RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 FMNL2Q96PY5 1086 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 PNMA2Q9UL42 364 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 TNNQ9UQP3 1299 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 PCDHGA4Q9Y5G9 962 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 RBM47A0AV96 593 aaKnown RBP10.87□□□□□ -0.67
USB1-216ENST00000624720 CDC37Q16543 378 aaPredicted RBP10.87□□□□□ -0.67
USB1-216ENST00000624720 USHBP1Q8N6Y0 703 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 CRBNQ96SW2 442 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 CTNNA3Q9UI47 895 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 TTC21BQ7Z4L5 1316 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 LONRF3Q496Y0 759 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 TMCO4Q5TGY1 634 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 SUGP1Q8IWZ8 645 aaKnown RBP10.87□□□□□ -0.67
USB1-216ENST00000624720 LZTS2Q9BRK4 669 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
USB1-216ENST00000624720 NRXN3Q9Y4C0 1643 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 PPFIA4O75335 1185 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 NOM1Q5C9Z4 860 aaKnown RBP10.86□□□□□ -0.67
USB1-216ENST00000624720 KIF2CQ99661 725 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 SUGT1Q9Y2Z0 365 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 UBR1Q8IWV7 1749 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 PEX14O75381 377 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 PSME1Q06323 249 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 CCDC15Q0P6D6 951 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 C16orf87Q6PH81 154 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 NFXL1Q6ZNB6 911 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 ZNF446Q9NWS9 450 aa10.86□□□□□ -0.67
USB1-216ENST00000624720 MYBL2P10244 700 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 AMPHP49418 695 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 PHC3Q8NDX5 983 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 CEP89Q96ST8 783 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 SLFN5Q08AF3 891 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 KIAA2012Q0VF49 1180 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 RASA3Q14644 834 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 SULT6B1Q6IMI4 303 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 OGFOD1Q8N543 542 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 LARP6Q9BRS8 491 aaKnown RBP10.85□□□□□ -0.67
USB1-216ENST00000624720 CPS1P31327 1500 aa10.85□□□□□ -0.67
USB1-216ENST00000624720 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
USB1-216ENST00000624720 CCDC26Q8TAB7 109 aa10.84□□□□□ -0.67
USB1-216ENST00000624720 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
USB1-216ENST00000624720 IPO5O00410 1097 aaKnown RBP10.84□□□□□ -0.67
USB1-216ENST00000624720 NEBLO76041 1014 aa10.84□□□□□ -0.67
USB1-216ENST00000624720 FAXDC2Q96IV6 333 aa10.84□□□□□ -0.67
USB1-216ENST00000624720 CWC25Q9NXE8 425 aaPredicted RBP10.84□□□□□ -0.67
USB1-216ENST00000624720 MED14O60244 1454 aa10.84□□□□□ -0.67
USB1-216ENST00000624720 POLR3AO14802 1390 aaPredicted RBP10.84□□□□□ -0.67
USB1-216ENST00000624720 TMCO5BA8MYB1 307 aa10.83□□□□□ -0.68
USB1-216ENST00000624720 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
USB1-216ENST00000624720 VEZTQ9HBM0 779 aa10.83□□□□□ -0.68
USB1-216ENST00000624720 ATG3Q9NT62 314 aa10.83□□□□□ -0.68
USB1-216ENST00000624720 RWDD2BP57060 319 aa10.83□□□□□ -0.68
USB1-216ENST00000624720 RPUSD2Q8IZ73 545 aaKnown RBP10.83□□□□□ -0.68
USB1-216ENST00000624720 PANK1Q8TE04 598 aa10.83□□□□□ -0.68
USB1-216ENST00000624720 MIS18AQ9NYP9 233 aa10.83□□□□□ -0.68
USB1-216ENST00000624720 RIOK3O14730 519 aaKnown RBP10.83□□□□□ -0.68
USB1-216ENST00000624720 TMPOP42166 694 aaKnown RBP10.83□□□□□ -0.68
USB1-216ENST00000624720 WDR78Q5VTH9 848 aa10.83□□□□□ -0.68
USB1-216ENST00000624720 CABLES1Q8TDN4 633 aa10.83□□□□□ -0.68
USB1-216ENST00000624720 CCDC39Q9UFE4 941 aa10.83□□□□□ -0.68
USB1-216ENST00000624720 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.83□□□□□ -0.68
USB1-216ENST00000624720 SYNRGQ9UMZ2 1314 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 PDE3BQ13370 1112 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 PACS2Q86VP3 889 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 NFATC2IPQ8NCF5 419 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 SLC24A3Q9HC58 644 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 BLOC1S6Q9UL45 172 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 SLIT1O75093 1534 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 ZFYVE27Q5T4F4 411 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 PDLIM2Q96JY6 352 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 SH3GL3Q99963 347 aa10.82□□□□□ -0.68
USB1-216ENST00000624720 GPBP1L1Q9HC44 474 aaPredicted RBP10.82□□□□□ -0.68
USB1-216ENST00000624720 ATP7BP35670 1465 aa10.81□□□□□ -0.68
USB1-216ENST00000624720 IFT88Q13099 833 aa10.81□□□□□ -0.68
USB1-216ENST00000624720 TBC1D25Q3MII6 688 aa10.81□□□□□ -0.68
USB1-216ENST00000624720 MYLK4Q86YV6 388 aaPredicted RBP10.81□□□□□ -0.68
USB1-216ENST00000624720 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
USB1-216ENST00000624720 NKTRP30414 1462 aaKnown RBP10.81□□□□□ -0.68
USB1-216ENST00000624720 ZC3H6P61129 1189 aaKnown RBP10.81□□□□□ -0.68
USB1-216ENST00000624720 EXOSC9Q06265 439 aaKnown RBP10.81□□□□□ -0.68
USB1-216ENST00000624720 EIF4A2Q14240 407 aaKnown RBP10.81□□□□□ -0.68
USB1-216ENST00000624720 LCMT1Q9UIC8 334 aa10.81□□□□□ -0.68
USB1-216ENST00000624720 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
USB1-216ENST00000624720 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
USB1-216ENST00000624720 MAP3K19Q56UN5 1328 aa10.81□□□□□ -0.68
USB1-216ENST00000624720 TPM1P09493 284 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 CSB-PGBD3P0DP91 1061 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 MAMSTRQ6ZN01 415 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 MCM10Q7L590 875 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 FMNL3Q8IVF7 1028 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 CACTIN-AS1Q8N1I8 211 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 SLX1AQ9BQ83 275 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 LTBP4Q8N2S1 1624 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 SMC2O95347 1197 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 FAM200BP0CF97 657 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 KRT24Q2M2I5 525 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 C8orf34Q49A92 452 aa10.8□□□□□ -0.68
USB1-216ENST00000624720 CTDP1Q9Y5B0 961 aaPredicted RBP10.8□□□□□ -0.68
USB1-216ENST00000624720 ARMC3Q5W041 872 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 NCAPG2Q86XI2 1143 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms