RNA–Protein interactions for RNA: ENST00000630484.2

LINC02028-231, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 322 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-231	ENST00000630484	IFT57	Q9NWB7	429 aa		18.95	■□□□□ 0.62
LINC02028-231	ENST00000630484	CHPF2	Q9P2E5	772 aa		18.95	■□□□□ 0.62
LINC02028-231	ENST00000630484	GTF2E1	P29083	439 aa	Predicted RBP	18.94	■□□□□ 0.62
LINC02028-231	ENST00000630484	NECTIN2	Q92692	538 aa		18.94	■□□□□ 0.62
LINC02028-231	ENST00000630484	LAS1L	Q9Y4W2	734 aa	Known RBP	18.94	■□□□□ 0.62
LINC02028-231	ENST00000630484	RNF123	Q5XPI4	1314 aa		18.94	■□□□□ 0.62
LINC02028-231	ENST00000630484	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
LINC02028-231	ENST00000630484	FSTL1	Q12841	308 aa		18.93	■□□□□ 0.62
LINC02028-231	ENST00000630484	PPP1R42	Q7Z4L9	355 aa		18.93	■□□□□ 0.62
LINC02028-231	ENST00000630484	NLRP10	Q86W26	655 aa		18.93	■□□□□ 0.62
LINC02028-231	ENST00000630484	DDX60	Q8IY21	1712 aa	Known RBP	18.93	■□□□□ 0.62
LINC02028-231	ENST00000630484	VEGFA	P15692	232 aa	Predicted RBP	18.92	■□□□□ 0.62
LINC02028-231	ENST00000630484	TCIRG1	Q13488	830 aa		18.92	■□□□□ 0.62
LINC02028-231	ENST00000630484	HSP90AB3P	Q58FF7	597 aa		18.92	■□□□□ 0.62
LINC02028-231	ENST00000630484	HDGFL1	Q5TGJ6	251 aa		18.92	■□□□□ 0.62
LINC02028-231	ENST00000630484	DUSP27	Q5VZP5	1158 aa		18.92	■□□□□ 0.62
LINC02028-231	ENST00000630484	RTKN2	Q8IZC4	609 aa		18.92	■□□□□ 0.62
LINC02028-231	ENST00000630484	CRAMP1	Q96RY5	1269 aa		18.92	■□□□□ 0.62
LINC02028-231	ENST00000630484	DBF4	Q9UBU7	674 aa	Predicted RBP	18.92	■□□□□ 0.62
LINC02028-231	ENST00000630484	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.91	■□□□□ 0.62
LINC02028-231	ENST00000630484	UTP14A	Q9BVJ6	771 aa	Known RBP	18.91	■□□□□ 0.62
LINC02028-231	ENST00000630484	COL4A5	P29400	1685 aa		18.91	■□□□□ 0.62
LINC02028-231	ENST00000630484	SCN4A	P35499	1836 aa		18.9	■□□□□ 0.62
LINC02028-231	ENST00000630484	APLP1	P51693	650 aa		18.9	■□□□□ 0.62
LINC02028-231	ENST00000630484	GNAI1	P63096	354 aa		18.9	■□□□□ 0.62
LINC02028-231	ENST00000630484	AIMP1	Q12904	312 aa	Known RBP	18.9	■□□□□ 0.62
LINC02028-231	ENST00000630484	SLC51A	Q86UW1	340 aa		18.9	■□□□□ 0.62
LINC02028-231	ENST00000630484	DNAJC5G	Q8N7S2	189 aa		18.9	■□□□□ 0.62
LINC02028-231	ENST00000630484	PLBD2	Q8NHP8	589 aa		18.9	■□□□□ 0.62
LINC02028-231	ENST00000630484	PSMD1	Q99460	953 aa		18.9	■□□□□ 0.62
LINC02028-231	ENST00000630484	PCNT	O95613	3336 aa		18.89	■□□□□ 0.62
LINC02028-231	ENST00000630484	TAF1	P21675	1872 aa		18.89	■□□□□ 0.61
LINC02028-231	ENST00000630484	CALD1	Q05682	793 aa	Known RBP	18.89	■□□□□ 0.61
LINC02028-231	ENST00000630484	CCDC27	Q2M243	656 aa		18.89	■□□□□ 0.61
LINC02028-231	ENST00000630484	NCBP3	Q53F19	620 aa	Known RBP	18.89	■□□□□ 0.61
LINC02028-231	ENST00000630484	CC2D2B	Q6DHV5	1058 aa		18.89	■□□□□ 0.61
LINC02028-231	ENST00000630484	DPY19L2	Q6NUT2	758 aa		18.89	■□□□□ 0.61
LINC02028-231	ENST00000630484	ISCA1	Q9BUE6	129 aa		18.89	■□□□□ 0.61
LINC02028-231	ENST00000630484	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.88	■□□□□ 0.61
LINC02028-231	ENST00000630484	SYNE4	Q8N205	404 aa		18.88	■□□□□ 0.61
LINC02028-231	ENST00000630484	RPGR	Q92834	1020 aa	Known RBP	18.88	■□□□□ 0.61
LINC02028-231	ENST00000630484	L3MBTL3	Q96JM7	780 aa	Predicted RBP	18.88	■□□□□ 0.61
LINC02028-231	ENST00000630484	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.88	■□□□□ 0.61
LINC02028-231	ENST00000630484	HYPK	Q9NX55	129 aa		18.88	■□□□□ 0.61
LINC02028-231	ENST00000630484	DDN	O94850	711 aa	Predicted RBP	18.87	■□□□□ 0.61
LINC02028-231	ENST00000630484	ANKRD13D	Q6ZTN6	518 aa		18.87	■□□□□ 0.61
LINC02028-231	ENST00000630484	C8orf58	Q8NAV2	365 aa		18.87	■□□□□ 0.61
LINC02028-231	ENST00000630484	RBM17	Q96I25	401 aa	Known RBP	18.87	■□□□□ 0.61
LINC02028-231	ENST00000630484	NLRP3	Q96P20	1036 aa		18.87	■□□□□ 0.61
LINC02028-231	ENST00000630484	LRRC37A	A6NMS7	1700 aa		18.86	■□□□□ 0.61
LINC02028-231	ENST00000630484	FZD9	O00144	591 aa		18.86	■□□□□ 0.61
LINC02028-231	ENST00000630484	IARS	P41252	1262 aa	Known RBP	18.86	■□□□□ 0.61
LINC02028-231	ENST00000630484	TRIM28	Q13263	835 aa	Known RBP	18.86	■□□□□ 0.61
LINC02028-231	ENST00000630484	GRIPAP1	Q4V328	841 aa		18.86	■□□□□ 0.61
LINC02028-231	ENST00000630484	SMC1B	Q8NDV3	1235 aa		18.86	■□□□□ 0.61
LINC02028-231	ENST00000630484	ADAMTSL1	Q8N6G6	1762 aa		18.86	■□□□□ 0.61
LINC02028-231	ENST00000630484	ABCC4	O15439	1325 aa		18.85	■□□□□ 0.61
LINC02028-231	ENST00000630484	SH3TC1	Q8TE82	1336 aa		18.85	■□□□□ 0.61
LINC02028-231	ENST00000630484	ZNF541	Q9H0D2	1346 aa		18.85	■□□□□ 0.61
LINC02028-231	ENST00000630484	PPEF1	O14829	653 aa	Predicted RBP	18.84	■□□□□ 0.61
LINC02028-231	ENST00000630484	HCLS1	P14317	486 aa	Predicted RBP	18.84	■□□□□ 0.61
LINC02028-231	ENST00000630484	WWC1	Q8IX03	1113 aa		18.84	■□□□□ 0.61
LINC02028-231	ENST00000630484	TRMT112	Q9UI30	125 aa	Known RBP	18.84	■□□□□ 0.61
LINC02028-231	ENST00000630484	COL4A1	P02462	1669 aa		18.84	■□□□□ 0.61
LINC02028-231	ENST00000630484	TSPYL6	Q8N831	410 aa		18.83	■□□□□ 0.6
LINC02028-231	ENST00000630484	PHAX	Q9H814	394 aa	Known RBP	18.83	■□□□□ 0.6
LINC02028-231	ENST00000630484	ATP6V0A2	Q9Y487	856 aa		18.83	■□□□□ 0.6
LINC02028-231	ENST00000630484	ELL2	O00472	640 aa	Predicted RBP	18.82	■□□□□ 0.6
LINC02028-231	ENST00000630484	DUOX1	Q9NRD9	1551 aa		18.81	■□□□□ 0.6
LINC02028-231	ENST00000630484	IL16	Q14005	1332 aa		18.81	■□□□□ 0.6
LINC02028-231	ENST00000630484	LTBP1	Q14766	1721 aa		18.81	■□□□□ 0.6
LINC02028-231	ENST00000630484	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.81	■□□□□ 0.6
LINC02028-231	ENST00000630484	MRS2	Q9HD23	443 aa		18.81	■□□□□ 0.6
LINC02028-231	ENST00000630484	CACNA1F	O60840	1977 aa		18.81	■□□□□ 0.6
LINC02028-231	ENST00000630484	ATP5J2-PTCD1	G3V325	749 aa		18.8	■□□□□ 0.6
LINC02028-231	ENST00000630484	BBOX1	O75936	387 aa		18.8	■□□□□ 0.6
LINC02028-231	ENST00000630484	POTEI	P0CG38	1075 aa		18.8	■□□□□ 0.6
LINC02028-231	ENST00000630484	POTEJ	P0CG39	1038 aa		18.8	■□□□□ 0.6
LINC02028-231	ENST00000630484	HTRA3	P83110	453 aa		18.8	■□□□□ 0.6
LINC02028-231	ENST00000630484	SF3B3	Q15393	1217 aa	Known RBP	18.8	■□□□□ 0.6
LINC02028-231	ENST00000630484	TSR2	Q969E8	191 aa	Known RBP	18.8	■□□□□ 0.6
LINC02028-231	ENST00000630484	ANP32C	O43423	234 aa		18.79	■□□□□ 0.6
LINC02028-231	ENST00000630484	SP8	Q8IXZ3	490 aa		18.79	■□□□□ 0.6
LINC02028-231	ENST00000630484	FAM89A	Q96GI7	184 aa		18.79	■□□□□ 0.6
LINC02028-231	ENST00000630484	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.79	■□□□□ 0.6
LINC02028-231	ENST00000630484	IQCA1L	A6NCM1	817 aa		18.78	■□□□□ 0.6
LINC02028-231	ENST00000630484	GRAP	Q13588	217 aa		18.78	■□□□□ 0.6
LINC02028-231	ENST00000630484	GPC2	Q8N158	579 aa		18.78	■□□□□ 0.6
LINC02028-231	ENST00000630484	GRAPL	Q8TC17	118 aa	Predicted RBP	18.78	■□□□□ 0.6
LINC02028-231	ENST00000630484	VPS33B	Q9H267	617 aa		18.78	■□□□□ 0.6
LINC02028-231	ENST00000630484	CCDC30	Q5VVM6	783 aa		18.77	■□□□□ 0.6
LINC02028-231	ENST00000630484	CHADL	Q6NUI6	762 aa		18.77	■□□□□ 0.6
LINC02028-231	ENST00000630484	ZNF428	Q96B54	188 aa		18.77	■□□□□ 0.6
LINC02028-231	ENST00000630484	TCERG1	O14776	1098 aa	Known RBP	18.76	■□□□□ 0.59
LINC02028-231	ENST00000630484	GOLGA2	Q08379	1002 aa		18.76	■□□□□ 0.59
LINC02028-231	ENST00000630484	DDX46	Q7L014	1031 aa	Known RBP	18.76	■□□□□ 0.59
LINC02028-231	ENST00000630484	RIC3	Q7Z5B4	369 aa		18.76	■□□□□ 0.59
LINC02028-231	ENST00000630484	JMY	Q8N9B5	988 aa		18.76	■□□□□ 0.59
LINC02028-231	ENST00000630484	JDP2	Q8WYK2	163 aa		18.76	■□□□□ 0.59
LINC02028-231	ENST00000630484	KLRG1	Q96E93	195 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms