RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 FAM177BA6PVY3 158 aa23.82■■□□□ 1.4
PCDHB5-202ENST00000623915 PDIA6Q15084 440 aa23.81■■□□□ 1.4
PCDHB5-202ENST00000623915 COL13A1Q5TAT6 717 aaPredicted RBP23.81■■□□□ 1.4
PCDHB5-202ENST00000623915 FKBP4Q02790 459 aaKnown RBP eCLIP23.8■■□□□ 1.4
PCDHB5-202ENST00000623915 L3MBTL3Q96JM7 780 aaPredicted RBP23.8■■□□□ 1.4
PCDHB5-202ENST00000623915 SCN4AP35499 1836 aa23.8■■□□□ 1.4
PCDHB5-202ENST00000623915 CHADLQ6NUI6 762 aa23.79■■□□□ 1.4
PCDHB5-202ENST00000623915 LAS1LQ9Y4W2 734 aaKnown RBP23.79■■□□□ 1.4
PCDHB5-202ENST00000623915 ZNF541Q9H0D2 1346 aa23.79■■□□□ 1.4
PCDHB5-202ENST00000623915 ERVV-1B6SEH8 477 aa23.78■■□□□ 1.4
PCDHB5-202ENST00000623915 CRY2Q49AN0 593 aa23.78■■□□□ 1.4
PCDHB5-202ENST00000623915 DUSP27Q5VZP5 1158 aa23.78■■□□□ 1.4
PCDHB5-202ENST00000623915 TTLL7Q6ZT98 887 aa23.78■■□□□ 1.4
PCDHB5-202ENST00000623915 ZNF277Q9NRM2 450 aaPredicted RBP23.78■■□□□ 1.4
PCDHB5-202ENST00000623915 MAP3K15Q6ZN16 1313 aa23.78■■□□□ 1.4
PCDHB5-202ENST00000623915 RIC1Q4ADV7 1423 aa23.77■■□□□ 1.4
PCDHB5-202ENST00000623915 DDX21Q9NR30 783 aaKnown RBP eCLIP23.77■■□□□ 1.4
PCDHB5-202ENST00000623915 UBN2Q6ZU65 1347 aa23.77■■□□□ 1.4
PCDHB5-202ENST00000623915 ADAMTSL1Q8N6G6 1762 aa23.76■■□□□ 1.39
PCDHB5-202ENST00000623915 NUTM1Q86Y26 1132 aa23.76■■□□□ 1.39
PCDHB5-202ENST00000623915 IBTKQ9P2D0 1353 aaPredicted RBP23.76■■□□□ 1.39
PCDHB5-202ENST00000623915 KRT24Q2M2I5 525 aa23.75■■□□□ 1.39
PCDHB5-202ENST00000623915 RTKN2Q8IZC4 609 aa23.75■■□□□ 1.39
PCDHB5-202ENST00000623915 TAF1DQ9H5J8 278 aaPredicted RBP23.75■■□□□ 1.39
PCDHB5-202ENST00000623915 COL4A5P29400 1685 aa23.74■■□□□ 1.39
PCDHB5-202ENST00000623915 IQCA1LA6NCM1 817 aa23.74■■□□□ 1.39
PCDHB5-202ENST00000623915 DBF4Q9UBU7 674 aaPredicted RBP23.74■■□□□ 1.39
PCDHB5-202ENST00000623915 HSPA1AP0DMV8 641 aaKnown RBP23.73■■□□□ 1.39
PCDHB5-202ENST00000623915 HSPA1BP0DMV9 641 aaKnown RBP23.73■■□□□ 1.39
PCDHB5-202ENST00000623915 MYL6BP14649 208 aa23.73■■□□□ 1.39
PCDHB5-202ENST00000623915 ALDH1B1P30837 517 aa23.73■■□□□ 1.39
PCDHB5-202ENST00000623915 NYXQ9GZU5 481 aa23.73■■□□□ 1.39
PCDHB5-202ENST00000623915 CREBZFQ9NS37 354 aa23.73■■□□□ 1.39
PCDHB5-202ENST00000623915 PASKQ96RG2 1323 aa23.73■■□□□ 1.39
PCDHB5-202ENST00000623915 FANCIQ9NVI1 1328 aa23.73■■□□□ 1.39
PCDHB5-202ENST00000623915 GTF2E1P29083 439 aaPredicted RBP23.72■■□□□ 1.39
PCDHB5-202ENST00000623915 HDGFL1Q5TGJ6 251 aa23.72■■□□□ 1.39
PCDHB5-202ENST00000623915 KIF6Q6ZMV9 814 aa23.72■■□□□ 1.39
PCDHB5-202ENST00000623915 LDHDQ86WU2 507 aa23.72■■□□□ 1.39
PCDHB5-202ENST00000623915 C8orf58Q8NAV2 365 aa23.72■■□□□ 1.39
PCDHB5-202ENST00000623915 ZBTB3Q9H5J0 574 aa23.72■■□□□ 1.39
PCDHB5-202ENST00000623915 MYH16Q9H6N6 1097 aa23.72■■□□□ 1.39
PCDHB5-202ENST00000623915 ANKRD36CQ5JPF3 1778 aa23.71■■□□□ 1.39
PCDHB5-202ENST00000623915 FZD9O00144 591 aa23.71■■□□□ 1.39
PCDHB5-202ENST00000623915 EIF2S2P20042 333 aaKnown RBP23.71■■□□□ 1.39
PCDHB5-202ENST00000623915 GPTP24298 496 aa23.71■■□□□ 1.39
PCDHB5-202ENST00000623915 IARSP41252 1262 aaKnown RBP23.71■■□□□ 1.39
PCDHB5-202ENST00000623915 SLC51AQ86UW1 340 aa23.71■■□□□ 1.39
PCDHB5-202ENST00000623915 SYNE4Q8N205 404 aa23.71■■□□□ 1.39
PCDHB5-202ENST00000623915 HOXA10P31260 410 aaPredicted RBP23.7■■□□□ 1.38
PCDHB5-202ENST00000623915 SUSD4Q5VX71 490 aa23.7■■□□□ 1.38
PCDHB5-202ENST00000623915 ZNF34Q8IZ26 560 aa23.7■■□□□ 1.38
PCDHB5-202ENST00000623915 TSR2Q969E8 191 aaKnown RBP23.7■■□□□ 1.38
PCDHB5-202ENST00000623915 PSMD1Q99460 953 aa23.7■■□□□ 1.38
PCDHB5-202ENST00000623915 HYPKQ9NX55 129 aa23.7■■□□□ 1.38
PCDHB5-202ENST00000623915 NTSR2O95665 410 aa23.69■■□□□ 1.38
PCDHB5-202ENST00000623915 GOLGA2Q08379 1002 aa23.69■■□□□ 1.38
PCDHB5-202ENST00000623915 SPINK5Q9NQ38 1064 aaPredicted RBP23.69■■□□□ 1.38
PCDHB5-202ENST00000623915 PROSER3Q2NL68 480 aa23.68■■□□□ 1.38
PCDHB5-202ENST00000623915 GIGYF2Q6Y7W6 1299 aaKnown RBP23.68■■□□□ 1.38
PCDHB5-202ENST00000623915 C3orf67Q6ZVT6 689 aa23.68■■□□□ 1.38
PCDHB5-202ENST00000623915 CHPF2Q9P2E5 772 aa23.68■■□□□ 1.38
PCDHB5-202ENST00000623915 MKRN1Q9UHC7 482 aaKnown RBP23.68■■□□□ 1.38
PCDHB5-202ENST00000623915 RNF123Q5XPI4 1314 aa23.67■■□□□ 1.38
PCDHB5-202ENST00000623915 E9PSI1 815 aa23.67■■□□□ 1.38
PCDHB5-202ENST00000623915 ITGBL1O95965 494 aaPredicted RBP23.67■■□□□ 1.38
PCDHB5-202ENST00000623915 CCDC30Q5VVM6 783 aa23.67■■□□□ 1.38
PCDHB5-202ENST00000623915 TRMT2AQ8IZ69 625 aaKnown RBP23.67■■□□□ 1.38
PCDHB5-202ENST00000623915 TSPYL6Q8N831 410 aa23.67■■□□□ 1.38
PCDHB5-202ENST00000623915 HACL1Q9UJ83 578 aa23.67■■□□□ 1.38
PCDHB5-202ENST00000623915 LTBP1Q14766 1721 aa23.67■■□□□ 1.38
PCDHB5-202ENST00000623915 CNTNAP1P78357 1384 aa23.66■■□□□ 1.38
PCDHB5-202ENST00000623915 TWISTNBQ3B726 338 aaPredicted RBP23.66■■□□□ 1.38
PCDHB5-202ENST00000623915 EPHX2P34913 555 aa23.65■■□□□ 1.38
PCDHB5-202ENST00000623915 CC2D2BQ6DHV5 1058 aa23.65■■□□□ 1.38
PCDHB5-202ENST00000623915 GPC2Q8N158 579 aa23.65■■□□□ 1.38
PCDHB5-202ENST00000623915 RPGRQ92834 1020 aaKnown RBP23.65■■□□□ 1.38
PCDHB5-202ENST00000623915 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
PCDHB5-202ENST00000623915 VAMP4O75379 141 aa23.64■■□□□ 1.37
PCDHB5-202ENST00000623915 SLFN5Q08AF3 891 aa23.64■■□□□ 1.37
PCDHB5-202ENST00000623915 EAPPQ56P03 285 aaPredicted RBP23.64■■□□□ 1.37
PCDHB5-202ENST00000623915 TNS4Q8IZW8 715 aa23.64■■□□□ 1.37
PCDHB5-202ENST00000623915 CRAMP1Q96RY5 1269 aa23.64■■□□□ 1.37
PCDHB5-202ENST00000623915 COPS6Q7L5N1 327 aa23.63■■□□□ 1.37
PCDHB5-202ENST00000623915 ANXA1P04083 346 aa23.62■■□□□ 1.37
PCDHB5-202ENST00000623915 PARP10Q53GL7 1025 aa23.62■■□□□ 1.37
PCDHB5-202ENST00000623915 HSP90AB3PQ58FF7 597 aa23.62■■□□□ 1.37
PCDHB5-202ENST00000623915 PLBD2Q8NHP8 589 aa23.62■■□□□ 1.37
PCDHB5-202ENST00000623915 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
PCDHB5-202ENST00000623915 LAMB2P55268 1798 aa23.61■■□□□ 1.37
PCDHB5-202ENST00000623915 PPEF1O14829 653 aaPredicted RBP23.61■■□□□ 1.37
PCDHB5-202ENST00000623915 JDP2Q8WYK2 163 aa23.61■■□□□ 1.37
PCDHB5-202ENST00000623915 ZNF428Q96B54 188 aa23.61■■□□□ 1.37
PCDHB5-202ENST00000623915 RBM17Q96I25 401 aaKnown RBP23.61■■□□□ 1.37
PCDHB5-202ENST00000623915 ELL2O00472 640 aaPredicted RBP23.6■■□□□ 1.37
PCDHB5-202ENST00000623915 EXOSC9Q06265 439 aaKnown RBP23.6■■□□□ 1.37
PCDHB5-202ENST00000623915 PPP1R42Q7Z4L9 355 aa23.6■■□□□ 1.37
PCDHB5-202ENST00000623915 PNMA8AQ86V59 439 aaPredicted RBP23.6■■□□□ 1.37
PCDHB5-202ENST00000623915 NECTIN2Q92692 538 aa23.6■■□□□ 1.37
PCDHB5-202ENST00000623915 TMEM88BA6NKF7 163 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms