RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ZKSCAN1P17029 563 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 CDC25BP30305 580 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 HSP90AB2PQ58FF8 381 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 PPP1R42Q7Z4L9 355 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 ZNF397Q8NF99 534 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 CERKQ8TCT0 537 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 KCNB2Q92953 911 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 GLRX3O76003 335 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 ZNF165P49910 485 aa18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 HSP90AB4PQ58FF6 505 aa18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 CLSTN2Q9H4D0 955 aa18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 TTC21AQ8NDW8 1320 aa18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 ME3Q16798 604 aa18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 UBAP1LF5GYI3 381 aa18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 FOXO3O43524 673 aa18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 CACTINQ8WUQ7 758 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-235ENST00000637004 SPATA32Q96LK8 384 aa18.4■□□□□ 0.54
CACNA1A-235ENST00000637004 USP42Q9H9J4 1324 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-235ENST00000637004 TERF2Q15554 542 aa18.4■□□□□ 0.54
CACNA1A-235ENST00000637004 ADCK5Q3MIX3 580 aa18.4■□□□□ 0.54
CACNA1A-235ENST00000637004 ATF3P18847 181 aa18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 ST3GAL1Q11201 340 aa18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 XRN1Q8IZH2 1706 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 NAA30Q147X3 362 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 CDC37L1Q7L3B6 337 aa18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 FERMT3Q86UX7 667 aa18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 ZNF592Q92610 1267 aa18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 ORAI2Q96SN7 254 aa18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 C19orf44Q9H6X5 657 aa18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 CHD2O14647 1828 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-235ENST00000637004 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
CACNA1A-235ENST00000637004 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
CACNA1A-235ENST00000637004 FAM193AP78312 1265 aa18.38■□□□□ 0.53
CACNA1A-235ENST00000637004 NECAB1Q8N987 351 aa18.38■□□□□ 0.53
CACNA1A-235ENST00000637004 PTH1RQ03431 593 aa18.38■□□□□ 0.53
CACNA1A-235ENST00000637004 PSMA5P28066 241 aa18.37■□□□□ 0.53
CACNA1A-235ENST00000637004 PTPN14Q15678 1187 aa18.37■□□□□ 0.53
CACNA1A-235ENST00000637004 LTBP4Q8N2S1 1624 aa18.37■□□□□ 0.53
CACNA1A-235ENST00000637004 ADGRL3Q9HAR2 1447 aa18.37■□□□□ 0.53
CACNA1A-235ENST00000637004 RBM6P78332 1123 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-235ENST00000637004 ANKRD1Q15327 319 aa18.37■□□□□ 0.53
CACNA1A-235ENST00000637004 NECTIN2Q92692 538 aa18.37■□□□□ 0.53
CACNA1A-235ENST00000637004 TPCN1Q9ULQ1 816 aa18.37■□□□□ 0.53
CACNA1A-235ENST00000637004 RGPD1P0DJD0 1748 aa18.37■□□□□ 0.53
CACNA1A-235ENST00000637004 GOLGA6L19H0YKK7 550 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 NECTIN1Q15223 517 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 SARM1Q6SZW1 724 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 LRRC8AQ8IWT6 810 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 LEO1Q8WVC0 666 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 SIRT1Q96EB6 747 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 SLFNL1Q499Z3 407 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 ESCO1Q5FWF5 840 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 CREBRFQ8IUR6 639 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 ERO1AQ96HE7 468 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 DNAJC25Q9H1X3 360 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 DIP2AQ14689 1571 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 AKAP12Q02952 1782 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 OVOS2A0A0J9YW53 1432 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 OVOS2Q6IE36 1432 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 FAM173BQ6P4H8 233 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 BICD2Q8TD16 824 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 MRFAP1L1Q96HT8 127 aa18.36■□□□□ 0.53
CACNA1A-235ENST00000637004 CCDC144BQ3MJ40 725 aa18.35■□□□□ 0.53
CACNA1A-235ENST00000637004 KMT5BQ4FZB7 885 aa18.35■□□□□ 0.53
CACNA1A-235ENST00000637004 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
CACNA1A-235ENST00000637004 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
CACNA1A-235ENST00000637004 ZNF215Q9UL58 517 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-235ENST00000637004 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
CACNA1A-235ENST00000637004 DTNBO60941 627 aa18.35■□□□□ 0.53
CACNA1A-235ENST00000637004 KCNJ4P48050 445 aa18.35■□□□□ 0.53
CACNA1A-235ENST00000637004 NYAP1Q6ZVC0 841 aa18.35■□□□□ 0.53
CACNA1A-235ENST00000637004 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
CACNA1A-235ENST00000637004 TFIP11Q9UBB9 837 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-235ENST00000637004 KDRP35968 1356 aa18.34■□□□□ 0.53
CACNA1A-235ENST00000637004 KIF2AO00139 706 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-235ENST00000637004 CLASRPQ8N2M8 674 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-235ENST00000637004 BABAM1Q9NWV8 329 aa18.34■□□□□ 0.53
CACNA1A-235ENST00000637004 FAM53CQ9NYF3 392 aa18.34■□□□□ 0.53
CACNA1A-235ENST00000637004 FAM208AQ9UK61 1670 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-235ENST00000637004 NR1I2O75469 434 aa18.33■□□□□ 0.53
CACNA1A-235ENST00000637004 OS9Q13438 667 aaPredicted RBP18.33■□□□□ 0.53
CACNA1A-235ENST00000637004 CREB3L3Q68CJ9 461 aa18.33■□□□□ 0.53
CACNA1A-235ENST00000637004 ECHDC1Q9NTX5 307 aa18.33■□□□□ 0.53
CACNA1A-235ENST00000637004 TMEM51Q9NW97 253 aa18.33■□□□□ 0.53
CACNA1A-235ENST00000637004 SLAIN2Q9P270 581 aa18.33■□□□□ 0.53
CACNA1A-235ENST00000637004 SKILP12757 684 aa18.33■□□□□ 0.52
CACNA1A-235ENST00000637004 RBM8AQ9Y5S9 174 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-235ENST00000637004 USP31Q70CQ4 1352 aa18.33■□□□□ 0.52
CACNA1A-235ENST00000637004 HIP1O00291 1037 aa18.32■□□□□ 0.52
CACNA1A-235ENST00000637004 EVI5LQ96CN4 794 aa18.32■□□□□ 0.52
CACNA1A-235ENST00000637004 N4BP2Q86UW6 1770 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-235ENST00000637004 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
CACNA1A-235ENST00000637004 GIGYF1O75420 1035 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-235ENST00000637004 PRR36Q9H6K5 1346 aa18.32■□□□□ 0.52
CACNA1A-235ENST00000637004 TECPR2O15040 1411 aa18.32■□□□□ 0.52
CACNA1A-235ENST00000637004 TIGD1Q96MW7 591 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms