RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 GNL2Q13823 731 aaKnown RBP17.19■□□□□ 0.34
PTBP1-221ENST00000635647 BLOC1S2Q6QNY1 142 aa17.19■□□□□ 0.34
PTBP1-221ENST00000635647 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
PTBP1-221ENST00000635647 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
PTBP1-221ENST00000635647 F13A1P00488 732 aa17.18■□□□□ 0.34
PTBP1-221ENST00000635647 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
PTBP1-221ENST00000635647 SNRKQ9NRH2 765 aa17.18■□□□□ 0.34
PTBP1-221ENST00000635647 ATF3P18847 181 aa17.18■□□□□ 0.34
PTBP1-221ENST00000635647 NMIQ13287 307 aaPredicted RBP17.18■□□□□ 0.34
PTBP1-221ENST00000635647 RNF20Q5VTR2 975 aa17.18■□□□□ 0.34
PTBP1-221ENST00000635647 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
PTBP1-221ENST00000635647 FKBP4Q02790 459 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■□□ 19
PTBP1-221ENST00000635647 SF3A1Q15459 793 aaKnown RBP17.18■□□□□ 0.34
PTBP1-221ENST00000635647 NFATC2IPQ8NCF5 419 aa17.18■□□□□ 0.34
PTBP1-221ENST00000635647 CHMP4CQ96CF2 233 aa17.18■□□□□ 0.34
PTBP1-221ENST00000635647 LSG1Q9H089 658 aaKnown RBP17.18■□□□□ 0.34
PTBP1-221ENST00000635647 BICC1Q9H694 974 aaKnown RBP17.18■□□□□ 0.34
PTBP1-221ENST00000635647 PTPRUQ92729 1446 aa17.18■□□□□ 0.34
PTBP1-221ENST00000635647 SPATA31D1Q6ZQQ2 1576 aa17.17■□□□□ 0.34
PTBP1-221ENST00000635647 KSR2Q6VAB6 950 aa17.17■□□□□ 0.34
PTBP1-221ENST00000635647 DDX46Q7L014 1031 aaKnown RBP17.17■□□□□ 0.34
PTBP1-221ENST00000635647 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
PTBP1-221ENST00000635647 ZBTB3Q9H5J0 574 aa17.17■□□□□ 0.34
PTBP1-221ENST00000635647 EVA1CP58658 441 aa17.17■□□□□ 0.34
PTBP1-221ENST00000635647 AKAP4Q5JQC9 854 aa17.17■□□□□ 0.34
PTBP1-221ENST00000635647 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■■□□ 15.4
PTBP1-221ENST00000635647 UBE2HP62256 183 aa17.16■□□□□ 0.34
PTBP1-221ENST00000635647 KCNH5Q8NCM2 988 aa17.16■□□□□ 0.34
PTBP1-221ENST00000635647 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
PTBP1-221ENST00000635647 GRM8O00222 908 aa17.16■□□□□ 0.34
PTBP1-221ENST00000635647 DYNC1I1O14576 645 aa17.16■□□□□ 0.34
PTBP1-221ENST00000635647 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
PTBP1-221ENST00000635647 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
PTBP1-221ENST00000635647 TRERF1Q96PN7 1200 aa17.16■□□□□ 0.34
PTBP1-221ENST00000635647 SALL3Q9BXA9 1300 aa17.15■□□□□ 0.34
PTBP1-221ENST00000635647 RNMTO43148 476 aaKnown RBP17.15■□□□□ 0.34
PTBP1-221ENST00000635647 GCP02774 474 aa17.15■□□□□ 0.34
PTBP1-221ENST00000635647 PSMA5P28066 241 aa17.15■□□□□ 0.34
PTBP1-221ENST00000635647 RIMS1Q86UR5 1692 aaKnown RBP17.15■□□□□ 0.34
PTBP1-221ENST00000635647 CABP4P57796 275 aa17.15■□□□□ 0.34
PTBP1-221ENST00000635647 CCT2P78371 535 aaKnown RBP17.15■□□□□ 0.34
PTBP1-221ENST00000635647 CHST3Q7LGC8 479 aa17.15■□□□□ 0.34
PTBP1-221ENST00000635647 TLR7Q9NYK1 1049 aaKnown RBP17.15■□□□□ 0.34
PTBP1-221ENST00000635647 TATP17735 454 aaPredicted RBP17.15■□□□□ 0.34
PTBP1-221ENST00000635647 KRT85P78386 507 aa17.14■□□□□ 0.33
PTBP1-221ENST00000635647 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.33
PTBP1-221ENST00000635647 KDRP35968 1356 aa17.14■□□□□ 0.33
PTBP1-221ENST00000635647 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
PTBP1-221ENST00000635647 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-221ENST00000635647 TECPR2O15040 1411 aa17.14■□□□□ 0.33
PTBP1-221ENST00000635647 A0A087WZG4 1122 aa17.14■□□□□ 0.33
PTBP1-221ENST00000635647 POLA2Q14181 598 aa17.14■□□□□ 0.33
PTBP1-221ENST00000635647 HSP90AB3PQ58FF7 597 aa17.14■□□□□ 0.33
PTBP1-221ENST00000635647 ME3Q16798 604 aa17.13■□□□□ 0.33
PTBP1-221ENST00000635647 ZSCAN31Q96LW9 406 aaPredicted RBP17.13■□□□□ 0.33
PTBP1-221ENST00000635647 AMOTQ4VCS5 1084 aa17.13■□□□□ 0.33
PTBP1-221ENST00000635647 CCDC129Q6ZRS4 1044 aa17.13■□□□□ 0.33
PTBP1-221ENST00000635647 TOM1L2Q6ZVM7 507 aa17.13■□□□□ 0.33
PTBP1-221ENST00000635647 PRDM4Q9UKN5 801 aa17.13■□□□□ 0.33
PTBP1-221ENST00000635647 KRT28Q7Z3Y7 464 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 SMAP1Q8IYB5 467 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-221ENST00000635647 AOX1Q06278 1338 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 TTC41PQ6P2S7 1318 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 HYPKQ9NX55 129 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 CCDC171Q6TFL3 1326 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 BECN2A8MW95 431 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 NPHP1O15259 732 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-221ENST00000635647 HAND2P61296 217 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 SPATA32Q96LK8 384 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
PTBP1-221ENST00000635647 PDCL2Q8N4E4 241 aa17.11■□□□□ 0.33
PTBP1-221ENST00000635647 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
PTBP1-221ENST00000635647 CCDC192P0DO97 292 aa17.11■□□□□ 0.33
PTBP1-221ENST00000635647 HS1BP3Q53T59 392 aa17.11■□□□□ 0.33
PTBP1-221ENST00000635647 CREBRFQ8IUR6 639 aa17.11■□□□□ 0.33
PTBP1-221ENST00000635647 TNMDQ9H2S6 317 aa17.11■□□□□ 0.33
PTBP1-221ENST00000635647 AGLP35573 1532 aa17.11■□□□□ 0.33
PTBP1-221ENST00000635647 LETM1O95202 739 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-221ENST00000635647 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
PTBP1-221ENST00000635647 SH2B1Q9NRF2 756 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-221ENST00000635647 A0A0D9SFI3 127 aa17.1■□□□□ 0.33
PTBP1-221ENST00000635647 CCDC94Q9BW85 323 aaPredicted RBP17.1■□□□□ 0.33
PTBP1-221ENST00000635647 NUP62CLQ9H1M0 184 aa17.1■□□□□ 0.33
PTBP1-221ENST00000635647 TPCN1Q9ULQ1 816 aa17.1■□□□□ 0.33
PTBP1-221ENST00000635647 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
PTBP1-221ENST00000635647 HIP1O00291 1037 aa17.1■□□□□ 0.33
PTBP1-221ENST00000635647 ERICH4A6NGS2 130 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 GOLIM4O00461 696 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 ALDH1L1O75891 902 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
PTBP1-221ENST00000635647 CDC37L1Q7L3B6 337 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 PDLIM2Q96JY6 352 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 BABAM1Q9NWV8 329 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 GOLGA6L19H0YKK7 550 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms