RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 DICER1Q9UPY3 1922 aaKnown RBP18.8■□□□□ 0.6
CDK7-215ENST00000629350 MYL6BP14649 208 aa18.8■□□□□ 0.6
CDK7-215ENST00000629350 PDIA6Q15084 440 aa18.8■□□□□ 0.6
CDK7-215ENST00000629350 C9orf131Q5VYM1 1079 aa18.8■□□□□ 0.6
CDK7-215ENST00000629350 CNBD1Q8NA66 436 aa18.8■□□□□ 0.6
CDK7-215ENST00000629350 PNISRQ8TF01 805 aaKnown RBP18.8■□□□□ 0.6
CDK7-215ENST00000629350 FAM177BA6PVY3 158 aa18.79■□□□□ 0.6
CDK7-215ENST00000629350 NFKBIEO00221 500 aa18.79■□□□□ 0.6
CDK7-215ENST00000629350 WDR43Q15061 677 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDK7-215ENST00000629350 RUNDC1Q96C34 613 aa18.79■□□□□ 0.6
CDK7-215ENST00000629350 SETDB2Q96T68 719 aa18.79■□□□□ 0.6
CDK7-215ENST00000629350 UBN2Q6ZU65 1347 aa18.78■□□□□ 0.6
CDK7-215ENST00000629350 STK25O00506 426 aa18.78■□□□□ 0.6
CDK7-215ENST00000629350 KIF3CO14782 793 aa18.78■□□□□ 0.6
CDK7-215ENST00000629350 BRIP1Q9BX63 1249 aa18.78■□□□□ 0.6
CDK7-215ENST00000629350 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
CDK7-215ENST00000629350 NECTIN2Q92692 538 aa18.77■□□□□ 0.6
CDK7-215ENST00000629350 PNNQ9H307 717 aaKnown RBP18.77■□□□□ 0.6
CDK7-215ENST00000629350 ZBTB3Q9H5J0 574 aa18.77■□□□□ 0.6
CDK7-215ENST00000629350 NMRK2Q9NPI5 230 aa18.77■□□□□ 0.6
CDK7-215ENST00000629350 NIP7Q9Y221 180 aaKnown RBP eCLIP18.77■□□□□ 0.6
CDK7-215ENST00000629350 H0YIN7 160 aa18.76■□□□□ 0.59
CDK7-215ENST00000629350 TTLL6Q8N841 843 aa18.76■□□□□ 0.59
CDK7-215ENST00000629350 RNF181Q9P0P0 153 aa18.76■□□□□ 0.59
CDK7-215ENST00000629350 MAP3K15Q6ZN16 1313 aa18.75■□□□□ 0.59
CDK7-215ENST00000629350 CHL1O00533 1208 aa18.75■□□□□ 0.59
CDK7-215ENST00000629350 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
CDK7-215ENST00000629350 CLEC4GQ6UXB4 293 aa18.75■□□□□ 0.59
CDK7-215ENST00000629350 NBPF5PQ86XG9 351 aaPredicted RBP18.75■□□□□ 0.59
CDK7-215ENST00000629350 ZNF622Q969S3 477 aaKnown RBP eCLIP18.75■□□□□ 0.59
CDK7-215ENST00000629350 SRGNP10124 158 aa18.74■□□□□ 0.59
CDK7-215ENST00000629350 EIF2S2P20042 333 aaKnown RBP18.74■□□□□ 0.59
CDK7-215ENST00000629350 GPTP24298 496 aa18.74■□□□□ 0.59
CDK7-215ENST00000629350 TAF1P21675 1872 aa18.73■□□□□ 0.59
CDK7-215ENST00000629350 COL4A1P02462 1669 aa18.73■□□□□ 0.59
CDK7-215ENST00000629350 APAF1O14727 1248 aa18.73■□□□□ 0.59
CDK7-215ENST00000629350 C21orf2O43822 256 aa18.73■□□□□ 0.59
CDK7-215ENST00000629350 C3orf67Q6ZVT6 689 aa18.73■□□□□ 0.59
CDK7-215ENST00000629350 NPM2Q86SE8 214 aaKnown RBP18.73■□□□□ 0.59
CDK7-215ENST00000629350 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
CDK7-215ENST00000629350 HS6ST3Q8IZP7 471 aa18.73■□□□□ 0.59
CDK7-215ENST00000629350 LAS1LQ9Y4W2 734 aaKnown RBP18.73■□□□□ 0.59
CDK7-215ENST00000629350 STK24Q9Y6E0 443 aa18.73■□□□□ 0.59
CDK7-215ENST00000629350 DDX60Q8IY21 1712 aaKnown RBP18.72■□□□□ 0.59
CDK7-215ENST00000629350 PDE6BP35913 854 aa18.72■□□□□ 0.59
CDK7-215ENST00000629350 ST5P78524 1137 aa18.72■□□□□ 0.59
CDK7-215ENST00000629350 LMOD3Q0VAK6 560 aa18.72■□□□□ 0.59
CDK7-215ENST00000629350 PRPF40BQ6NWY9 871 aaKnown RBP18.72■□□□□ 0.59
CDK7-215ENST00000629350 TMEM106CQ9BVX2 250 aa18.72■□□□□ 0.59
CDK7-215ENST00000629350 ZNF652Q9Y2D9 606 aa18.72■□□□□ 0.59
CDK7-215ENST00000629350 SNED1Q8TER0 1413 aa18.72■□□□□ 0.59
CDK7-215ENST00000629350 ZNF428Q96B54 188 aa18.71■□□□□ 0.59
CDK7-215ENST00000629350 BMP2KQ9NSY1 1161 aaPredicted RBP18.71■□□□□ 0.59
CDK7-215ENST00000629350 COL4A5P29400 1685 aa18.7■□□□□ 0.58
CDK7-215ENST00000629350 KLRG2A4D1S0 409 aaPredicted RBP18.7■□□□□ 0.58
CDK7-215ENST00000629350 ERFEQ4G0M1 354 aa18.7■□□□□ 0.58
CDK7-215ENST00000629350 MBIPQ9NS73 344 aa18.7■□□□□ 0.58
CDK7-215ENST00000629350 ERBB4Q15303 1308 aa18.7■□□□□ 0.58
CDK7-215ENST00000629350 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
CDK7-215ENST00000629350 NPHP1O15259 732 aa18.69■□□□□ 0.58
CDK7-215ENST00000629350 NTSR2O95665 410 aa18.69■□□□□ 0.58
CDK7-215ENST00000629350 SUSD4Q5VX71 490 aa18.69■□□□□ 0.58
CDK7-215ENST00000629350 STYK1Q6J9G0 422 aa18.69■□□□□ 0.58
CDK7-215ENST00000629350 KIF6Q6ZMV9 814 aa18.69■□□□□ 0.58
CDK7-215ENST00000629350 ZNF34Q8IZ26 560 aa18.69■□□□□ 0.58
CDK7-215ENST00000629350 C7orf43Q8WVR3 580 aa18.69■□□□□ 0.58
CDK7-215ENST00000629350 BABAM1Q9NWV8 329 aa18.69■□□□□ 0.58
CDK7-215ENST00000629350 ZNF316A6NFI3 1004 aaPredicted RBP18.68■□□□□ 0.58
CDK7-215ENST00000629350 ZNF853P0CG23 659 aa18.68■□□□□ 0.58
CDK7-215ENST00000629350 TIE1P35590 1138 aa18.68■□□□□ 0.58
CDK7-215ENST00000629350 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
CDK7-215ENST00000629350 XAGE3Q8WTP9 111 aa18.68■□□□□ 0.58
CDK7-215ENST00000629350 CHPF2Q9P2E5 772 aa18.68■□□□□ 0.58
CDK7-215ENST00000629350 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
CDK7-215ENST00000629350 RIC1Q4ADV7 1423 aa18.67■□□□□ 0.58
CDK7-215ENST00000629350 TTLL13PA6NNM8 815 aa18.67■□□□□ 0.58
CDK7-215ENST00000629350 MASTLQ96GX5 879 aa18.67■□□□□ 0.58
CDK7-215ENST00000629350 WDR90Q96KV7 1748 aa18.66■□□□□ 0.58
CDK7-215ENST00000629350 LMNB1P20700 586 aa18.66■□□□□ 0.58
CDK7-215ENST00000629350 GIGYF2Q6Y7W6 1299 aaKnown RBP18.66■□□□□ 0.58
CDK7-215ENST00000629350 SYNE4Q8N205 404 aa18.66■□□□□ 0.58
CDK7-215ENST00000629350 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
CDK7-215ENST00000629350 CRY2Q49AN0 593 aa18.65■□□□□ 0.58
CDK7-215ENST00000629350 TPTE2Q6XPS3 522 aa18.65■□□□□ 0.58
CDK7-215ENST00000629350 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
CDK7-215ENST00000629350 NPR1P16066 1061 aa18.64■□□□□ 0.57
CDK7-215ENST00000629350 CFAP44Q96MT7 982 aa18.64■□□□□ 0.57
CDK7-215ENST00000629350 HDGFL1Q5TGJ6 251 aa18.63■□□□□ 0.57
CDK7-215ENST00000629350 DUSP27Q5VZP5 1158 aa18.63■□□□□ 0.57
CDK7-215ENST00000629350 CNKSR1Q969H4 720 aa18.63■□□□□ 0.57
CDK7-215ENST00000629350 DDX21Q9NR30 783 aaKnown RBP eCLIP18.63■□□□□ 0.57
CDK7-215ENST00000629350 PDZRN3Q9UPQ7 1066 aa18.63■□□□□ 0.57
CDK7-215ENST00000629350 C8orf58Q8NAV2 365 aa18.62■□□□□ 0.57
CDK7-215ENST00000629350 RRAGCQ9HB90 399 aa18.62■□□□□ 0.57
CDK7-215ENST00000629350 LTBP3Q9NS15 1303 aa18.62■□□□□ 0.57
CDK7-215ENST00000629350 LRRC37AA6NMS7 1700 aa18.61■□□□□ 0.57
CDK7-215ENST00000629350 TSR2Q969E8 191 aaKnown RBP18.61■□□□□ 0.57
CDK7-215ENST00000629350 TAOK3Q9H2K8 898 aa18.61■□□□□ 0.57
CDK7-215ENST00000629350 IFT57Q9NWB7 429 aa18.61■□□□□ 0.57
CDK7-215ENST00000629350 PCNTO95613 3336 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms