RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 ZNF280CQ8ND82 737 aa3.88□□□□□ -1.79
SCN1A-215ENST00000637285 ANKIB1Q9P2G1 1089 aa3.88□□□□□ -1.79
SCN1A-215ENST00000637285 HCN4Q9Y3Q4 1203 aa3.88□□□□□ -1.79
SCN1A-215ENST00000637285 OAS3Q9Y6K5 1087 aaKnown RBP3.88□□□□□ -1.79
SCN1A-215ENST00000637285 TYRO3Q06418 890 aa3.87□□□□□ -1.79
SCN1A-215ENST00000637285 MSL1Q68DK7 614 aa3.87□□□□□ -1.79
SCN1A-215ENST00000637285 PNMA5Q96PV4 448 aa3.87□□□□□ -1.79
SCN1A-215ENST00000637285 PRM3Q9NNZ6 103 aa3.87□□□□□ -1.79
SCN1A-215ENST00000637285 NAGPAQ9UK23 515 aa3.87□□□□□ -1.79
SCN1A-215ENST00000637285 ALX3O95076 343 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 MED26O95402 600 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 CPB1P15086 417 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 CD97P48960 835 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 GP2P55259 537 aaKnown RBP3.86□□□□□ -1.79
SCN1A-215ENST00000637285 GTF2IP78347 998 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 SEMA3FQ13275 785 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 EML3Q32P44 896 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 IGF2-ASQ6U949 168 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 FAM35AQ86V20 835 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 WFDC8Q8IUA0 241 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 SUSD3Q96L08 255 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 PHACTR1Q9C0D0 580 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 NOD1Q9Y239 953 aa3.86□□□□□ -1.79
SCN1A-215ENST00000637285 ARID1BQ8NFD5 2236 aaPredicted RBP3.85□□□□□ -1.79
SCN1A-215ENST00000637285 PIK3CDO00329 1044 aa3.85□□□□□ -1.79
SCN1A-215ENST00000637285 PTCD1O75127 700 aaKnown RBP3.85□□□□□ -1.79
SCN1A-215ENST00000637285 NFKB1P19838 968 aa3.85□□□□□ -1.79
SCN1A-215ENST00000637285 EPHA4P54764 986 aa3.85□□□□□ -1.79
SCN1A-215ENST00000637285 C1orf53Q5VUE5 145 aa3.85□□□□□ -1.79
SCN1A-215ENST00000637285 ILDR2Q71H61 639 aa3.85□□□□□ -1.79
SCN1A-215ENST00000637285 DTWD1Q8N5C7 304 aa3.85□□□□□ -1.79
SCN1A-215ENST00000637285 AKTIPQ9H8T0 292 aa3.85□□□□□ -1.79
SCN1A-215ENST00000637285 CHMP3Q9Y3E7 222 aa3.85□□□□□ -1.79
SCN1A-215ENST00000637285 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.85□□□□□ -1.79
SCN1A-215ENST00000637285 TGFB1P01137 390 aa3.84□□□□□ -1.79
SCN1A-215ENST00000637285 SKIP12755 728 aa3.84□□□□□ -1.79
SCN1A-215ENST00000637285 ABL2P42684 1182 aa3.84□□□□□ -1.79
SCN1A-215ENST00000637285 PLAURQ03405 335 aa3.84□□□□□ -1.79
SCN1A-215ENST00000637285 NEUROD2Q15784 382 aa3.84□□□□□ -1.79
SCN1A-215ENST00000637285 SLC51AQ86UW1 340 aa3.84□□□□□ -1.79
SCN1A-215ENST00000637285 DEAF1O75398 565 aaPredicted RBP3.83□□□□□ -1.8
SCN1A-215ENST00000637285 BRPF1P55201 1214 aaPredicted RBP3.83□□□□□ -1.8
SCN1A-215ENST00000637285 PSMA6P60900 246 aaKnown RBP3.83□□□□□ -1.8
SCN1A-215ENST00000637285 MLLT1Q03111 559 aaPredicted RBP3.83□□□□□ -1.8
SCN1A-215ENST00000637285 GRIK5Q16478 980 aa3.83□□□□□ -1.8
SCN1A-215ENST00000637285 ELMSAN1Q6PJG2 1045 aa3.83□□□□□ -1.8
SCN1A-215ENST00000637285 BTLAQ7Z6A9 289 aa3.83□□□□□ -1.8
SCN1A-215ENST00000637285 DZIP1LQ8IYY4 767 aaKnown RBP3.83□□□□□ -1.8
SCN1A-215ENST00000637285 LPIN3Q9BQK8 851 aa3.83□□□□□ -1.8
SCN1A-215ENST00000637285 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
SCN1A-215ENST00000637285 GSX2Q9BZM3 304 aa3.83□□□□□ -1.8
SCN1A-215ENST00000637285 TSPAN10Q9H1Z9 355 aaPredicted RBP3.83□□□□□ -1.8
SCN1A-215ENST00000637285 GDPD2Q9HCC8 539 aa3.83□□□□□ -1.8
SCN1A-215ENST00000637285 KIAA1324LA8MWY0 1029 aaPredicted RBP3.82□□□□□ -1.8
SCN1A-215ENST00000637285 ADAMTS4O75173 837 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 IGLV1-40P01703 118 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 GLB1P16278 677 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 NCOA4Q13772 614 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 CCINQ13939 588 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 PCSK7Q16549 785 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 PERM1Q5SV97 790 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 KRT25Q7Z3Z0 450 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 DEPDC4Q8N2C3 294 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 NGLY1Q96IV0 654 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 EFCC1Q9HA90 598 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 RAXQ9Y2V3 346 aa3.82□□□□□ -1.8
SCN1A-215ENST00000637285 F8W735 103 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-215ENST00000637285 DLL1O00548 723 aa3.81□□□□□ -1.8
SCN1A-215ENST00000637285 PPP1R12BO60237 982 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-215ENST00000637285 WASHC4Q2M389 1173 aa3.81□□□□□ -1.8
SCN1A-215ENST00000637285 AGGF1Q8N302 714 aaeCLIP3.81□□□□□ -1.8
SCN1A-215ENST00000637285 TPCN2Q8NHX9 752 aa3.81□□□□□ -1.8
SCN1A-215ENST00000637285 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
SCN1A-215ENST00000637285 MRPL18Q9H0U6 180 aaKnown RBP3.81□□□□□ -1.8
SCN1A-215ENST00000637285 FRRS1LQ9P0K9 344 aa3.81□□□□□ -1.8
SCN1A-215ENST00000637285 STOML1Q9UBI4 398 aa3.81□□□□□ -1.8
SCN1A-215ENST00000637285 ZBTB42B2RXF5 422 aa3.8□□□□□ -1.8
SCN1A-215ENST00000637285 GSC2O15499 205 aa3.8□□□□□ -1.8
SCN1A-215ENST00000637285 SOX11P35716 441 aa3.8□□□□□ -1.8
SCN1A-215ENST00000637285 HIRAP54198 1017 aaPredicted RBP3.8□□□□□ -1.8
SCN1A-215ENST00000637285 HFE2Q6ZVN8 426 aa3.8□□□□□ -1.8
SCN1A-215ENST00000637285 ALDH16A1Q8IZ83 802 aa3.8□□□□□ -1.8
SCN1A-215ENST00000637285 SMG9Q9H0W8 520 aaKnown RBP3.8□□□□□ -1.8
SCN1A-215ENST00000637285 LZTS3O60299 673 aaPredicted RBP3.79□□□□□ -1.8
SCN1A-215ENST00000637285 EIF2AK2P19525 551 aaKnown RBP3.79□□□□□ -1.8
SCN1A-215ENST00000637285 GRIK1P39086 918 aa3.79□□□□□ -1.8
SCN1A-215ENST00000637285 JAG1P78504 1218 aa3.79□□□□□ -1.8
SCN1A-215ENST00000637285 CCDC102BQ68D86 513 aa3.79□□□□□ -1.8
SCN1A-215ENST00000637285 DHX32Q7L7V1 743 aaKnown RBP3.79□□□□□ -1.8
SCN1A-215ENST00000637285 TMEM130Q8N3G9 435 aa3.79□□□□□ -1.8
SCN1A-215ENST00000637285 CHMP7Q8WUX9 453 aaPredicted RBP3.79□□□□□ -1.8
SCN1A-215ENST00000637285 USP17L5A8MUK1 530 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 MAP3K6O95382 1288 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 WNT11O96014 354 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 SPINK2P20155 84 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 TARSP26639 723 aaKnown RBP3.78□□□□□ -1.8
SCN1A-215ENST00000637285 HIF1AQ16665 826 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 GDF6Q6KF10 455 aaPredicted RBP3.78□□□□□ -1.8
SCN1A-215ENST00000637285 INTS5Q6P9B9 1019 aaKnown RBP3.78□□□□□ -1.8
SCN1A-215ENST00000637285 TRIM50Q86XT4 487 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms