RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 NYXQ9GZU5 481 aa20.29■□□□□ 0.84
CLN6-216ENST00000636876 CWC25Q9NXE8 425 aaPredicted RBP20.29■□□□□ 0.84
CLN6-216ENST00000636876 TNNQ9UQP3 1299 aa20.29■□□□□ 0.84
CLN6-216ENST00000636876 ABCC4O15439 1325 aa20.28■□□□□ 0.84
CLN6-216ENST00000636876 CNBD1Q8NA66 436 aa20.28■□□□□ 0.84
CLN6-216ENST00000636876 UTP14AQ9BVJ6 771 aaKnown RBP20.28■□□□□ 0.84
CLN6-216ENST00000636876 SRCIN1Q9C0H9 1055 aa20.28■□□□□ 0.84
CLN6-216ENST00000636876 ALDH1L1O75891 902 aa20.27■□□□□ 0.84
CLN6-216ENST00000636876 PRR5LQ6MZQ0 368 aa20.27■□□□□ 0.84
CLN6-216ENST00000636876 TPTE2Q6XPS3 522 aa20.27■□□□□ 0.84
CLN6-216ENST00000636876 RNF123Q5XPI4 1314 aa20.27■□□□□ 0.83
CLN6-216ENST00000636876 NPHP1O15259 732 aa20.26■□□□□ 0.83
CLN6-216ENST00000636876 CCT4P50991 539 aaKnown RBP20.26■□□□□ 0.83
CLN6-216ENST00000636876 GCKRQ14397 625 aa20.26■□□□□ 0.83
CLN6-216ENST00000636876 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
CLN6-216ENST00000636876 CLUAP1Q96AJ1 413 aa20.26■□□□□ 0.83
CLN6-216ENST00000636876 TRMT112Q9UI30 125 aaKnown RBP20.26■□□□□ 0.83
CLN6-216ENST00000636876 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
CLN6-216ENST00000636876 PLIN1O60240 522 aa20.25■□□□□ 0.83
CLN6-216ENST00000636876 DZIP1LQ8IYY4 767 aaKnown RBP20.25■□□□□ 0.83
CLN6-216ENST00000636876 C10orf71Q711Q0 1435 aa20.25■□□□□ 0.83
CLN6-216ENST00000636876 PCCAP05165 728 aaPredicted RBP20.24■□□□□ 0.83
CLN6-216ENST00000636876 GTF2E1P29083 439 aaPredicted RBP20.24■□□□□ 0.83
CLN6-216ENST00000636876 ST5P78524 1137 aa20.24■□□□□ 0.83
CLN6-216ENST00000636876 ERFEQ4G0M1 354 aa20.24■□□□□ 0.83
CLN6-216ENST00000636876 INTS3Q68E01 1043 aaKnown RBP20.24■□□□□ 0.83
CLN6-216ENST00000636876 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
CLN6-216ENST00000636876 SH3TC1Q8TE82 1336 aa20.24■□□□□ 0.83
CLN6-216ENST00000636876 ABCC12Q96J65 1359 aa20.23■□□□□ 0.83
CLN6-216ENST00000636876 MS4A1P11836 297 aa20.23■□□□□ 0.83
CLN6-216ENST00000636876 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
CLN6-216ENST00000636876 CCDC24Q8N4L8 307 aa20.23■□□□□ 0.83
CLN6-216ENST00000636876 ZBTB38Q8NAP3 1195 aaPredicted RBP20.23■□□□□ 0.83
CLN6-216ENST00000636876 FAM89AQ96GI7 184 aa20.23■□□□□ 0.83
CLN6-216ENST00000636876 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
CLN6-216ENST00000636876 RLBP1P12271 317 aa20.22■□□□□ 0.83
CLN6-216ENST00000636876 RRP1P56182 461 aaKnown RBP20.22■□□□□ 0.83
CLN6-216ENST00000636876 SYNE4Q8N205 404 aa20.22■□□□□ 0.83
CLN6-216ENST00000636876 RIC1Q4ADV7 1423 aa20.21■□□□□ 0.83
CLN6-216ENST00000636876 KIF13BQ9NQT8 1826 aa20.21■□□□□ 0.83
CLN6-216ENST00000636876 H7C1W4 665 aa20.21■□□□□ 0.83
CLN6-216ENST00000636876 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
CLN6-216ENST00000636876 TMEM57Q8N5G2 664 aa20.21■□□□□ 0.83
CLN6-216ENST00000636876 BRIP1Q9BX63 1249 aa20.21■□□□□ 0.83
CLN6-216ENST00000636876 FHDC1Q9C0D6 1143 aaPredicted RBP20.21■□□□□ 0.83
CLN6-216ENST00000636876 ANKRD31Q8N7Z5 1873 aa20.2■□□□□ 0.82
CLN6-216ENST00000636876 GRM8O00222 908 aa20.2■□□□□ 0.82
CLN6-216ENST00000636876 SLC10A5Q5PT55 438 aa20.2■□□□□ 0.82
CLN6-216ENST00000636876 UBE3BQ7Z3V4 1068 aa20.2■□□□□ 0.82
CLN6-216ENST00000636876 PANK1Q8TE04 598 aa20.2■□□□□ 0.82
CLN6-216ENST00000636876 JARID2Q92833 1246 aaPredicted RBP20.2■□□□□ 0.82
CLN6-216ENST00000636876 C9orf78Q9NZ63 289 aaPredicted RBP20.2■□□□□ 0.82
CLN6-216ENST00000636876 CD2APQ9Y5K6 639 aa20.2■□□□□ 0.82
CLN6-216ENST00000636876 CDHR2Q9BYE9 1310 aa20.2■□□□□ 0.82
CLN6-216ENST00000636876 UTRNP46939 3433 aa20.2■□□□□ 0.82
CLN6-216ENST00000636876 IRS4O14654 1257 aaPredicted RBP20.19■□□□□ 0.82
CLN6-216ENST00000636876 CASP7P55210 303 aa20.19■□□□□ 0.82
CLN6-216ENST00000636876 PDE3AQ14432 1141 aa20.19■□□□□ 0.82
CLN6-216ENST00000636876 HCLS1P14317 486 aaPredicted RBP20.18■□□□□ 0.82
CLN6-216ENST00000636876 KLHL34Q8N239 644 aa20.18■□□□□ 0.82
CLN6-216ENST00000636876 SYT17Q9BSW7 474 aa20.18■□□□□ 0.82
CLN6-216ENST00000636876 USP44Q9H0E7 712 aa20.18■□□□□ 0.82
CLN6-216ENST00000636876 UTYO14607 1347 aa20.18■□□□□ 0.82
CLN6-216ENST00000636876 DDX60Q8IY21 1712 aaKnown RBP20.17■□□□□ 0.82
CLN6-216ENST00000636876 LAMB2P55268 1798 aa20.17■□□□□ 0.82
CLN6-216ENST00000636876 HSP90B1P14625 803 aaKnown RBP20.17■□□□□ 0.82
CLN6-216ENST00000636876 PDE6BP35913 854 aa20.17■□□□□ 0.82
CLN6-216ENST00000636876 C20orf194Q5TEA3 1177 aa20.17■□□□□ 0.82
CLN6-216ENST00000636876 TNRC6CQ9HCJ0 1690 aaKnown RBP20.16■□□□□ 0.82
CLN6-216ENST00000636876 CENPBP07199 599 aaPredicted RBP20.16■□□□□ 0.82
CLN6-216ENST00000636876 ITPRIPQ8IWB1 547 aa20.16■□□□□ 0.82
CLN6-216ENST00000636876 SUPT16HQ9Y5B9 1047 aaKnown RBP20.16■□□□□ 0.82
CLN6-216ENST00000636876 KLRG2A4D1S0 409 aaPredicted RBP20.15■□□□□ 0.82
CLN6-216ENST00000636876 PDE8AO60658 829 aa20.15■□□□□ 0.82
CLN6-216ENST00000636876 NBPF7P0C2Y1 421 aaPredicted RBP20.15■□□□□ 0.82
CLN6-216ENST00000636876 TGFB2P61812 414 aa20.15■□□□□ 0.82
CLN6-216ENST00000636876 C3orf67Q6ZVT6 689 aa20.15■□□□□ 0.82
CLN6-216ENST00000636876 NLRP3Q96P20 1036 aa20.15■□□□□ 0.82
CLN6-216ENST00000636876 PDZRN3Q9UPQ7 1066 aa20.15■□□□□ 0.82
CLN6-216ENST00000636876 KIAA1551Q9HCM1 1747 aa20.14■□□□□ 0.81
CLN6-216ENST00000636876 C2CD5Q86YS7 1000 aa20.14■□□□□ 0.81
CLN6-216ENST00000636876 MEIS3Q99687 375 aa20.14■□□□□ 0.81
CLN6-216ENST00000636876 PLA2G12BQ9BX93 195 aa20.14■□□□□ 0.81
CLN6-216ENST00000636876 MVPQ14764 893 aaKnown RBP20.13■□□□□ 0.81
CLN6-216ENST00000636876 CRY2Q49AN0 593 aa20.13■□□□□ 0.81
CLN6-216ENST00000636876 NLGN2Q8NFZ4 835 aa20.13■□□□□ 0.81
CLN6-216ENST00000636876 COG6Q9Y2V7 657 aa20.13■□□□□ 0.81
CLN6-216ENST00000636876 COL11A2P13942 1736 aaPredicted RBP20.13■□□□□ 0.81
CLN6-216ENST00000636876 H0YIN7 160 aa20.12■□□□□ 0.81
CLN6-216ENST00000636876 GNAI3P08754 354 aa20.12■□□□□ 0.81
CLN6-216ENST00000636876 UBTFL1P0CB47 393 aaPredicted RBP20.12■□□□□ 0.81
CLN6-216ENST00000636876 DPEP1P16444 411 aa20.12■□□□□ 0.81
CLN6-216ENST00000636876 CHRNA5P30532 468 aa20.12■□□□□ 0.81
CLN6-216ENST00000636876 SUCLG2Q96I99 432 aa20.12■□□□□ 0.81
CLN6-216ENST00000636876 A0A0G2JLW4 131 aa20.11■□□□□ 0.81
CLN6-216ENST00000636876 SRGNP10124 158 aa20.11■□□□□ 0.81
CLN6-216ENST00000636876 CTSWP56202 376 aa20.11■□□□□ 0.81
CLN6-216ENST00000636876 SF3B3Q15393 1217 aaKnown RBP20.11■□□□□ 0.81
CLN6-216ENST00000636876 MYH3P11055 1940 aa20.11■□□□□ 0.81
CLN6-216ENST00000636876 ZBTB7BO15156 539 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms