RNA–Protein interactions for RNA: ENST00000625924.1

RUNX2-211, Transcript of runt related transcription factor 2, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX2, Length 1,458 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX2-211	ENST00000625924	CRY2	Q49AN0	593 aa		32.59	■■■□□ 2.81
RUNX2-211	ENST00000625924	HSP90AB3P	Q58FF7	597 aa		32.59	■■■□□ 2.81
RUNX2-211	ENST00000625924	C3orf67	Q6ZVT6	689 aa		32.59	■■■□□ 2.81
RUNX2-211	ENST00000625924	NLRP10	Q86W26	655 aa		32.59	■■■□□ 2.81
RUNX2-211	ENST00000625924	PLBD2	Q8NHP8	589 aa		32.59	■■■□□ 2.81
RUNX2-211	ENST00000625924	UTP14A	Q9BVJ6	771 aa	Known RBP	32.59	■■■□□ 2.81
RUNX2-211	ENST00000625924	PHAX	Q9H814	394 aa	Known RBP	32.59	■■■□□ 2.81
RUNX2-211	ENST00000625924	OLFM4	Q6UX06	510 aa		32.58	■■■□□ 2.81
RUNX2-211	ENST00000625924	NCBP3	Q53F19	620 aa	Known RBP	32.57	■■■□□ 2.8
RUNX2-211	ENST00000625924	SYNE4	Q8N205	404 aa		32.57	■■■□□ 2.8
RUNX2-211	ENST00000625924	RIC1	Q4ADV7	1423 aa		32.55	■■■□□ 2.8
RUNX2-211	ENST00000625924	KIF3C	O14782	793 aa		32.54	■■■□□ 2.8
RUNX2-211	ENST00000625924	NMRK2	Q9NPI5	230 aa		32.54	■■■□□ 2.8
RUNX2-211	ENST00000625924	IL16	Q14005	1332 aa		32.54	■■■□□ 2.8
RUNX2-211	ENST00000625924	ATP5J2-PTCD1	G3V325	749 aa		32.54	■■■□□ 2.8
RUNX2-211	ENST00000625924	ALDH1B1	P30837	517 aa		32.54	■■■□□ 2.8
RUNX2-211	ENST00000625924	DICER1	Q9UPY3	1922 aa	Known RBP	32.53	■■■□□ 2.8
RUNX2-211	ENST00000625924	TIAM2	Q8IVF5	1701 aa		32.53	■■■□□ 2.8
RUNX2-211	ENST00000625924	TCERG1	O14776	1098 aa	Known RBP	32.52	■■■□□ 2.8
RUNX2-211	ENST00000625924	SLC10A5	Q5PT55	438 aa		32.52	■■■□□ 2.8
RUNX2-211	ENST00000625924	RPGR	Q92834	1020 aa	Known RBP	32.52	■■■□□ 2.8
RUNX2-211	ENST00000625924	TAOK3	Q9H2K8	898 aa		32.52	■■■□□ 2.8
RUNX2-211	ENST00000625924	TRMT112	Q9UI30	125 aa	Known RBP	32.52	■■■□□ 2.8
RUNX2-211	ENST00000625924	LAMB2	P55268	1798 aa		32.51	■■■□□ 2.8
RUNX2-211	ENST00000625924	CCDC30	Q5VVM6	783 aa		32.51	■■■□□ 2.79
RUNX2-211	ENST00000625924	HCLS1	P14317	486 aa	Predicted RBP	32.5	■■■□□ 2.79
RUNX2-211	ENST00000625924	WDR63	Q8IWG1	891 aa		32.5	■■■□□ 2.79
RUNX2-211	ENST00000625924	NLRP3	Q96P20	1036 aa		32.5	■■■□□ 2.79
RUNX2-211	ENST00000625924	ISCA1	Q9BUE6	129 aa		32.5	■■■□□ 2.79
RUNX2-211	ENST00000625924	HOXA10	P31260	410 aa	Predicted RBP	32.49	■■■□□ 2.79
RUNX2-211	ENST00000625924	TWISTNB	Q3B726	338 aa	Predicted RBP	32.49	■■■□□ 2.79
RUNX2-211	ENST00000625924	CCDC93	Q567U6	631 aa		32.49	■■■□□ 2.79
RUNX2-211	ENST00000625924	SOGA3	Q5TF21	947 aa		32.49	■■■□□ 2.79
RUNX2-211	ENST00000625924	RIC3	Q7Z5B4	369 aa		32.49	■■■□□ 2.79
RUNX2-211	ENST00000625924	SLC51A	Q86UW1	340 aa		32.49	■■■□□ 2.79
RUNX2-211	ENST00000625924	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.49	■■■□□ 2.79
RUNX2-211	ENST00000625924	FANCI	Q9NVI1	1328 aa		32.49	■■■□□ 2.79
RUNX2-211	ENST00000625924	LTBP3	Q9NS15	1303 aa		32.48	■■■□□ 2.79
RUNX2-211	ENST00000625924	GOLGA2	Q08379	1002 aa		32.47	■■■□□ 2.79
RUNX2-211	ENST00000625924	RNF123	Q5XPI4	1314 aa		32.46	■■■□□ 2.79
RUNX2-211	ENST00000625924	SH3TC1	Q8TE82	1336 aa		32.46	■■■□□ 2.79
RUNX2-211	ENST00000625924	RBM17	Q96I25	401 aa	Known RBP	32.46	■■■□□ 2.79
RUNX2-211	ENST00000625924	TAF1	P21675	1872 aa		32.45	■■■□□ 2.79
RUNX2-211	ENST00000625924	KDM2B	Q8NHM5	1336 aa		32.45	■■■□□ 2.78
RUNX2-211	ENST00000625924	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.45	■■■□□ 2.78
RUNX2-211	ENST00000625924	CEP350	Q5VT06	3117 aa		32.45	■■■□□ 2.78
RUNX2-211	ENST00000625924	DDX60	Q8IY21	1712 aa	Known RBP	32.44	■■■□□ 2.78
RUNX2-211	ENST00000625924	RTL5	Q5HYW3	569 aa	Predicted RBP	32.44	■■■□□ 2.78
RUNX2-211	ENST00000625924	FAM89A	Q96GI7	184 aa		32.44	■■■□□ 2.78
RUNX2-211	ENST00000625924	CRAMP1	Q96RY5	1269 aa		32.44	■■■□□ 2.78
RUNX2-211	ENST00000625924	RRAGC	Q9HB90	399 aa		32.44	■■■□□ 2.78
RUNX2-211	ENST00000625924	MYD88	Q99836	296 aa		32.42	■■■□□ 2.78
RUNX2-211	ENST00000625924	CHMP4A	Q9BY43	222 aa		32.42	■■■□□ 2.78
RUNX2-211	ENST00000625924	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.42	■■■□□ 2.78
RUNX2-211	ENST00000625924	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.42	■■■□□ 2.78
RUNX2-211	ENST00000625924	EXOSC9	Q06265	439 aa	Known RBP	32.42	■■■□□ 2.78
RUNX2-211	ENST00000625924	G2E3	Q7L622	706 aa		32.42	■■■□□ 2.78
RUNX2-211	ENST00000625924	GLTPD2	A6NH11	291 aa		32.41	■■■□□ 2.78
RUNX2-211	ENST00000625924	TRIM28	Q13263	835 aa	Known RBP	32.41	■■■□□ 2.78
RUNX2-211	ENST00000625924	RTKN2	Q8IZC4	609 aa		32.41	■■■□□ 2.78
RUNX2-211	ENST00000625924	STK31	Q9BXU1	1019 aa		32.41	■■■□□ 2.78
RUNX2-211	ENST00000625924	SNED1	Q8TER0	1413 aa		32.41	■■■□□ 2.78
RUNX2-211	ENST00000625924	ABCC4	O15439	1325 aa		32.39	■■■□□ 2.78
RUNX2-211	ENST00000625924	PPEF1	O14829	653 aa	Predicted RBP	32.39	■■■□□ 2.78
RUNX2-211	ENST00000625924	SLC4A2	P04920	1241 aa		32.39	■■■□□ 2.78
RUNX2-211	ENST00000625924	MAP3K2	Q9Y2U5	619 aa		32.38	■■■□□ 2.77
RUNX2-211	ENST00000625924	VAMP4	O75379	141 aa		32.37	■■■□□ 2.77
RUNX2-211	ENST00000625924	PI4KAP2	A4QPH2	592 aa		32.36	■■■□□ 2.77
RUNX2-211	ENST00000625924	DDX58	O95786	925 aa	Known RBP	32.36	■■■□□ 2.77
RUNX2-211	ENST00000625924	PI4KAP1	Q8N8J0	262 aa		32.36	■■■□□ 2.77
RUNX2-211	ENST00000625924	METTL22	Q9BUU2	404 aa	Predicted RBP	32.36	■■■□□ 2.77
RUNX2-211	ENST00000625924	JARID2	Q92833	1246 aa	Predicted RBP	32.35	■■■□□ 2.77
RUNX2-211	ENST00000625924	TOMM70	O94826	608 aa		32.35	■■■□□ 2.77
RUNX2-211	ENST00000625924	KSR2	Q6VAB6	950 aa		32.35	■■■□□ 2.77
RUNX2-211	ENST00000625924	CACNA1F	O60840	1977 aa		32.34	■■■□□ 2.77
RUNX2-211	ENST00000625924	ZNF521	Q96K83	1311 aa		32.34	■■■□□ 2.77
RUNX2-211	ENST00000625924	CC2D2B	Q6DHV5	1058 aa		32.34	■■■□□ 2.77
RUNX2-211	ENST00000625924	IRS4	O14654	1257 aa	Predicted RBP	32.33	■■■□□ 2.77
RUNX2-211	ENST00000625924	DPY19L2	Q6NUT2	758 aa		32.33	■■■□□ 2.77
RUNX2-211	ENST00000625924	DDX46	Q7L014	1031 aa	Known RBP	32.33	■■■□□ 2.77
RUNX2-211	ENST00000625924	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.32	■■■□□ 2.76
RUNX2-211	ENST00000625924	CCDC191	Q8NCU4	936 aa		32.32	■■■□□ 2.76
RUNX2-211	ENST00000625924	PSMD1	Q99460	953 aa		32.32	■■■□□ 2.76
RUNX2-211	ENST00000625924	ATP6V0A2	Q9Y487	856 aa		32.32	■■■□□ 2.76
RUNX2-211	ENST00000625924	POTEC	B2RU33	542 aa		32.31	■■■□□ 2.76
RUNX2-211	ENST00000625924	DDN	O94850	711 aa	Predicted RBP	32.31	■■■□□ 2.76
RUNX2-211	ENST00000625924	IARS	P41252	1262 aa	Known RBP	32.31	■■■□□ 2.76
RUNX2-211	ENST00000625924	MYH16	Q9H6N6	1097 aa		32.31	■■■□□ 2.76
RUNX2-211	ENST00000625924	IGKV5-2	P06315	115 aa		32.3	■■■□□ 2.76
RUNX2-211	ENST00000625924	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.3	■■■□□ 2.76
RUNX2-211	ENST00000625924	CWC25	Q9NXE8	425 aa	Predicted RBP	32.3	■■■□□ 2.76
RUNX2-211	ENST00000625924	BBOX1	O75936	387 aa		32.29	■■■□□ 2.76
RUNX2-211	ENST00000625924	SF3B3	Q15393	1217 aa	Known RBP	32.29	■■■□□ 2.76
RUNX2-211	ENST00000625924	COL4A1	P02462	1669 aa		32.29	■■■□□ 2.76
RUNX2-211	ENST00000625924	FLII	Q13045	1269 aa		32.29	■■■□□ 2.76
RUNX2-211	ENST00000625924	GRAP	Q13588	217 aa		32.29	■■■□□ 2.76
RUNX2-211	ENST00000625924	GRAPL	Q8TC17	118 aa	Predicted RBP	32.29	■■■□□ 2.76
RUNX2-211	ENST00000625924	WDR90	Q96KV7	1748 aa		32.28	■■■□□ 2.76
RUNX2-211	ENST00000625924	COL4A5	P29400	1685 aa		32.28	■■■□□ 2.76
RUNX2-211	ENST00000625924	VEGFA	P15692	232 aa	Predicted RBP	32.28	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms