RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 NGLY1Q96IV0 654 aa10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 TSG101Q99816 390 aa10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 ATP2B2Q01814 1243 aa10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 LDHAL6AQ6ZMR3 332 aa10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 ZNF397Q8NF99 534 aaPredicted RBP10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 CRNKL1Q9BZJ0 848 aaKnown RBP10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 ABCF2Q9UG63 623 aa10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 PRDM15P57071 1507 aaPredicted RBP10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 PDE1AP54750 535 aa10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 EPB41L2O43491 1005 aaKnown RBP10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 CUL5Q93034 780 aa10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 SPATA31E1Q6ZUB1 1445 aa10.33□□□□□ -0.76
AP000542.3-201ENST00000623391 PPP1R12BO60237 982 aaPredicted RBP10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 GTPBP4Q9BZE4 634 aaKnown RBP10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 AATKQ6ZMQ8 1374 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 UNC13BO14795 1591 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 ZNF76P36508 570 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 ZSCAN29Q8IWY8 852 aaPredicted RBP10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 ESYT1Q9BSJ8 1104 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 C8orf58Q8NAV2 365 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 XAGE3Q8WTP9 111 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 LRRC59Q96AG4 307 aaKnown RBP10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 MCM5P33992 734 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 CRACR2BQ8N4Y2 399 aaPredicted RBP10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 ZBTB3Q9H5J0 574 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 RBM27Q9P2N5 1060 aaKnown RBP10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 CROCC2H7BZ55 1655 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 ERLIN1O75477 346 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 UBE3BQ7Z3V4 1068 aa10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 UTP14AQ9BVJ6 771 aaKnown RBP10.32□□□□□ -0.76
AP000542.3-201ENST00000623391 IFIT3O14879 490 aaKnown RBP10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 MCMDC2Q4G0Z9 681 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 GCP02774 474 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 NOM1Q5C9Z4 860 aaKnown RBP10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 ZBTB40Q9NUA8 1239 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 STX6O43752 255 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 CEP85Q6P2H3 762 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 MFSD6Q6ZSS7 791 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 ANKRD18AQ8IVF6 992 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 SMC5Q8IY18 1101 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 EYA1Q99502 592 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 GOLIM4O00461 696 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 AMPD3Q01432 767 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 ZSCAN12O43309 604 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 BAG4O95429 457 aaKnown RBP10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 HLA-DOAP06340 250 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 DEF6Q9H4E7 631 aa10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 CWC15Q9P013 229 aaKnown RBP10.31□□□□□ -0.76
AP000542.3-201ENST00000623391 CALM1P0DP23 149 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 CALM2P0DP24 149 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 CALM3P0DP25 149 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 DESP17661 470 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 ANKRD2Q9GZV1 360 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 RTL9Q8NET4 1388 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 SDSP20132 328 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 GJB2P29033 226 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 RFC4P35249 363 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 GNAQP50148 359 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 ZNF771Q7L3S4 317 aaPredicted RBP10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 MEIS3Q99687 375 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 MAP3K19Q56UN5 1328 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 ADAMTS2O95450 1211 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 UBE2HP62256 183 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 STX1AQ16623 288 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 KDM4AO75164 1064 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 TRIM21P19474 475 aaKnown RBP10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 GSDMDP57764 484 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 TNPO1Q92973 898 aaKnown RBP10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 MINDY4BA8MYZ0 360 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 CCDC112Q8NEF3 446 aa10.3□□□□□ -0.76
AP000542.3-201ENST00000623391 IARSP41252 1262 aaKnown RBP10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 ATP2B3Q16720 1220 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 TMEM67Q5HYA8 995 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 FKBP15Q5T1M5 1219 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 COPS6Q7L5N1 327 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 FAM114A1Q8IWE2 563 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 ARHGAP31Q2M1Z3 1444 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 CERS3Q8IU89 383 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 DDX21Q9NR30 783 aaKnown RBP eCLIP10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 METAP2P50579 478 aaKnown RBP eCLIP10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 DDX11Q96FC9 970 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 KAT14Q9H8E8 782 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 ZNF804AQ7Z570 1209 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 HELLSQ9NRZ9 838 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 ERVK-7P63135 1459 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 CCDC194A0A1B0GVG4 234 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 MPHOSPH10O00566 681 aaKnown RBP10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 DDB1Q16531 1140 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 KLHL40Q2TBA0 621 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 TANGO6Q9C0B7 1094 aa10.29□□□□□ -0.76
AP000542.3-201ENST00000623391 PLCG2P16885 1265 aa10.28□□□□□ -0.76
AP000542.3-201ENST00000623391 PARP10Q53GL7 1025 aa10.28□□□□□ -0.76
AP000542.3-201ENST00000623391 ATL3Q6DD88 541 aa10.28□□□□□ -0.76
AP000542.3-201ENST00000623391 ZSCAN30Q86W11 494 aa10.28□□□□□ -0.76
AP000542.3-201ENST00000623391 PDCL2Q8N4E4 241 aa10.28□□□□□ -0.76
AP000542.3-201ENST00000623391 CCDC148Q8NFR7 591 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms