST00000638144 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
CLN6-225ENST00000638144 SMC4Q9NTJ3 1288 aa15.95■□□□□ 0.14
CLN6-225ENST00000638144 SPEF2Q9C093 1822 aa15.95■□□□□ 0.14
CLN6-225ENST00000638144 DICER1Q9UPY3 1922 aaKnown RBP15.95■□□□□ 0.14
CLN6-225ENST00000638144 LMNB1P20700 586 aa15.94■□□□□ 0.14
CLN6-225ENST00000638144 GCKRQ14397 625 aa15.94■□□□□ 0.14
CLN6-225ENST00000638144 DDX46Q7L014 1031 aaKnown RBP15.94■□□□□ 0.14
CLN6-225ENST00000638144 SNED1Q8TER0 1413 aa15.94■□□□□ 0.14
CLN6-225ENST00000638144 BEND3Q5T5X7 828 aa15.93■□□□□ 0.14
CLN6-225ENST00000638144 SOGA3Q5TF21 947 aa15.93■□□□□ 0.14
CLN6-225ENST00000638144 LINS1Q8NG48 757 aa15.93■□□□□ 0.14
CLN6-225ENST00000638144 CELF1Q92879 486 aaKnown RBP15.93■□□□□ 0.14
CLN6-225ENST00000638144 SEC31BQ9NQW1 1179 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms