RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TCHPQ9BT92 498 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 CRNKL1Q9BZJ0 848 aaKnown RBP6.35□□□□□ -1.39
SCN1A-209ENST00000635750 NOD1Q9Y239 953 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 DYNC1I1O14576 645 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 GLRX3O76003 335 aaKnown RBP6.35□□□□□ -1.39
SCN1A-209ENST00000635750 MAATS1Q7Z4T9 603 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 PFDN4Q9NQP4 134 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 DPH6Q7L8W6 267 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 SIRT1Q96EB6 747 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 FAM169AQ9Y6X4 670 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 GSDMBQ8TAX9 411 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 CCDC77Q9BR77 488 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 RMND1Q9NWS8 449 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 GOLGA8AA7E2F4 631 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 GOLGA8BA8MQT2 603 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 GOLGA1Q92805 767 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 FAM212AQ96EL1 285 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 MYD88Q99836 296 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 RPGRIP1LQ68CZ1 1315 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 HSF2BPO75031 334 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 IDEP14735 1019 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 NCAPGQ9BPX3 1015 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 CGNQ9P2M7 1197 aaKnown RBP6.34□□□□□ -1.39
SCN1A-209ENST00000635750 TSPY3P0CV98 308 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 TSPY8P0CW00 308 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 C6orf50Q9HD87 102 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 TSHZ2Q9NRE2 1034 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 CCDC160A6NGH7 325 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 ERICH4A6NGS2 130 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.34□□□□□ -1.39
SCN1A-209ENST00000635750 JAKMIP2Q96AA8 810 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 GPHNQ9NQX3 736 aaPredicted RBP6.34□□□□□ -1.39
SCN1A-209ENST00000635750 HYPKQ9NX55 129 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 BRD4O60885 1362 aaPredicted RBP6.34□□□□□ -1.39
SCN1A-209ENST00000635750 RBM25P49756 843 aaKnown RBP6.34□□□□□ -1.39
SCN1A-209ENST00000635750 NFE2L2Q16236 605 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 MFSD6Q6ZSS7 791 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 CHD1LQ86WJ1 897 aa6.34□□□□□ -1.39
SCN1A-209ENST00000635750 GOLGA6L9A6NEM1 432 aa6.34□□□□□ -1.4
SCN1A-209ENST00000635750 FAM13AO94988 1023 aa6.34□□□□□ -1.4
SCN1A-209ENST00000635750 CFAP157Q5JU67 520 aa6.34□□□□□ -1.4
SCN1A-209ENST00000635750 WDR63Q8IWG1 891 aa6.34□□□□□ -1.4
SCN1A-209ENST00000635750 TBC1D31Q96DN5 1066 aa6.34□□□□□ -1.4
SCN1A-209ENST00000635750 SCAND2PQ9GZW5 306 aaPredicted RBP6.34□□□□□ -1.4
SCN1A-209ENST00000635750 JADE2Q9NQC1 790 aa6.34□□□□□ -1.4
SCN1A-209ENST00000635750 OPA1O60313 960 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 NBPF7P0C2Y1 421 aaPredicted RBP6.33□□□□□ -1.4
SCN1A-209ENST00000635750 ALDH3A1P30838 453 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 PDE3AQ14432 1141 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 GEN1Q17RS7 908 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 JDP2Q8WYK2 163 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 FAM114A2Q9NRY5 505 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 SLC52A1Q9NWF4 448 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 PDZRN3Q9UPQ7 1066 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 TNNI2P48788 182 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 MVPQ14764 893 aaKnown RBP6.33□□□□□ -1.4
SCN1A-209ENST00000635750 SH2B1Q9NRF2 756 aaPredicted RBP6.33□□□□□ -1.4
SCN1A-209ENST00000635750 MRVI1Q9Y6F6 885 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 PLEKHH1Q9ULM0 1364 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 TTC36A6NLP5 189 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 GIPC1O14908 333 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 TMEM67Q5HYA8 995 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 ANKS4BQ8N8V4 417 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 CADPSQ9ULU8 1353 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 CAMK4Q16566 473 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 CCDC110Q8TBZ0 833 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 CABP1Q9NZU7 370 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 URI1O94763 535 aaPredicted RBP6.33□□□□□ -1.4
SCN1A-209ENST00000635750 EEF2P13639 858 aaKnown RBP6.33□□□□□ -1.4
SCN1A-209ENST00000635750 GABPAQ06546 454 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 ATP2B3Q16720 1220 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 ERCC6LQ2NKX8 1250 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 CCDC152Q4G0S7 254 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 EPSTI1Q96J88 318 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 NACA2Q9H009 215 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 FANCD2Q9BXW9 1451 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 NBPF6Q5VWK0 638 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 NBPF5PQ86XG9 351 aaPredicted RBP6.33□□□□□ -1.4
SCN1A-209ENST00000635750 NBPF4Q96M43 638 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 SETDB2Q96T68 719 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 WIZO95785 1651 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 GAPVD1Q14C86 1478 aa6.33□□□□□ -1.4
SCN1A-209ENST00000635750 SPDYE3A6NKU9 549 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 SEPT6Q14141 434 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 RPUSD2Q8IZ73 545 aaKnown RBP6.32□□□□□ -1.4
SCN1A-209ENST00000635750 IL27Q8NEV9 243 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 DNAAF4Q8WXU2 420 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 TTC14Q96N46 770 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 SYNJ2O15056 1496 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 SPOUT1Q5T280 376 aaKnown RBP6.32□□□□□ -1.4
SCN1A-209ENST00000635750 RBM10P98175 930 aaKnown RBP6.32□□□□□ -1.4
SCN1A-209ENST00000635750 CCDC50Q8IVM0 306 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 TNPO1Q92973 898 aaKnown RBP6.32□□□□□ -1.4
SCN1A-209ENST00000635750 BOLA2Q9H3K6 86 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 PLEKHH2Q8IVE3 1493 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 LMBR1Q8WVP7 490 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 SMARCC1Q92922 1105 aaPredicted RBP6.32□□□□□ -1.4
SCN1A-209ENST00000635750 GSDMDP57764 484 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 AFAP1L2Q8N4X5 818 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms