RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
SPTAN1-219ENST00000629378 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
SPTAN1-219ENST00000629378 AIMP1Q12904 312 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-219ENST00000629378 CCDC93Q567U6 631 aa11.79□□□□□ -0.52
SPTAN1-219ENST00000629378 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-219ENST00000629378 NYXQ9GZU5 481 aa11.79□□□□□ -0.52
SPTAN1-219ENST00000629378 CHL1O00533 1208 aa11.78□□□□□ -0.52
SPTAN1-219ENST00000629378 NTSR2O95665 410 aa11.78□□□□□ -0.52
SPTAN1-219ENST00000629378 ALDH1B1P30837 517 aa11.78□□□□□ -0.52
SPTAN1-219ENST00000629378 FKBP4Q02790 459 aaKnown RBP eCLIP11.78□□□□□ -0.52
SPTAN1-219ENST00000629378 LMOD3Q0VAK6 560 aa11.78□□□□□ -0.52
SPTAN1-219ENST00000629378 CRY2Q49AN0 593 aa11.78□□□□□ -0.52
SPTAN1-219ENST00000629378 SOGA3Q5TF21 947 aa11.78□□□□□ -0.52
SPTAN1-219ENST00000629378 COPS6Q7L5N1 327 aa11.78□□□□□ -0.52
SPTAN1-219ENST00000629378 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
SPTAN1-219ENST00000629378 XAGE3Q8WTP9 111 aa11.77□□□□□ -0.53
SPTAN1-219ENST00000629378 RPGRQ92834 1020 aaKnown RBP11.77□□□□□ -0.53
SPTAN1-219ENST00000629378 BABAM1Q9NWV8 329 aa11.77□□□□□ -0.53
SPTAN1-219ENST00000629378 ERBB4Q15303 1308 aa11.77□□□□□ -0.53
SPTAN1-219ENST00000629378 ZNF541Q9H0D2 1346 aa11.77□□□□□ -0.53
SPTAN1-219ENST00000629378 TAF1P21675 1872 aa11.76□□□□□ -0.53
SPTAN1-219ENST00000629378 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
SPTAN1-219ENST00000629378 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
SPTAN1-219ENST00000629378 LAMB2P55268 1798 aa11.75□□□□□ -0.53
SPTAN1-219ENST00000629378 HOXA10P31260 410 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-219ENST00000629378 IARSP41252 1262 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-219ENST00000629378 PPP1R42Q7Z4L9 355 aa11.75□□□□□ -0.53
SPTAN1-219ENST00000629378 RBM17Q96I25 401 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-219ENST00000629378 UTP14AQ9BVJ6 771 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-219ENST00000629378 CHPF2Q9P2E5 772 aa11.75□□□□□ -0.53
SPTAN1-219ENST00000629378 COL4A5P29400 1685 aa11.75□□□□□ -0.53
SPTAN1-219ENST00000629378 ANKRD36CQ5JPF3 1778 aa11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 APAF1O14727 1248 aa11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 TCIRG1Q13488 830 aa11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 SLC10A5Q5PT55 438 aa11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 DDX21Q9NR30 783 aaKnown RBP eCLIP11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 SNED1Q8TER0 1413 aa11.74□□□□□ -0.53
SPTAN1-219ENST00000629378 FZD9O00144 591 aa11.73□□□□□ -0.53
SPTAN1-219ENST00000629378 ELL2O00472 640 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-219ENST00000629378 PPEF1O14829 653 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-219ENST00000629378 PARP10Q53GL7 1025 aa11.73□□□□□ -0.53
SPTAN1-219ENST00000629378 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
SPTAN1-219ENST00000629378 CRAMP1Q96RY5 1269 aa11.73□□□□□ -0.53
SPTAN1-219ENST00000629378 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-219ENST00000629378 MBIPQ9NS73 344 aa11.73□□□□□ -0.53
SPTAN1-219ENST00000629378 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-219ENST00000629378 SCN4AP35499 1836 aa11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 ATP5J2-PTCD1G3V325 749 aa11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 EAPPQ56P03 285 aaPredicted RBP11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 DUSP27Q5VZP5 1158 aa11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 CFAP44Q96MT7 982 aa11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 PSMD1Q99460 953 aa11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-219ENST00000629378 RIC1Q4ADV7 1423 aa11.71□□□□□ -0.53
SPTAN1-219ENST00000629378 PCNTO95613 3336 aa11.71□□□□□ -0.53
SPTAN1-219ENST00000629378 ABCC4O15439 1325 aa11.71□□□□□ -0.53
SPTAN1-219ENST00000629378 RNF123Q5XPI4 1314 aa11.71□□□□□ -0.53
SPTAN1-219ENST00000629378 ZNF853P0CG23 659 aa11.71□□□□□ -0.53
SPTAN1-219ENST00000629378 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
SPTAN1-219ENST00000629378 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.53
SPTAN1-219ENST00000629378 JMYQ8N9B5 988 aa11.71□□□□□ -0.53
SPTAN1-219ENST00000629378 GJA3Q9Y6H8 435 aa11.71□□□□□ -0.53
SPTAN1-219ENST00000629378 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
SPTAN1-219ENST00000629378 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
SPTAN1-219ENST00000629378 LARGE2Q8N3Y3 721 aa11.7□□□□□ -0.54
SPTAN1-219ENST00000629378 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
SPTAN1-219ENST00000629378 PHAXQ9H814 394 aaKnown RBP11.7□□□□□ -0.54
SPTAN1-219ENST00000629378 HACL1Q9UJ83 578 aa11.7□□□□□ -0.54
SPTAN1-219ENST00000629378 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
SPTAN1-219ENST00000629378 GTF3C3Q9Y5Q9 886 aa11.7□□□□□ -0.54
SPTAN1-219ENST00000629378 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 IQCA1LA6NCM1 817 aa11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 EPHX2P34913 555 aa11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 AOC3Q16853 763 aa11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 GPC2Q8N158 579 aa11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 C8orf58Q8NAV2 365 aa11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 PLBD2Q8NHP8 589 aa11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 FAM89AQ96GI7 184 aa11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 DBF4Q9UBU7 674 aaPredicted RBP11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 LTBP1Q14766 1721 aa11.69□□□□□ -0.54
SPTAN1-219ENST00000629378 SH3TC1Q8TE82 1336 aa11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 EPS15P42566 896 aa11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 EIF6P56537 245 aaKnown RBP11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 LDHDQ86WU2 507 aa11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 JARID2Q92833 1246 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 ISCA1Q9BUE6 129 aa11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 MKRN1Q9UHC7 482 aaKnown RBP11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 COL4A1P02462 1669 aa11.68□□□□□ -0.54
SPTAN1-219ENST00000629378 PASKQ96RG2 1323 aa11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 PPIP5K2O43314 1243 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms