RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 RPGRQ92834 1020 aaKnown RBP25.07■■□□□ 1.6
ATG4B-226ENST00000625810 L3MBTL3Q96JM7 780 aaPredicted RBP25.07■■□□□ 1.6
ATG4B-226ENST00000625810 ZNF541Q9H0D2 1346 aa25.07■■□□□ 1.6
ATG4B-226ENST00000625810 PCNTO95613 3336 aa25.07■■□□□ 1.6
ATG4B-226ENST00000625810 CHL1O00533 1208 aa25.06■■□□□ 1.6
ATG4B-226ENST00000625810 NTSR2O95665 410 aa25.06■■□□□ 1.6
ATG4B-226ENST00000625810 PROSER3Q2NL68 480 aa25.06■■□□□ 1.6
ATG4B-226ENST00000625810 PARP10Q53GL7 1025 aa25.06■■□□□ 1.6
ATG4B-226ENST00000625810 TRIM35Q9UPQ4 493 aa25.06■■□□□ 1.6
ATG4B-226ENST00000625810 HOXA10P31260 410 aaPredicted RBP25.05■■□□□ 1.6
ATG4B-226ENST00000625810 IARSP41252 1262 aaKnown RBP25.05■■□□□ 1.6
ATG4B-226ENST00000625810 AIMP1Q12904 312 aaKnown RBP25.05■■□□□ 1.6
ATG4B-226ENST00000625810 CHADLQ6NUI6 762 aa25.05■■□□□ 1.6
ATG4B-226ENST00000625810 SYNE4Q8N205 404 aa25.05■■□□□ 1.6
ATG4B-226ENST00000625810 IQCA1LA6NCM1 817 aa25.04■■□□□ 1.6
ATG4B-226ENST00000625810 COPS6Q7L5N1 327 aa25.04■■□□□ 1.6
ATG4B-226ENST00000625810 SCN4AP35499 1836 aa25.03■■□□□ 1.6
ATG4B-226ENST00000625810 C3orf67Q6ZVT6 689 aa25.03■■□□□ 1.6
ATG4B-226ENST00000625810 PSMD1Q99460 953 aa25.03■■□□□ 1.6
ATG4B-226ENST00000625810 KRT24Q2M2I5 525 aa25.02■■□□□ 1.6
ATG4B-226ENST00000625810 XAGE3Q8WTP9 111 aa25.02■■□□□ 1.6
ATG4B-226ENST00000625810 RBM17Q96I25 401 aaKnown RBP25.02■■□□□ 1.6
ATG4B-226ENST00000625810 UTP14AQ9BVJ6 771 aaKnown RBP25.02■■□□□ 1.6
ATG4B-226ENST00000625810 TAF1DQ9H5J8 278 aaPredicted RBP25.02■■□□□ 1.6
ATG4B-226ENST00000625810 FZD9O00144 591 aa25.01■■□□□ 1.59
ATG4B-226ENST00000625810 HSP90AB3PQ58FF7 597 aa25.01■■□□□ 1.59
ATG4B-226ENST00000625810 SLC51AQ86UW1 340 aa25.01■■□□□ 1.59
ATG4B-226ENST00000625810 NLRP3Q96P20 1036 aa25.01■■□□□ 1.59
ATG4B-226ENST00000625810 DDX21Q9NR30 783 aaKnown RBP eCLIP25.01■■□□□ 1.59
ATG4B-226ENST00000625810 COL4A5P29400 1685 aa25.01■■□□□ 1.59
ATG4B-226ENST00000625810 CC2D2BQ6DHV5 1058 aa25■■□□□ 1.59
ATG4B-226ENST00000625810 LDHDQ86WU2 507 aa25■■□□□ 1.59
ATG4B-226ENST00000625810 CRAMP1Q96RY5 1269 aa25■■□□□ 1.59
ATG4B-226ENST00000625810 HDGFL1Q5TGJ6 251 aa24.98■■□□□ 1.59
ATG4B-226ENST00000625810 CFAP44Q96MT7 982 aa24.98■■□□□ 1.59
ATG4B-226ENST00000625810 ANKRD36CQ5JPF3 1778 aa24.98■■□□□ 1.59
ATG4B-226ENST00000625810 TCERG1O14776 1098 aaKnown RBP24.97■■□□□ 1.59
ATG4B-226ENST00000625810 PPEF1O14829 653 aaPredicted RBP24.97■■□□□ 1.59
ATG4B-226ENST00000625810 CREBZFQ9NS37 354 aa24.97■■□□□ 1.59
ATG4B-226ENST00000625810 CHPF2Q9P2E5 772 aa24.97■■□□□ 1.59
ATG4B-226ENST00000625810 HACL1Q9UJ83 578 aa24.97■■□□□ 1.59
ATG4B-226ENST00000625810 ADAMTSL1Q8N6G6 1762 aa24.97■■□□□ 1.59
ATG4B-226ENST00000625810 PASKQ96RG2 1323 aa24.96■■□□□ 1.59
ATG4B-226ENST00000625810 APAF1O14727 1248 aa24.96■■□□□ 1.59
ATG4B-226ENST00000625810 TCIRG1Q13488 830 aa24.96■■□□□ 1.59
ATG4B-226ENST00000625810 SLC10A5Q5PT55 438 aa24.96■■□□□ 1.59
ATG4B-226ENST00000625810 JDP2Q8WYK2 163 aa24.96■■□□□ 1.59
ATG4B-226ENST00000625810 TMX4Q9H1E5 349 aaPredicted RBP24.96■■□□□ 1.59
ATG4B-226ENST00000625810 RNF123Q5XPI4 1314 aa24.95■■□□□ 1.58
ATG4B-226ENST00000625810 HOXB7P09629 217 aa24.95■■□□□ 1.58
ATG4B-226ENST00000625810 EPHX2P34913 555 aa24.95■■□□□ 1.58
ATG4B-226ENST00000625810 GRIPAP1Q4V328 841 aa24.95■■□□□ 1.58
ATG4B-226ENST00000625810 GPC2Q8N158 579 aa24.95■■□□□ 1.58
ATG4B-226ENST00000625810 EAPPQ56P03 285 aaPredicted RBP24.94■■□□□ 1.58
ATG4B-226ENST00000625810 NLRP10Q86W26 655 aa24.94■■□□□ 1.58
ATG4B-226ENST00000625810 DBF4Q9UBU7 674 aaPredicted RBP24.94■■□□□ 1.58
ATG4B-226ENST00000625810 COL13A1Q5TAT6 717 aaPredicted RBP24.93■■□□□ 1.58
ATG4B-226ENST00000625810 DUSP27Q5VZP5 1158 aa24.93■■□□□ 1.58
ATG4B-226ENST00000625810 MBIPQ9NS73 344 aa24.93■■□□□ 1.58
ATG4B-226ENST00000625810 TRMT112Q9UI30 125 aaKnown RBP24.93■■□□□ 1.58
ATG4B-226ENST00000625810 CALD1Q05682 793 aaKnown RBP24.92■■□□□ 1.58
ATG4B-226ENST00000625810 LAMB2P55268 1798 aa24.92■■□□□ 1.58
ATG4B-226ENST00000625810 ABCC4O15439 1325 aa24.91■■□□□ 1.58
ATG4B-226ENST00000625810 ITGBL1O95965 494 aaPredicted RBP24.91■■□□□ 1.58
ATG4B-226ENST00000625810 HSPA1AP0DMV8 641 aaKnown RBP24.91■■□□□ 1.58
ATG4B-226ENST00000625810 HSPA1BP0DMV9 641 aaKnown RBP24.91■■□□□ 1.58
ATG4B-226ENST00000625810 HCLS1P14317 486 aaPredicted RBP24.91■■□□□ 1.58
ATG4B-226ENST00000625810 EIF6P56537 245 aaKnown RBP24.91■■□□□ 1.58
ATG4B-226ENST00000625810 ANKRD13DQ6ZTN6 518 aa24.91■■□□□ 1.58
ATG4B-226ENST00000625810 LARGE2Q8N3Y3 721 aa24.91■■□□□ 1.58
ATG4B-226ENST00000625810 PLBD2Q8NHP8 589 aa24.91■■□□□ 1.58
ATG4B-226ENST00000625810 MKRN1Q9UHC7 482 aaKnown RBP24.91■■□□□ 1.58
ATG4B-226ENST00000625810 ATP6V0A2Q9Y487 856 aa24.91■■□□□ 1.58
ATG4B-226ENST00000625810 LTBP1Q14766 1721 aa24.91■■□□□ 1.58
ATG4B-226ENST00000625810 SH3TC1Q8TE82 1336 aa24.9■■□□□ 1.58
ATG4B-226ENST00000625810 PNMA8AQ86V59 439 aaPredicted RBP24.9■■□□□ 1.58
ATG4B-226ENST00000625810 HYPKQ9NX55 129 aa24.9■■□□□ 1.58
ATG4B-226ENST00000625810 GNAI1P63096 354 aa24.89■■□□□ 1.58
ATG4B-226ENST00000625810 IFT57Q9NWB7 429 aa24.89■■□□□ 1.58
ATG4B-226ENST00000625810 CLEC11AQ9Y240 323 aa24.89■■□□□ 1.58
ATG4B-226ENST00000625810 GJA3Q9Y6H8 435 aa24.89■■□□□ 1.58
ATG4B-226ENST00000625810 ZNF853P0CG23 659 aa24.88■■□□□ 1.57
ATG4B-226ENST00000625810 ZNF428Q96B54 188 aa24.88■■□□□ 1.57
ATG4B-226ENST00000625810 CNTNAP1P78357 1384 aa24.88■■□□□ 1.57
ATG4B-226ENST00000625810 DDX46Q7L014 1031 aaKnown RBP24.87■■□□□ 1.57
ATG4B-226ENST00000625810 ELL2O00472 640 aaPredicted RBP24.86■■□□□ 1.57
ATG4B-226ENST00000625810 PPIP5K2O43314 1243 aa24.86■■□□□ 1.57
ATG4B-226ENST00000625810 BBOX1O75936 387 aa24.86■■□□□ 1.57
ATG4B-226ENST00000625810 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
ATG4B-226ENST00000625810 SCNN1DP51172 638 aa24.86■■□□□ 1.57
ATG4B-226ENST00000625810 AOC3Q16853 763 aa24.86■■□□□ 1.57
ATG4B-226ENST00000625810 NIM1KQ8IY84 436 aa24.86■■□□□ 1.57
ATG4B-226ENST00000625810 ATP5J2-PTCD1G3V325 749 aa24.85■■□□□ 1.57
ATG4B-226ENST00000625810 MAP1SQ66K74 1059 aaPredicted RBP24.85■■□□□ 1.57
ATG4B-226ENST00000625810 RTFDC1Q9BY42 306 aaPredicted RBP24.85■■□□□ 1.57
ATG4B-226ENST00000625810 TMEM88BA6NKF7 163 aa24.84■■□□□ 1.57
ATG4B-226ENST00000625810 LMOD1P29536 600 aaPredicted RBP24.84■■□□□ 1.57
ATG4B-226ENST00000625810 SP8Q8IXZ3 490 aa24.84■■□□□ 1.57
ATG4B-226ENST00000625810 CNTROBQ8N137 903 aa24.84■■□□□ 1.57
ATG4B-226ENST00000625810 SUPT20HQ8NEM7 779 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms