RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 AIMP1Q12904 312 aaKnown RBP29.74■■■□□ 2.35
CHRNA7-229ENST00000637552 KRT24Q2M2I5 525 aa29.74■■■□□ 2.35
CHRNA7-229ENST00000637552 COPS6Q7L5N1 327 aa29.74■■■□□ 2.35
CHRNA7-229ENST00000637552 ANKRD36CQ5JPF3 1778 aa29.73■■■□□ 2.35
CHRNA7-229ENST00000637552 HSP90AB3PQ58FF7 597 aa29.73■■■□□ 2.35
CHRNA7-229ENST00000637552 XAGE3Q8WTP9 111 aa29.73■■■□□ 2.35
CHRNA7-229ENST00000637552 RBM17Q96I25 401 aaKnown RBP29.73■■■□□ 2.35
CHRNA7-229ENST00000637552 UTP14AQ9BVJ6 771 aaKnown RBP29.73■■■□□ 2.35
CHRNA7-229ENST00000637552 HOXA10P31260 410 aaPredicted RBP29.72■■■□□ 2.35
CHRNA7-229ENST00000637552 CC2D2BQ6DHV5 1058 aa29.72■■■□□ 2.35
CHRNA7-229ENST00000637552 DDX21Q9NR30 783 aaKnown RBP eCLIP29.72■■■□□ 2.35
CHRNA7-229ENST00000637552 IARSP41252 1262 aaKnown RBP29.71■■■□□ 2.35
CHRNA7-229ENST00000637552 SYNE4Q8N205 404 aa29.71■■■□□ 2.35
CHRNA7-229ENST00000637552 IQCA1LA6NCM1 817 aa29.7■■■□□ 2.35
CHRNA7-229ENST00000637552 HDGFL1Q5TGJ6 251 aa29.7■■■□□ 2.35
CHRNA7-229ENST00000637552 KLRG1Q96E93 195 aa29.7■■■□□ 2.35
CHRNA7-229ENST00000637552 NLRP3Q96P20 1036 aa29.7■■■□□ 2.35
CHRNA7-229ENST00000637552 PSMD1Q99460 953 aa29.7■■■□□ 2.35
CHRNA7-229ENST00000637552 HOXB7P09629 217 aa29.69■■■□□ 2.34
CHRNA7-229ENST00000637552 CRAMP1Q96RY5 1269 aa29.69■■■□□ 2.34
CHRNA7-229ENST00000637552 CHPF2Q9P2E5 772 aa29.69■■■□□ 2.34
CHRNA7-229ENST00000637552 RNF123Q5XPI4 1314 aa29.69■■■□□ 2.34
CHRNA7-229ENST00000637552 C3orf67Q6ZVT6 689 aa29.68■■■□□ 2.34
CHRNA7-229ENST00000637552 CFAP44Q96MT7 982 aa29.68■■■□□ 2.34
CHRNA7-229ENST00000637552 ZNF541Q9H0D2 1346 aa29.68■■■□□ 2.34
CHRNA7-229ENST00000637552 SCN4AP35499 1836 aa29.67■■■□□ 2.34
CHRNA7-229ENST00000637552 PPEF1O14829 653 aaPredicted RBP29.67■■■□□ 2.34
CHRNA7-229ENST00000637552 L3MBTL3Q96JM7 780 aaPredicted RBP29.67■■■□□ 2.34
CHRNA7-229ENST00000637552 SNED1Q8TER0 1413 aa29.67■■■□□ 2.34
CHRNA7-229ENST00000637552 GRIPAP1Q4V328 841 aa29.66■■■□□ 2.34
CHRNA7-229ENST00000637552 JDP2Q8WYK2 163 aa29.66■■■□□ 2.34
CHRNA7-229ENST00000637552 TCERG1O14776 1098 aaKnown RBP29.65■■■□□ 2.34
CHRNA7-229ENST00000637552 TCIRG1Q13488 830 aa29.65■■■□□ 2.34
CHRNA7-229ENST00000637552 SLC10A5Q5PT55 438 aa29.65■■■□□ 2.34
CHRNA7-229ENST00000637552 CHADLQ6NUI6 762 aa29.65■■■□□ 2.34
CHRNA7-229ENST00000637552 NLRP10Q86W26 655 aa29.65■■■□□ 2.34
CHRNA7-229ENST00000637552 TMX4Q9H1E5 349 aaPredicted RBP29.65■■■□□ 2.34
CHRNA7-229ENST00000637552 APAF1O14727 1248 aa29.64■■■□□ 2.34
CHRNA7-229ENST00000637552 MBIPQ9NS73 344 aa29.63■■■□□ 2.33
CHRNA7-229ENST00000637552 DBF4Q9UBU7 674 aaPredicted RBP29.63■■■□□ 2.33
CHRNA7-229ENST00000637552 TRMT112Q9UI30 125 aaKnown RBP29.63■■■□□ 2.33
CHRNA7-229ENST00000637552 FZD9O00144 591 aa29.62■■■□□ 2.33
CHRNA7-229ENST00000637552 POTEIP0CG38 1075 aa29.62■■■□□ 2.33
CHRNA7-229ENST00000637552 POTEJP0CG39 1038 aa29.62■■■□□ 2.33
CHRNA7-229ENST00000637552 CALD1Q05682 793 aaKnown RBP29.62■■■□□ 2.33
CHRNA7-229ENST00000637552 DUSP27Q5VZP5 1158 aa29.62■■■□□ 2.33
CHRNA7-229ENST00000637552 PLBD2Q8NHP8 589 aa29.61■■■□□ 2.33
CHRNA7-229ENST00000637552 TAF1DQ9H5J8 278 aaPredicted RBP29.61■■■□□ 2.33
CHRNA7-229ENST00000637552 SH3TC1Q8TE82 1336 aa29.61■■■□□ 2.33
CHRNA7-229ENST00000637552 LAMB2P55268 1798 aa29.6■■■□□ 2.33
CHRNA7-229ENST00000637552 HCLS1P14317 486 aaPredicted RBP29.6■■■□□ 2.33
CHRNA7-229ENST00000637552 HACL1Q9UJ83 578 aa29.6■■■□□ 2.33
CHRNA7-229ENST00000637552 EIF6P56537 245 aaKnown RBP29.59■■■□□ 2.33
CHRNA7-229ENST00000637552 GNAI1P63096 354 aa29.59■■■□□ 2.33
CHRNA7-229ENST00000637552 LDHDQ86WU2 507 aa29.59■■■□□ 2.33
CHRNA7-229ENST00000637552 LARGE2Q8N3Y3 721 aa29.59■■■□□ 2.33
CHRNA7-229ENST00000637552 JMYQ8N9B5 988 aa29.59■■■□□ 2.33
CHRNA7-229ENST00000637552 IFT57Q9NWB7 429 aa29.59■■■□□ 2.33
CHRNA7-229ENST00000637552 HYPKQ9NX55 129 aa29.59■■■□□ 2.33
CHRNA7-229ENST00000637552 ABCC4O15439 1325 aa29.59■■■□□ 2.33
CHRNA7-229ENST00000637552 EAPPQ56P03 285 aaPredicted RBP29.58■■■□□ 2.33
CHRNA7-229ENST00000637552 ANKRD13DQ6ZTN6 518 aa29.58■■■□□ 2.33
CHRNA7-229ENST00000637552 SLC51AQ86UW1 340 aa29.58■■■□□ 2.33
CHRNA7-229ENST00000637552 GPC2Q8N158 579 aa29.58■■■□□ 2.33
CHRNA7-229ENST00000637552 ATP6V0A2Q9Y487 856 aa29.58■■■□□ 2.33
CHRNA7-229ENST00000637552 ZNF853P0CG23 659 aa29.57■■■□□ 2.32
CHRNA7-229ENST00000637552 COL4A5P29400 1685 aa29.56■■■□□ 2.32
CHRNA7-229ENST00000637552 DDX46Q7L014 1031 aaKnown RBP29.56■■■□□ 2.32
CHRNA7-229ENST00000637552 EPHX2P34913 555 aa29.55■■■□□ 2.32
CHRNA7-229ENST00000637552 ZNF428Q96B54 188 aa29.55■■■□□ 2.32
CHRNA7-229ENST00000637552 GJA3Q9Y6H8 435 aa29.55■■■□□ 2.32
CHRNA7-229ENST00000637552 BBOX1O75936 387 aa29.54■■■□□ 2.32
CHRNA7-229ENST00000637552 IFFO2Q5TF58 517 aa29.54■■■□□ 2.32
CHRNA7-229ENST00000637552 PPIP5K2O43314 1243 aa29.53■■■□□ 2.32
CHRNA7-229ENST00000637552 PNMA8AQ86V59 439 aaPredicted RBP29.53■■■□□ 2.32
CHRNA7-229ENST00000637552 NIM1KQ8IY84 436 aa29.53■■■□□ 2.32
CHRNA7-229ENST00000637552 CLEC11AQ9Y240 323 aa29.53■■■□□ 2.32
CHRNA7-229ENST00000637552 ATP5J2-PTCD1G3V325 749 aa29.52■■■□□ 2.32
CHRNA7-229ENST00000637552 SUPT20HQ8NEM7 779 aa29.52■■■□□ 2.32
CHRNA7-229ENST00000637552 ISCA1Q9BUE6 129 aa29.52■■■□□ 2.32
CHRNA7-229ENST00000637552 CREBZFQ9NS37 354 aa29.52■■■□□ 2.32
CHRNA7-229ENST00000637552 ELL2O00472 640 aaPredicted RBP29.51■■■□□ 2.31
CHRNA7-229ENST00000637552 LMOD1P29536 600 aaPredicted RBP29.51■■■□□ 2.31
CHRNA7-229ENST00000637552 ZEB1P37275 1124 aaPredicted RBP29.51■■■□□ 2.31
CHRNA7-229ENST00000637552 GOLGA2Q08379 1002 aa29.51■■■□□ 2.31
CHRNA7-229ENST00000637552 GRAPQ13588 217 aa29.51■■■□□ 2.31
CHRNA7-229ENST00000637552 GRAPLQ8TC17 118 aaPredicted RBP29.51■■■□□ 2.31
CHRNA7-229ENST00000637552 AOC3Q16853 763 aa29.5■■■□□ 2.31
CHRNA7-229ENST00000637552 DPP8Q6V1X1 898 aaPredicted RBP29.5■■■□□ 2.31
CHRNA7-229ENST00000637552 SP8Q8IXZ3 490 aa29.5■■■□□ 2.31
CHRNA7-229ENST00000637552 VPS33BQ9H267 617 aa29.5■■■□□ 2.31
CHRNA7-229ENST00000637552 DDX60Q8IY21 1712 aaKnown RBP29.5■■■□□ 2.31
CHRNA7-229ENST00000637552 PCNTO95613 3336 aa29.5■■■□□ 2.31
CHRNA7-229ENST00000637552 RIC3Q7Z5B4 369 aa29.49■■■□□ 2.31
CHRNA7-229ENST00000637552 ADAMTSL1Q8N6G6 1762 aa29.49■■■□□ 2.31
CHRNA7-229ENST00000637552 MPNDQ8N594 471 aa29.48■■■□□ 2.31
CHRNA7-229ENST00000637552 FAM89AQ96GI7 184 aa29.48■■■□□ 2.31
CHRNA7-229ENST00000637552 PASKQ96RG2 1323 aa29.47■■■□□ 2.31
CHRNA7-229ENST00000637552 TAF1P21675 1872 aa29.47■■■□□ 2.31
CHRNA7-229ENST00000637552 CHMP4AQ9BY43 222 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms