RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 PPP4CP60510 307 aa16.77■□□□□ 0.27
CACNA1A-244ENST00000637625 CCDC85AQ96PX6 553 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-244ENST00000637625 CDC42BPGQ6DT37 1551 aa16.77■□□□□ 0.27
CACNA1A-244ENST00000637625 SOWAHBA6NEL2 793 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 NR1I2O75469 434 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 KCNA6P17658 529 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 WDR43Q15061 677 aaKnown RBP eCLIP16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 MSS51Q4VC12 460 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 CHD2O14647 1828 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 NSD2O96028 1365 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 BLMP54132 1417 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 ST18O60284 1047 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 MMP16P51512 607 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 EMP3P54852 163 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 SWI5Q1ZZU3 235 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 EML3Q32P44 896 aa16.76■□□□□ 0.27
CACNA1A-244ENST00000637625 MON2Q7Z3U7 1717 aa16.75■□□□□ 0.27
CACNA1A-244ENST00000637625 NPHP4O75161 1426 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-244ENST00000637625 FAM205CA6NFA0 338 aa16.75■□□□□ 0.27
CACNA1A-244ENST00000637625 GPKOWQ92917 476 aaPredicted RBP eCLIP16.74■□□□□ 0.27
CACNA1A-244ENST00000637625 ADAMTS8Q9UP79 889 aa16.74■□□□□ 0.27
CACNA1A-244ENST00000637625 SHPRHQ149N8 1683 aa16.74■□□□□ 0.27
CACNA1A-244ENST00000637625 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-244ENST00000637625 OCLNQ16625 522 aa16.73■□□□□ 0.27
CACNA1A-244ENST00000637625 NKTRP30414 1462 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-244ENST00000637625 LZTS3O60299 673 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-244ENST00000637625 MAP7D1Q3KQU3 841 aa16.73■□□□□ 0.27
CACNA1A-244ENST00000637625 SH3BP5LQ7L8J4 393 aa16.73■□□□□ 0.27
CACNA1A-244ENST00000637625 DNAAF2Q9NVR5 837 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-244ENST00000637625 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
CACNA1A-244ENST00000637625 FYB1O15117 783 aa16.72■□□□□ 0.27
CACNA1A-244ENST00000637625 PRMT3O60678 531 aa16.72■□□□□ 0.27
CACNA1A-244ENST00000637625 ZNF16P17020 682 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-244ENST00000637625 PTCRAQ6ISU1 281 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-244ENST00000637625 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
CACNA1A-244ENST00000637625 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
CACNA1A-244ENST00000637625 MRRFQ96E11 262 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-244ENST00000637625 ARHGAP9Q9BRR9 750 aa16.71■□□□□ 0.27
CACNA1A-244ENST00000637625 CPSF1Q10570 1443 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-244ENST00000637625 SPSB2Q99619 263 aa16.71■□□□□ 0.27
CACNA1A-244ENST00000637625 MTHFSP49914 203 aa16.7■□□□□ 0.26
CACNA1A-244ENST00000637625 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
CACNA1A-244ENST00000637625 SIX5Q8N196 739 aa16.7■□□□□ 0.26
CACNA1A-244ENST00000637625 ARMC2Q8NEN0 867 aa16.7■□□□□ 0.26
CACNA1A-244ENST00000637625 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-244ENST00000637625 MARSP56192 900 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-244ENST00000637625 ANKK1Q8NFD2 765 aa16.69■□□□□ 0.26
CACNA1A-244ENST00000637625 POLR3AO14802 1390 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-244ENST00000637625 LGR5O75473 907 aa16.69■□□□□ 0.26
CACNA1A-244ENST00000637625 C1orf216Q8TAB5 229 aa16.69■□□□□ 0.26
CACNA1A-244ENST00000637625 TSR3Q9UJK0 312 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-244ENST00000637625 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
CACNA1A-244ENST00000637625 FMN2Q9NZ56 1722 aa16.68■□□□□ 0.26
CACNA1A-244ENST00000637625 MCCD1P59942 119 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-244ENST00000637625 LSM11P83369 360 aaKnown RBP eCLIP16.68■□□□□ 0.26
CACNA1A-244ENST00000637625 NME9Q86XW9 330 aa16.68■□□□□ 0.26
CACNA1A-244ENST00000637625 PRIMPOLQ96LW4 560 aa16.68■□□□□ 0.26
CACNA1A-244ENST00000637625 LARGE2Q8N3Y3 721 aa16.67■□□□□ 0.26
CACNA1A-244ENST00000637625 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-244ENST00000637625 NPAS4Q8IUM7 802 aa16.67■□□□□ 0.26
CACNA1A-244ENST00000637625 PMFBP1Q8TBY8 1022 aa16.67■□□□□ 0.26
CACNA1A-244ENST00000637625 UNC93B1Q9H1C4 597 aa16.67■□□□□ 0.26
CACNA1A-244ENST00000637625 FBLN1P23142 703 aa16.66■□□□□ 0.26
CACNA1A-244ENST00000637625 SH3RF1Q7Z6J0 888 aa16.66■□□□□ 0.26
CACNA1A-244ENST00000637625 NOD1Q9Y239 953 aa16.66■□□□□ 0.26
CACNA1A-244ENST00000637625 ACEP12821 1306 aa16.66■□□□□ 0.26
CACNA1A-244ENST00000637625 TLL1O43897 1013 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 ERCC3P19447 782 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 HSPA2P54652 639 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 WBP1LQ9NX94 342 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 BIN2Q9UBW5 565 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 DOLKQ9UPQ8 538 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 INSRP06213 1382 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 COPS2P61201 443 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 ZNF211Q13398 564 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 OXLD1Q5BKU9 147 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 TAS1R3Q7RTX0 852 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 SMG6Q86US8 1419 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
CACNA1A-244ENST00000637625 SFI1A8K8P3 1242 aa16.64■□□□□ 0.25
CACNA1A-244ENST00000637625 GTF2IP78347 998 aa16.64■□□□□ 0.25
CACNA1A-244ENST00000637625 ZBTB33Q86T24 672 aa16.64■□□□□ 0.25
CACNA1A-244ENST00000637625 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
CACNA1A-244ENST00000637625 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
CACNA1A-244ENST00000637625 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.25
CACNA1A-244ENST00000637625 CXXC1Q9P0U4 656 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-244ENST00000637625 NEFLP07196 543 aa16.63■□□□□ 0.25
CACNA1A-244ENST00000637625 ATP1A2P50993 1020 aa16.63■□□□□ 0.25
CACNA1A-244ENST00000637625 ANO2Q9NQ90 1003 aa16.63■□□□□ 0.25
CACNA1A-244ENST00000637625 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
CACNA1A-244ENST00000637625 NWD1Q149M9 1564 aa16.63■□□□□ 0.25
CACNA1A-244ENST00000637625 MAP2P11137 1827 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-244ENST00000637625 ANKRD33BA6NCL7 494 aa16.63■□□□□ 0.25
CACNA1A-244ENST00000637625 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-244ENST00000637625 HS3ST6Q96QI5 342 aa16.63■□□□□ 0.25
CACNA1A-244ENST00000637625 USP6P35125 1406 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms