RNA–Protein interactions for RNA: ENST00000636633.1

CACNA1D-216, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-216ENST00000636633 KIAA0232Q92628 1395 aa10.62□□□□□ -0.71
CACNA1D-216ENST00000636633 USP5P45974 858 aa10.62□□□□□ -0.71
CACNA1D-216ENST00000636633 CCT2P78371 535 aaKnown RBP10.62□□□□□ -0.71
CACNA1D-216ENST00000636633 PLBD2Q8NHP8 589 aa10.62□□□□□ -0.71
CACNA1D-216ENST00000636633 SPATA32Q96LK8 384 aa10.62□□□□□ -0.71
CACNA1D-216ENST00000636633 NLRP3Q96P20 1036 aa10.62□□□□□ -0.71
CACNA1D-216ENST00000636633 TCEAL9Q9UHQ7 104 aa10.62□□□□□ -0.71
CACNA1D-216ENST00000636633 TFCP2Q12800 502 aa10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 SH2B1Q9NRF2 756 aaPredicted RBP10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 E9PCH4 1651 aa10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 CDKL5O76039 1030 aa10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 TIMM10P62072 90 aa10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 GUCY1B3Q02153 619 aa10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 FAM98CQ17RN3 349 aaKnown RBP10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 ANKRD18AQ8IVF6 992 aa10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 RANBP6O60518 1105 aaKnown RBP10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 HMGB2P26583 209 aaKnown RBP10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 TNPO1Q92973 898 aaKnown RBP10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 ZNF335Q9H4Z2 1342 aaPredicted RBP10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 UTP14AQ9BVJ6 771 aaKnown RBP10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 RBM8AQ9Y5S9 174 aaKnown RBP10.61□□□□□ -0.71
CACNA1D-216ENST00000636633 JMYQ8N9B5 988 aa10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 USP44Q9H0E7 712 aa10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 HMGB1P09429 215 aaKnown RBP10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 TTF1Q15361 905 aaPredicted RBP10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 NEK1Q96PY6 1258 aa10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 LRRC2Q9BYS8 371 aa10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 POLR3DP05423 398 aaPredicted RBP10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 TSR1Q2NL82 804 aaKnown RBP10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 SUCLG2Q96I99 432 aa10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 TSPY26PQ9H489 355 aa10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 MKNK2Q9HBH9 465 aa10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 GDPD2Q9HCC8 539 aa10.6□□□□□ -0.71
CACNA1D-216ENST00000636633 CEP152O94986 1710 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 TPM3P06753 285 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 RAB11FIP4Q86YS3 637 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 CFAP45Q9UL16 551 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 IFIT3O14879 490 aaKnown RBP10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 TPM1P09493 284 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 GCKRQ14397 625 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 ANKRD20A12PQ8NF67 263 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 RTCBQ9Y3I0 505 aaKnown RBP10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 ABCC4O15439 1325 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 TTC41PQ6P2S7 1318 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 UQCRFS1P1P0C7P4 283 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 CHMLP26374 656 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 NMIQ13287 307 aaPredicted RBP10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 SLC9C2Q5TAH2 1124 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 MPNDQ8N594 471 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 PCMTD1Q96MG8 357 aaPredicted RBP10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 TRIM5Q9C035 493 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 TNMDQ9H2S6 317 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 ALKQ9UM73 1620 aa10.59□□□□□ -0.71
CACNA1D-216ENST00000636633 HCLS1P14317 486 aaPredicted RBP10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 NECAB1Q8N987 351 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 BRF1Q92994 677 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 CDCA7Q9BWT1 371 aaPredicted RBP10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 ZNF594Q96JF6 807 aaPredicted RBP10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 ERBB3P21860 1342 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 SETD1BQ9UPS6 1966 aaKnown RBP10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 GOLGA8BA8MQT2 603 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 LETM1O95202 739 aaPredicted RBP10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 MCMDC2Q4G0Z9 681 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 OLFM4Q6UX06 510 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 TPTE2Q6XPS3 522 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 NAT10Q9H0A0 1025 aaKnown RBP10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 GNPATO15228 680 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 SLC4A8Q2Y0W8 1093 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 IQCA1Q86XH1 822 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
CACNA1D-216ENST00000636633 GLI2P10070 1586 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 ZNF592Q92610 1267 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 DBNDD2Q9BQY9 259 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 ADGRB3O60242 1522 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 TPM2P07951 284 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 ZNF622Q969S3 477 aaKnown RBP eCLIP10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 C8orf76Q96K31 380 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 HMG20BQ9P0W2 317 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 TFIP11Q9UBB9 837 aaKnown RBP10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 MADDQ8WXG6 1647 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 ERVV-2B6SEH9 535 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 ZFYP08048 801 aaPredicted RBP10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 PROSER3Q2NL68 480 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 MICU3Q86XE3 530 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 CCDC144CPQ8IYA2 1237 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 DIP2CQ9Y2E4 1556 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 SH3TC1Q8TE82 1336 aa10.57□□□□□ -0.72
CACNA1D-216ENST00000636633 EYA2O00167 538 aa10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 CCDC192P0DO97 292 aa10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 GJB2P29033 226 aa10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 CCDC43Q96MW1 224 aaKnown RBP10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 SLC12A7Q9Y666 1083 aa10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 SYCE3A1L190 88 aa10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 PDIA4P13667 645 aaKnown RBP10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 RNF41Q9H4P4 317 aaPredicted RBP10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 A0A1B0GUL7 405 aa10.56□□□□□ -0.72
CACNA1D-216ENST00000636633 ZNF853P0CG23 659 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms