RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 NTSR2O95665 410 aa13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 EAPPQ56P03 285 aaPredicted RBP13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 SLC10A5Q5PT55 438 aa13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 PNMA8AQ86V59 439 aaPredicted RBP13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 LDHDQ86WU2 507 aa13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 HACL1Q9UJ83 578 aa13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 ADAMTS8Q9UP79 889 aa13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
RHOXF1P3-201ENST00000635058 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
RHOXF1P3-201ENST00000635058 BCORQ6W2J9 1755 aa12.99□□□□□ -0.33
RHOXF1P3-201ENST00000635058 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
RHOXF1P3-201ENST00000635058 FZD9O00144 591 aa12.99□□□□□ -0.33
RHOXF1P3-201ENST00000635058 PPEF1O14829 653 aaPredicted RBP12.99□□□□□ -0.33
RHOXF1P3-201ENST00000635058 ANXA1P04083 346 aa12.99□□□□□ -0.33
RHOXF1P3-201ENST00000635058 GPC2Q8N158 579 aa12.99□□□□□ -0.33
RHOXF1P3-201ENST00000635058 LARGE2Q8N3Y3 721 aa12.99□□□□□ -0.33
RHOXF1P3-201ENST00000635058 XAGE3Q8WTP9 111 aa12.99□□□□□ -0.33
RHOXF1P3-201ENST00000635058 ABCC12Q96J65 1359 aa12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 BBOX1O75936 387 aa12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 EPHX2P34913 555 aa12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 CALD1Q05682 793 aaKnown RBP12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 TCIRG1Q13488 830 aa12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 LRP10Q7Z4F1 713 aa12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 TRIM35Q9UPQ4 493 aa12.98□□□□□ -0.33
RHOXF1P3-201ENST00000635058 COL11A2P13942 1736 aaPredicted RBP12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 HOXB7P09629 217 aa12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 LMOD1P29536 600 aaPredicted RBP12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 HDGFL1Q5TGJ6 251 aa12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 DDX46Q7L014 1031 aaKnown RBP12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 PRKRIP1Q9H875 184 aaPredicted RBP12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 DBF4Q9UBU7 674 aaPredicted RBP12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 GJA3Q9Y6H8 435 aa12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
RHOXF1P3-201ENST00000635058 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 WDR90Q96KV7 1748 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 ZNF541Q9H0D2 1346 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 POTEIP0CG38 1075 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 POTEJP0CG39 1038 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 NIM1KQ8IY84 436 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 CHMP4AQ9BY43 222 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 HYPKQ9NX55 129 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 CHPF2Q9P2E5 772 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 ATP6V0A2Q9Y487 856 aa12.96□□□□□ -0.33
RHOXF1P3-201ENST00000635058 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
RHOXF1P3-201ENST00000635058 HCLS1P14317 486 aaPredicted RBP12.95□□□□□ -0.34
RHOXF1P3-201ENST00000635058 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
RHOXF1P3-201ENST00000635058 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
RHOXF1P3-201ENST00000635058 TIAM2Q8IVF5 1701 aa12.94□□□□□ -0.34
RHOXF1P3-201ENST00000635058 TMEM88BA6NKF7 163 aa12.94□□□□□ -0.34
RHOXF1P3-201ENST00000635058 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
RHOXF1P3-201ENST00000635058 DUSP27Q5VZP5 1158 aa12.94□□□□□ -0.34
RHOXF1P3-201ENST00000635058 DPP8Q6V1X1 898 aaPredicted RBP12.94□□□□□ -0.34
RHOXF1P3-201ENST00000635058 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
RHOXF1P3-201ENST00000635058 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
RHOXF1P3-201ENST00000635058 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
RHOXF1P3-201ENST00000635058 DLG5Q8TDM6 1919 aa12.94□□□□□ -0.34
RHOXF1P3-201ENST00000635058 CCDC88AQ3V6T2 1871 aa12.93□□□□□ -0.34
RHOXF1P3-201ENST00000635058 APAF1O14727 1248 aa12.93□□□□□ -0.34
RHOXF1P3-201ENST00000635058 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
RHOXF1P3-201ENST00000635058 GNAI1P63096 354 aa12.93□□□□□ -0.34
RHOXF1P3-201ENST00000635058 TMC4Q7Z404 712 aa12.93□□□□□ -0.34
RHOXF1P3-201ENST00000635058 CNTROBQ8N137 903 aa12.93□□□□□ -0.34
RHOXF1P3-201ENST00000635058 MPNDQ8N594 471 aa12.93□□□□□ -0.34
RHOXF1P3-201ENST00000635058 MKRN1Q9UHC7 482 aaKnown RBP12.93□□□□□ -0.34
RHOXF1P3-201ENST00000635058 ABCC4O15439 1325 aa12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 ITGBL1O95965 494 aaPredicted RBP12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 GRAPQ13588 217 aa12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 AOC3Q16853 763 aa12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 RIC3Q7Z5B4 369 aa12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 MBIPQ9NS73 344 aa12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 IFT57Q9NWB7 429 aa12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 ZNRF3Q9ULT6 936 aa12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 DICER1Q9UPY3 1922 aaKnown RBP12.92□□□□□ -0.34
RHOXF1P3-201ENST00000635058 PASKQ96RG2 1323 aa12.91□□□□□ -0.34
RHOXF1P3-201ENST00000635058 HSPA1AP0DMV8 641 aaKnown RBP12.91□□□□□ -0.34
RHOXF1P3-201ENST00000635058 HSPA1BP0DMV9 641 aaKnown RBP12.91□□□□□ -0.34
RHOXF1P3-201ENST00000635058 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
RHOXF1P3-201ENST00000635058 TNIP1Q15025 636 aa12.91□□□□□ -0.34
RHOXF1P3-201ENST00000635058 MAP1SQ66K74 1059 aaPredicted RBP12.91□□□□□ -0.34
RHOXF1P3-201ENST00000635058 USP50Q70EL3 339 aaPredicted RBP12.91□□□□□ -0.34
RHOXF1P3-201ENST00000635058 RTFDC1Q9BY42 306 aaPredicted RBP12.91□□□□□ -0.34
RHOXF1P3-201ENST00000635058 ARFGEF2Q9Y6D5 1785 aa12.9□□□□□ -0.34
RHOXF1P3-201ENST00000635058 ATP5J2-PTCD1G3V325 749 aa12.9□□□□□ -0.34
RHOXF1P3-201ENST00000635058 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.34
RHOXF1P3-201ENST00000635058 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
RHOXF1P3-201ENST00000635058 FAM89AQ96GI7 184 aa12.9□□□□□ -0.34
RHOXF1P3-201ENST00000635058 ISCA1Q9BUE6 129 aa12.9□□□□□ -0.34
RHOXF1P3-201ENST00000635058 NUP98P52948 1817 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms