RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 PLEKHG3A1L390 1219 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ADM5C9JUS6 153 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 SMIM22K7EJ46 135 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 FZD9O00144 591 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ALDH1A1P00352 501 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ITGB8P26012 769 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 BMP8BP34820 402 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ITGAEP38570 1179 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 MAGEA10P43363 369 aaPredicted RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 MRPS5P82675 430 aaKnown RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ARHGEF6Q15052 776 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 CSPP1Q1MSJ5 1256 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 NOM1Q5C9Z4 860 aaKnown RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 KANK4Q5T7N3 995 aaPredicted RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 FAM109BQ6ICB4 259 aaPredicted RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 DLK2Q6UY11 383 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 NIM1KQ8IY84 436 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 LARGE2Q8N3Y3 721 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ATXN2LQ8WWM7 1075 aaKnown RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 DCPSQ96C86 337 aaKnown RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 NECAB3Q96P71 396 aaPredicted RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ASB2Q96Q27 587 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 EPHX3Q9H6B9 360 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 C14orf93Q9H972 538 aaKnown RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 GPRC5DQ9NZD1 345 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 BIN2Q9UBW5 565 aaPredicted RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ASAP1Q9ULH1 1129 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 PDZRN3Q9UPQ7 1066 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 PTCH2Q9Y6C5 1203 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 PIEZO1Q92508 2521 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ANKRD31Q8N7Z5 1873 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 NRXN2Q9P2S2 1712 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 TTC28Q96AY4 2481 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 MUC6Q6W4X9 2439 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 ROCK1Q13464 1354 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 WASHC2AQ641Q2 1341 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 TCF20Q9UGU0 1960 aaKnown RBP2.53□□□□□ -2
SYNGAP1-215ENST00000636443 RANBP2P49792 3224 aaKnown RBP2.53□□□□□ -2
SYNGAP1-215ENST00000636443 POTEB2H3BUK9 544 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 TM4SF1P30408 202 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 ST5P78524 1137 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 APLP2Q06481 763 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 TCIRG1Q13488 830 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 NFIXQ14938 502 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 RC3H1Q5TC82 1133 aaKnown RBP2.53□□□□□ -2
SYNGAP1-215ENST00000636443 STYK1Q6J9G0 422 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 ERMP1Q7Z2K6 904 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 SULF1Q8IWU6 871 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 RTKN2Q8IZC4 609 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 USHBP1Q8N6Y0 703 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 USP38Q8NB14 1042 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 ZC3H15Q8WU90 426 aaKnown RBP2.53□□□□□ -2
SYNGAP1-215ENST00000636443 SHISA4Q96DD7 197 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 GDF15Q99988 308 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 R3HDMLQ9H3Y0 253 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 TJP1Q07157 1748 aa2.53□□□□□ -2
SYNGAP1-215ENST00000636443 LAMA2P24043 3122 aaKnown RBP2.53□□□□□ -2.01
SYNGAP1-215ENST00000636443 MRC1P22897 1456 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 BRCA2P51587 3418 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 LAMB2P55268 1798 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 CGNL1Q0VF96 1302 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 H7C1D1 291 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 GFRA3O60609 400 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 RGS20O76081 388 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 TFRCP02786 760 aaKnown RBP2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 CRKLP46109 303 aaKnown RBP2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 TM4SF4P48230 202 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 GMPSP49915 693 aaPredicted RBP2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 MDM2Q00987 491 aaPredicted RBP2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 SP3Q02447 781 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 PRKG1Q13976 671 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 RBM26Q5T8P6 1007 aaKnown RBP2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 OLFM4Q6UX06 510 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 TRPM4Q8TD43 1214 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 CDCA5Q96FF9 252 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 MASTLQ96GX5 879 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 SLC4A1APQ9BWU0 796 aaKnown RBP2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 BRIP1Q9BX63 1249 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 RNF208Q9H0X6 261 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 TSPYL2Q9H2G4 693 aaPredicted RBP2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 SEMA6BQ9H3T3 888 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 CABP1Q9NZU7 370 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZBTB12Q9Y330 459 aaPredicted RBP2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 CACNA1BQ00975 2339 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 CD163L1Q9NR16 1453 aa2.52□□□□□ -2.01
SYNGAP1-215ENST00000636443 PRUNE2Q8WUY3 3088 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 TTC21BQ7Z4L5 1316 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 POLR2AP24928 1970 aaKnown RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 MYH14Q7Z406 1995 aaKnown RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 ALPK3Q96L96 1907 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 UBE2Q2LH0YL09 131 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 PPIP5K2O43314 1243 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 GPR37L1O60883 481 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 PTCD1O75127 700 aaKnown RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 CCL5P13501 91 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 ID4P47928 161 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 GJA8P48165 433 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 AMPHP49418 695 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 UBXN2AP68543 259 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms