RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
LINC01943-202ENST00000628090 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
LINC01943-202ENST00000628090 PCDHB15Q9Y5E8 787 aa12.65□□□□□ -0.38
LINC01943-202ENST00000628090 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
LINC01943-202ENST00000628090 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
LINC01943-202ENST00000628090 ALDH1L1O75891 902 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 STARD3NLO95772 234 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 IGHDP01880 384 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 TM4SF1P30408 202 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 TGFB2P61812 414 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 USPL1Q5W0Q7 1092 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 BCS1LQ9Y276 419 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 C4AP0C0L4 1744 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 KIAA1551Q9HCM1 1747 aa12.64□□□□□ -0.39
LINC01943-202ENST00000628090 C10orf71Q711Q0 1435 aa12.63□□□□□ -0.39
LINC01943-202ENST00000628090 KCPQ6ZWJ8 1503 aa12.63□□□□□ -0.39
LINC01943-202ENST00000628090 KIF13BQ9NQT8 1826 aa12.63□□□□□ -0.39
LINC01943-202ENST00000628090 F6X3S4 739 aa12.63□□□□□ -0.39
LINC01943-202ENST00000628090 UBTFL1P0CB47 393 aaPredicted RBP12.63□□□□□ -0.39
LINC01943-202ENST00000628090 PHAXQ9H814 394 aaKnown RBP12.63□□□□□ -0.39
LINC01943-202ENST00000628090 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
LINC01943-202ENST00000628090 ADCY9O60503 1353 aa12.62□□□□□ -0.39
LINC01943-202ENST00000628090 PI4KAP2A4QPH2 592 aa12.62□□□□□ -0.39
LINC01943-202ENST00000628090 POLRMTO00411 1230 aaKnown RBP12.62□□□□□ -0.39
LINC01943-202ENST00000628090 CHRNA5P30532 468 aa12.62□□□□□ -0.39
LINC01943-202ENST00000628090 PI4KAP1Q8N8J0 262 aa12.62□□□□□ -0.39
LINC01943-202ENST00000628090 BCL2L12Q9HB09 334 aa12.62□□□□□ -0.39
LINC01943-202ENST00000628090 C9orf78Q9NZ63 289 aaPredicted RBP12.62□□□□□ -0.39
LINC01943-202ENST00000628090 ZPR1O75312 459 aa12.61□□□□□ -0.39
LINC01943-202ENST00000628090 MYL6BP14649 208 aa12.61□□□□□ -0.39
LINC01943-202ENST00000628090 AIMP1Q12904 312 aaKnown RBP12.61□□□□□ -0.39
LINC01943-202ENST00000628090 ARHGAP27Q6ZUM4 889 aa12.61□□□□□ -0.39
LINC01943-202ENST00000628090 ANKRD44Q8N8A2 993 aa12.61□□□□□ -0.39
LINC01943-202ENST00000628090 MAP3K2Q9Y2U5 619 aa12.61□□□□□ -0.39
LINC01943-202ENST00000628090 RGS3P49796 1198 aa12.6□□□□□ -0.39
LINC01943-202ENST00000628090 NFIXQ14938 502 aa12.6□□□□□ -0.39
LINC01943-202ENST00000628090 ANKRD13DQ6ZTN6 518 aa12.6□□□□□ -0.39
LINC01943-202ENST00000628090 GPBP1L1Q9HC44 474 aaPredicted RBP12.6□□□□□ -0.39
LINC01943-202ENST00000628090 NARFQ9UHQ1 456 aa12.6□□□□□ -0.39
LINC01943-202ENST00000628090 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
LINC01943-202ENST00000628090 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
LINC01943-202ENST00000628090 COPS6Q7L5N1 327 aa12.59□□□□□ -0.39
LINC01943-202ENST00000628090 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
LINC01943-202ENST00000628090 LINS1Q8NG48 757 aa12.59□□□□□ -0.39
LINC01943-202ENST00000628090 MEIS3Q99687 375 aa12.59□□□□□ -0.39
LINC01943-202ENST00000628090 C1orf115Q9H7X2 142 aa12.59□□□□□ -0.39
LINC01943-202ENST00000628090 PDZRN3Q9UPQ7 1066 aa12.59□□□□□ -0.39
LINC01943-202ENST00000628090 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
LINC01943-202ENST00000628090 COL15A1P39059 1388 aa12.58□□□□□ -0.4
LINC01943-202ENST00000628090 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
LINC01943-202ENST00000628090 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
LINC01943-202ENST00000628090 HSP90AB4PQ58FF6 505 aa12.58□□□□□ -0.4
LINC01943-202ENST00000628090 BEND3Q5T5X7 828 aa12.58□□□□□ -0.4
LINC01943-202ENST00000628090 PLBD2Q8NHP8 589 aa12.58□□□□□ -0.4
LINC01943-202ENST00000628090 XAGE3Q8WTP9 111 aa12.58□□□□□ -0.4
LINC01943-202ENST00000628090 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
LINC01943-202ENST00000628090 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
LINC01943-202ENST00000628090 IBTKQ9P2D0 1353 aaPredicted RBP12.57□□□□□ -0.4
LINC01943-202ENST00000628090 ANXA1P04083 346 aa12.57□□□□□ -0.4
LINC01943-202ENST00000628090 A1BGP04217 495 aa12.57□□□□□ -0.4
LINC01943-202ENST00000628090 NUCB1Q02818 461 aa12.57□□□□□ -0.4
LINC01943-202ENST00000628090 ANKRD45Q5TZF3 282 aa12.57□□□□□ -0.4
LINC01943-202ENST00000628090 CEP85Q6P2H3 762 aa12.57□□□□□ -0.4
LINC01943-202ENST00000628090 METTL22Q9BUU2 404 aaPredicted RBP12.57□□□□□ -0.4
LINC01943-202ENST00000628090 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
LINC01943-202ENST00000628090 KIF3CO14782 793 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 SERPINB2P05120 415 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 PIP4K2AP48426 406 aaPredicted RBP12.56□□□□□ -0.4
LINC01943-202ENST00000628090 ATP8B2P98198 1209 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 PDIA6Q15084 440 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 PROSER3Q2NL68 480 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 FAM161AQ3B820 660 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 DALRD3Q5D0E6 543 aaKnown RBP12.56□□□□□ -0.4
LINC01943-202ENST00000628090 BICDL1Q6ZP65 573 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 CHD1LQ86WJ1 897 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 DCTPP1Q9H773 170 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 TBC1D2BQ9UPU7 963 aa12.56□□□□□ -0.4
LINC01943-202ENST00000628090 BRCA1P38398 1863 aaKnown RBP12.56□□□□□ -0.4
LINC01943-202ENST00000628090 HSP90AB3PQ58FF7 597 aa12.55□□□□□ -0.4
LINC01943-202ENST00000628090 C9orf131Q5VYM1 1079 aa12.55□□□□□ -0.4
LINC01943-202ENST00000628090 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
LINC01943-202ENST00000628090 USP44Q9H0E7 712 aa12.55□□□□□ -0.4
LINC01943-202ENST00000628090 ZNF330Q9Y3S2 320 aaPredicted RBP12.55□□□□□ -0.4
LINC01943-202ENST00000628090 ARFGEF2Q9Y6D5 1785 aa12.55□□□□□ -0.4
LINC01943-202ENST00000628090 GRM8O00222 908 aa12.54□□□□□ -0.4
LINC01943-202ENST00000628090 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
LINC01943-202ENST00000628090 MYD88Q99836 296 aa12.54□□□□□ -0.4
LINC01943-202ENST00000628090 LRRFIP2Q9Y608 721 aaKnown RBP12.54□□□□□ -0.4
LINC01943-202ENST00000628090 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
LINC01943-202ENST00000628090 RAB11FIP3O75154 756 aa12.53□□□□□ -0.4
LINC01943-202ENST00000628090 PDE4AP27815 886 aa12.53□□□□□ -0.4
LINC01943-202ENST00000628090 UPF2Q9HAU5 1272 aaKnown RBP12.53□□□□□ -0.4
LINC01943-202ENST00000628090 NMRK2Q9NPI5 230 aa12.53□□□□□ -0.4
LINC01943-202ENST00000628090 A0A087WZG4 1122 aa12.52□□□□□ -0.41
LINC01943-202ENST00000628090 PRELPP51888 382 aa12.52□□□□□ -0.41
LINC01943-202ENST00000628090 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
LINC01943-202ENST00000628090 NEURL1BA8MQ27 555 aa12.51□□□□□ -0.41
LINC01943-202ENST00000628090 CAMTA2O94983 1202 aa12.51□□□□□ -0.41
LINC01943-202ENST00000628090 IL6STP40189 918 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms