RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
CPSF7-226ENST00000626926 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
CPSF7-226ENST00000626926 GPTP24298 496 aa11.52□□□□□ -0.57
CPSF7-226ENST00000626926 GTF2E1P29083 439 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-226ENST00000626926 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.57
CPSF7-226ENST00000626926 NGEFQ8N5V2 710 aa11.52□□□□□ -0.57
CPSF7-226ENST00000626926 CRAMP1Q96RY5 1269 aa11.52□□□□□ -0.57
CPSF7-226ENST00000626926 DDX21Q9NR30 783 aaKnown RBP eCLIP11.52□□□□□ -0.57
CPSF7-226ENST00000626926 FAM177BA6PVY3 158 aa11.51□□□□□ -0.57
CPSF7-226ENST00000626926 FZD9O00144 591 aa11.51□□□□□ -0.57
CPSF7-226ENST00000626926 ZNF853P0CG23 659 aa11.51□□□□□ -0.57
CPSF7-226ENST00000626926 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
CPSF7-226ENST00000626926 OLFM4Q6UX06 510 aa11.51□□□□□ -0.57
CPSF7-226ENST00000626926 PPP1R42Q7Z4L9 355 aa11.51□□□□□ -0.57
CPSF7-226ENST00000626926 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
CPSF7-226ENST00000626926 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
CPSF7-226ENST00000626926 LTBP1Q14766 1721 aa11.5□□□□□ -0.57
CPSF7-226ENST00000626926 IQCA1LA6NCM1 817 aa11.5□□□□□ -0.57
CPSF7-226ENST00000626926 DDNO94850 711 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-226ENST00000626926 EIF2S2P20042 333 aaKnown RBP11.5□□□□□ -0.57
CPSF7-226ENST00000626926 IARSP41252 1262 aaKnown RBP11.5□□□□□ -0.57
CPSF7-226ENST00000626926 RPGRQ92834 1020 aaKnown RBP11.5□□□□□ -0.57
CPSF7-226ENST00000626926 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-226ENST00000626926 DUOX1Q9NRD9 1551 aa11.5□□□□□ -0.57
CPSF7-226ENST00000626926 ANXA1P04083 346 aa11.49□□□□□ -0.57
CPSF7-226ENST00000626926 KRT24Q2M2I5 525 aa11.49□□□□□ -0.57
CPSF7-226ENST00000626926 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
CPSF7-226ENST00000626926 COPS6Q7L5N1 327 aa11.49□□□□□ -0.57
CPSF7-226ENST00000626926 NLRP10Q86W26 655 aa11.49□□□□□ -0.57
CPSF7-226ENST00000626926 UTP14AQ9BVJ6 771 aaKnown RBP11.49□□□□□ -0.57
CPSF7-226ENST00000626926 ZNF541Q9H0D2 1346 aa11.49□□□□□ -0.57
CPSF7-226ENST00000626926 HTRA3P83110 453 aa11.48□□□□□ -0.57
CPSF7-226ENST00000626926 TCIRG1Q13488 830 aa11.48□□□□□ -0.57
CPSF7-226ENST00000626926 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
CPSF7-226ENST00000626926 CHADLQ6NUI6 762 aa11.48□□□□□ -0.57
CPSF7-226ENST00000626926 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
CPSF7-226ENST00000626926 XAGE3Q8WTP9 111 aa11.48□□□□□ -0.57
CPSF7-226ENST00000626926 RBM17Q96I25 401 aaKnown RBP11.48□□□□□ -0.57
CPSF7-226ENST00000626926 TAF1DQ9H5J8 278 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-226ENST00000626926 IFT57Q9NWB7 429 aa11.48□□□□□ -0.57
CPSF7-226ENST00000626926 CHPF2Q9P2E5 772 aa11.48□□□□□ -0.57
CPSF7-226ENST00000626926 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-226ENST00000626926 TAF1P21675 1872 aa11.48□□□□□ -0.57
CPSF7-226ENST00000626926 ABCC4O15439 1325 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 PASKQ96RG2 1323 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-226ENST00000626926 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 LDHDQ86WU2 507 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 GPC2Q8N158 579 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 PLBD2Q8NHP8 589 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 NLRP3Q96P20 1036 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 RTFDC1Q9BY42 306 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-226ENST00000626926 VPS33BQ9H267 617 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 MBIPQ9NS73 344 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 ATP6V0A2Q9Y487 856 aa11.47□□□□□ -0.57
CPSF7-226ENST00000626926 SH3TC1Q8TE82 1336 aa11.46□□□□□ -0.57
CPSF7-226ENST00000626926 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
CPSF7-226ENST00000626926 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
CPSF7-226ENST00000626926 CALD1Q05682 793 aaKnown RBP11.46□□□□□ -0.57
CPSF7-226ENST00000626926 TRIM28Q13263 835 aaKnown RBP11.46□□□□□ -0.57
CPSF7-226ENST00000626926 ISCA1Q9BUE6 129 aa11.46□□□□□ -0.57
CPSF7-226ENST00000626926 APAF1O14727 1248 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 BBOX1O75936 387 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 DUSP27Q5VZP5 1158 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 SLC51AQ86UW1 340 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 HACL1Q9UJ83 578 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 COL4A1P02462 1669 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 THSD7BQ9C0I4 1608 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
CPSF7-226ENST00000626926 ITGBL1O95965 494 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-226ENST00000626926 EPHX2P34913 555 aa11.44□□□□□ -0.58
CPSF7-226ENST00000626926 GNAI1P63096 354 aa11.44□□□□□ -0.58
CPSF7-226ENST00000626926 AIMP1Q12904 312 aaKnown RBP11.44□□□□□ -0.58
CPSF7-226ENST00000626926 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
CPSF7-226ENST00000626926 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
CPSF7-226ENST00000626926 TMC4Q7Z404 712 aa11.44□□□□□ -0.58
CPSF7-226ENST00000626926 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-226ENST00000626926 SP8Q8IXZ3 490 aa11.44□□□□□ -0.58
CPSF7-226ENST00000626926 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
CPSF7-226ENST00000626926 TRPM7Q96QT4 1865 aa11.43□□□□□ -0.58
CPSF7-226ENST00000626926 SCNN1DP51172 638 aa11.43□□□□□ -0.58
CPSF7-226ENST00000626926 GRAPQ13588 217 aa11.43□□□□□ -0.58
CPSF7-226ENST00000626926 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
CPSF7-226ENST00000626926 GRAPLQ8TC17 118 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-226ENST00000626926 TRMT112Q9UI30 125 aaKnown RBP11.43□□□□□ -0.58
CPSF7-226ENST00000626926 LAS1LQ9Y4W2 734 aaKnown RBP11.43□□□□□ -0.58
CPSF7-226ENST00000626926 MYH3P11055 1940 aa11.43□□□□□ -0.58
CPSF7-226ENST00000626926 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
CPSF7-226ENST00000626926 HCLS1P14317 486 aaPredicted RBP11.42□□□□□ -0.58
CPSF7-226ENST00000626926 EIF6P56537 245 aaKnown RBP11.42□□□□□ -0.58
CPSF7-226ENST00000626926 SF3B3Q15393 1217 aaKnown RBP11.42□□□□□ -0.58
CPSF7-226ENST00000626926 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
CPSF7-226ENST00000626926 SUPT20HQ8NEM7 779 aa11.42□□□□□ -0.58
CPSF7-226ENST00000626926 PSME4Q14997 1843 aa11.42□□□□□ -0.58
CPSF7-226ENST00000626926 CNTNAP1P78357 1384 aa11.41□□□□□ -0.58
CPSF7-226ENST00000626926 KIAA2012Q0VF49 1180 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms