RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 IFIT2P09913 472 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-207ENST00000628646 NBPF10Q6P3W6 841 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-207ENST00000628646 NBPF15Q8N660 670 aa15.29■□□□□ 0.04
SYNGAP1-207ENST00000628646 LRRC37A3O60309 1634 aa15.29■□□□□ 0.04
SYNGAP1-207ENST00000628646 ABCC6O95255 1503 aa15.29■□□□□ 0.04
SYNGAP1-207ENST00000628646 NFKBIBQ15653 356 aa15.28■□□□□ 0.04
SYNGAP1-207ENST00000628646 LMBR1LQ6UX01 489 aa15.28■□□□□ 0.04
SYNGAP1-207ENST00000628646 GIGYF2Q6Y7W6 1299 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-207ENST00000628646 CCDC191Q8NCU4 936 aa15.28■□□□□ 0.04
SYNGAP1-207ENST00000628646 SIRT2Q8IXJ6 389 aa15.28■□□□□ 0.04
SYNGAP1-207ENST00000628646 ANKRD18BA2A2Z9 1011 aa15.27■□□□□ 0.04
SYNGAP1-207ENST00000628646 COL15A1P39059 1388 aa15.27■□□□□ 0.03
SYNGAP1-207ENST00000628646 NUCB1Q02818 461 aa15.27■□□□□ 0.03
SYNGAP1-207ENST00000628646 CCDC152Q4G0S7 254 aa15.27■□□□□ 0.03
SYNGAP1-207ENST00000628646 LNPKQ9C0E8 428 aa15.27■□□□□ 0.03
SYNGAP1-207ENST00000628646 ANTXR1Q9H6X2 564 aa15.26■□□□□ 0.03
SYNGAP1-207ENST00000628646 EXOC6BQ9Y2D4 811 aa15.26■□□□□ 0.03
SYNGAP1-207ENST00000628646 TRIM6-TRIM34B2RNG4 842 aa15.26■□□□□ 0.03
SYNGAP1-207ENST00000628646 CEP126Q9P2H0 1117 aa15.26■□□□□ 0.03
SYNGAP1-207ENST00000628646 HLFQ16534 295 aa15.26■□□□□ 0.03
SYNGAP1-207ENST00000628646 MMP10P09238 476 aa15.26■□□□□ 0.03
SYNGAP1-207ENST00000628646 CLASRPQ8N2M8 674 aaKnown RBP15.26■□□□□ 0.03
SYNGAP1-207ENST00000628646 METTL24Q5JXM2 366 aa15.25■□□□□ 0.03
SYNGAP1-207ENST00000628646 LDHAL6AQ6ZMR3 332 aa15.25■□□□□ 0.03
SYNGAP1-207ENST00000628646 RPAP2Q8IXW5 612 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-207ENST00000628646 CDC5LQ99459 802 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-207ENST00000628646 ANKIB1Q9P2G1 1089 aa15.25■□□□□ 0.03
SYNGAP1-207ENST00000628646 NARFQ9UHQ1 456 aa15.25■□□□□ 0.03
SYNGAP1-207ENST00000628646 GCKRQ14397 625 aa15.25■□□□□ 0.03
SYNGAP1-207ENST00000628646 SLC15A2Q16348 729 aa15.25■□□□□ 0.03
SYNGAP1-207ENST00000628646 PLSCR1O15162 318 aa15.25■□□□□ 0.03
SYNGAP1-207ENST00000628646 NEURL1BA8MQ27 555 aa15.24■□□□□ 0.03
SYNGAP1-207ENST00000628646 SSFA2P28290 1259 aa15.24■□□□□ 0.03
SYNGAP1-207ENST00000628646 ADRA2BP18089 450 aa15.24■□□□□ 0.03
SYNGAP1-207ENST00000628646 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
SYNGAP1-207ENST00000628646 DISP2A7MBM2 1401 aa15.24■□□□□ 0.03
SYNGAP1-207ENST00000628646 SERPINB2P05120 415 aa15.23■□□□□ 0.03
SYNGAP1-207ENST00000628646 NBPF7P0C2Y1 421 aaPredicted RBP15.23■□□□□ 0.03
SYNGAP1-207ENST00000628646 IL1RAPL2Q9NP60 686 aa15.23■□□□□ 0.03
SYNGAP1-207ENST00000628646 RGPD2P0DJD1 1756 aa15.23■□□□□ 0.03
SYNGAP1-207ENST00000628646 EIF5P55010 431 aaKnown RBP15.23■□□□□ 0.03
SYNGAP1-207ENST00000628646 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
SYNGAP1-207ENST00000628646 SLC4A9Q96Q91 983 aa15.23■□□□□ 0.03
SYNGAP1-207ENST00000628646 ERVV-1B6SEH8 477 aa15.22■□□□□ 0.03
SYNGAP1-207ENST00000628646 PLEKHG2Q9H7P9 1386 aa15.22■□□□□ 0.03
SYNGAP1-207ENST00000628646 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
SYNGAP1-207ENST00000628646 ANKRD18AQ8IVF6 992 aa15.22■□□□□ 0.03
SYNGAP1-207ENST00000628646 LRRC4BQ9NT99 713 aa15.22■□□□□ 0.03
SYNGAP1-207ENST00000628646 ERC1Q8IUD2 1116 aa15.21■□□□□ 0.03
SYNGAP1-207ENST00000628646 ATP10DQ9P241 1426 aa15.21■□□□□ 0.03
SYNGAP1-207ENST00000628646 INTS3Q68E01 1043 aaKnown RBP15.21■□□□□ 0.03
SYNGAP1-207ENST00000628646 INTS5Q6P9B9 1019 aaKnown RBP15.21■□□□□ 0.03
SYNGAP1-207ENST00000628646 BICC1Q9H694 974 aaKnown RBP15.21■□□□□ 0.03
SYNGAP1-207ENST00000628646 BEND3Q5T5X7 828 aa15.21■□□□□ 0.03
SYNGAP1-207ENST00000628646 CNTNAP4Q9C0A0 1308 aa15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 H0YIN7 160 aa15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 N4BP2Q86UW6 1770 aaPredicted RBP15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 PDE8AO60658 829 aa15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 HSP90AA1P07900 732 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 COL22A1Q8NFW1 1626 aaPredicted RBP15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 PLCH1Q4KWH8 1693 aa15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 TBC1D9BQ66K14 1250 aa15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 CLEC4GQ6UXB4 293 aa15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 RILPL2Q969X0 211 aa15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 NLRP10Q86W26 655 aa15.2■□□□□ 0.02
SYNGAP1-207ENST00000628646 FAM208AQ9UK61 1670 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-207ENST00000628646 LRRCC1Q9C099 1032 aa15.19■□□□□ 0.02
SYNGAP1-207ENST00000628646 PA2G4Q9UQ80 394 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-207ENST00000628646 CHD1LQ86WJ1 897 aa15.19■□□□□ 0.02
SYNGAP1-207ENST00000628646 SUCLG2Q96I99 432 aa15.19■□□□□ 0.02
SYNGAP1-207ENST00000628646 ZBTB38Q8NAP3 1195 aaPredicted RBP15.18■□□□□ 0.02
SYNGAP1-207ENST00000628646 SUSD4Q5VX71 490 aa15.18■□□□□ 0.02
SYNGAP1-207ENST00000628646 AACSQ86V21 672 aa15.18■□□□□ 0.02
SYNGAP1-207ENST00000628646 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
SYNGAP1-207ENST00000628646 NSFL1CQ9UNZ2 370 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-207ENST00000628646 PARP4Q9UKK3 1724 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-207ENST00000628646 NFIXQ14938 502 aa15.18■□□□□ 0.02
SYNGAP1-207ENST00000628646 USP44Q9H0E7 712 aa15.18■□□□□ 0.02
SYNGAP1-207ENST00000628646 TUBGCP6Q96RT7 1819 aa15.18■□□□□ 0.02
SYNGAP1-207ENST00000628646 ERFEQ4G0M1 354 aa15.17■□□□□ 0.02
SYNGAP1-207ENST00000628646 HELBQ8NG08 1087 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-207ENST00000628646 GCC1Q96CN9 775 aa15.17■□□□□ 0.02
SYNGAP1-207ENST00000628646 LMO7Q8WWI1 1683 aa15.17■□□□□ 0.02
SYNGAP1-207ENST00000628646 PCCAP05165 728 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-207ENST00000628646 ITGA6P23229 1130 aa15.17■□□□□ 0.02
SYNGAP1-207ENST00000628646 PDIA6Q15084 440 aa15.17■□□□□ 0.02
SYNGAP1-207ENST00000628646 C2CD5Q86YS7 1000 aa15.17■□□□□ 0.02
SYNGAP1-207ENST00000628646 RBM17Q96I25 401 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-207ENST00000628646 PDE6BP35913 854 aa15.16■□□□□ 0.02
SYNGAP1-207ENST00000628646 KLHDC4Q8TBB5 520 aa15.16■□□□□ 0.02
SYNGAP1-207ENST00000628646 CCDC158Q5M9N0 1113 aa15.16■□□□□ 0.02
SYNGAP1-207ENST00000628646 UPF1Q92900 1129 aaKnown RBP eCLIP15.16■□□□□ 0.02
SYNGAP1-207ENST00000628646 SMARCA5O60264 1052 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-207ENST00000628646 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
SYNGAP1-207ENST00000628646 ZNF594Q96JF6 807 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-207ENST00000628646 CAMTA2O94983 1202 aa15.15■□□□□ 0.02
SYNGAP1-207ENST00000628646 IFIT1P09914 478 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-207ENST00000628646 ZNF827Q17R98 1081 aa15.15■□□□□ 0.02
SYNGAP1-207ENST00000628646 DNAJC2Q99543 621 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms