RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 EIF6P56537 245 aaKnown RBP21.41■■□□□ 1.02
CD99-211ENST00000623253 CNTROBQ8N137 903 aa21.41■■□□□ 1.02
CD99-211ENST00000623253 PSMD1Q99460 953 aa21.41■■□□□ 1.02
CD99-211ENST00000623253 CC2D2BQ6DHV5 1058 aa21.4■■□□□ 1.02
CD99-211ENST00000623253 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
CD99-211ENST00000623253 SUSD4Q5VX71 490 aa21.39■■□□□ 1.01
CD99-211ENST00000623253 RBM17Q96I25 401 aaKnown RBP21.39■■□□□ 1.01
CD99-211ENST00000623253 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
CD99-211ENST00000623253 UBN2Q6ZU65 1347 aa21.38■■□□□ 1.01
CD99-211ENST00000623253 MAPK8IP3Q9UPT6 1336 aa21.38■■□□□ 1.01
CD99-211ENST00000623253 LMOD1P29536 600 aaPredicted RBP21.38■■□□□ 1.01
CD99-211ENST00000623253 LARGE2Q8N3Y3 721 aa21.38■■□□□ 1.01
CD99-211ENST00000623253 HOXA10P31260 410 aaPredicted RBP21.37■■□□□ 1.01
CD99-211ENST00000623253 CTCFP49711 727 aaPredicted RBP21.37■■□□□ 1.01
CD99-211ENST00000623253 PLEKHF1Q96S99 279 aa21.37■■□□□ 1.01
CD99-211ENST00000623253 ABT1Q9ULW3 272 aaKnown RBP21.37■■□□□ 1.01
CD99-211ENST00000623253 PPEF1O14829 653 aaPredicted RBP21.36■■□□□ 1.01
CD99-211ENST00000623253 DEFB115Q30KQ5 88 aa21.36■■□□□ 1.01
CD99-211ENST00000623253 GRIPAP1Q4V328 841 aa21.35■■□□□ 1.01
CD99-211ENST00000623253 SLC51AQ86UW1 340 aa21.35■■□□□ 1.01
CD99-211ENST00000623253 ZNF34Q8IZ26 560 aa21.35■■□□□ 1.01
CD99-211ENST00000623253 TMX4Q9H1E5 349 aaPredicted RBP21.35■■□□□ 1.01
CD99-211ENST00000623253 PNNQ9H307 717 aaKnown RBP21.35■■□□□ 1.01
CD99-211ENST00000623253 KDM3BQ7LBC6 1761 aa21.34■■□□□ 1.01
CD99-211ENST00000623253 GIGYF2Q6Y7W6 1299 aaKnown RBP21.34■■□□□ 1.01
CD99-211ENST00000623253 C3orf67Q6ZVT6 689 aa21.34■■□□□ 1.01
CD99-211ENST00000623253 PPP1R42Q7Z4L9 355 aa21.34■■□□□ 1.01
CD99-211ENST00000623253 CRAMP1Q96RY5 1269 aa21.34■■□□□ 1.01
CD99-211ENST00000623253 PRDM10Q9NQV6 1147 aa21.34■■□□□ 1.01
CD99-211ENST00000623253 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
CD99-211ENST00000623253 SNED1Q8TER0 1413 aa21.34■■□□□ 1.01
CD99-211ENST00000623253 NUP98P52948 1817 aa21.34■■□□□ 1.01
CD99-211ENST00000623253 NTSR2O95665 410 aa21.33■■□□□ 1.01
CD99-211ENST00000623253 EIF2S2P20042 333 aaKnown RBP21.33■■□□□ 1.01
CD99-211ENST00000623253 EPS15P42566 896 aa21.33■■□□□ 1.01
CD99-211ENST00000623253 NIM1KQ8IY84 436 aa21.33■■□□□ 1.01
CD99-211ENST00000623253 NLRP3Q96P20 1036 aa21.33■■□□□ 1.01
CD99-211ENST00000623253 IBTKQ9P2D0 1353 aaPredicted RBP21.33■■□□□ 1
CD99-211ENST00000623253 COL4A5P29400 1685 aa21.32■■□□□ 1
CD99-211ENST00000623253 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
CD99-211ENST00000623253 RASSF10A6NK89 507 aa21.32■■□□□ 1
CD99-211ENST00000623253 LBX1P52954 281 aa21.32■■□□□ 1
CD99-211ENST00000623253 PAXIP1Q6ZW49 1069 aaPredicted RBP21.32■■□□□ 1
CD99-211ENST00000623253 DDX21Q9NR30 783 aaKnown RBP eCLIP21.32■■□□□ 1
CD99-211ENST00000623253 WBP1LQ9NX94 342 aa21.32■■□□□ 1
CD99-211ENST00000623253 ADAMTSL1Q8N6G6 1762 aa21.32■■□□□ 1
CD99-211ENST00000623253 ERBB4Q15303 1308 aa21.31■■□□□ 1
CD99-211ENST00000623253 WDR33Q9C0J8 1336 aaKnown RBP21.31■■□□□ 1
CD99-211ENST00000623253 RIC1Q4ADV7 1423 aa21.31■■□□□ 1
CD99-211ENST00000623253 PPIP5K2O43314 1243 aa21.31■■□□□ 1
CD99-211ENST00000623253 SCNN1DP51172 638 aa21.31■■□□□ 1
CD99-211ENST00000623253 PARP10Q53GL7 1025 aa21.31■■□□□ 1
CD99-211ENST00000623253 FMR1Q06787 632 aaKnown RBP eCLIP21.3■■□□□ 1
CD99-211ENST00000623253 GRM1Q13255 1194 aa21.3■■□□□ 1
CD99-211ENST00000623253 UTP14AQ9BVJ6 771 aaKnown RBP21.3■■□□□ 1
CD99-211ENST00000623253 ANXA1P04083 346 aa21.29■■□□□ 1
CD99-211ENST00000623253 AOC3Q16853 763 aa21.29■■□□□ 1
CD99-211ENST00000623253 RIPK4P57078 832 aa21.28■■□□□ 1
CD99-211ENST00000623253 MAP2K1Q02750 393 aaPredicted RBP21.28■■□□□ 1
CD99-211ENST00000623253 USP50Q70EL3 339 aaPredicted RBP21.28■■□□□ 1
CD99-211ENST00000623253 NECTIN2Q92692 538 aa21.28■■□□□ 1
CD99-211ENST00000623253 ATP6V0A2Q9Y487 856 aa21.28■■□□□ 1
CD99-211ENST00000623253 AIMP1Q12904 312 aaKnown RBP21.27■■□□□ 1
CD99-211ENST00000623253 PDIA6Q15084 440 aa21.27■■□□□ 1
CD99-211ENST00000623253 PROSER3Q2NL68 480 aa21.27■■□□□ 1
CD99-211ENST00000623253 LTBP1Q14766 1721 aa21.26■□□□□ 0.99
CD99-211ENST00000623253 TRAF5O00463 557 aa21.26■□□□□ 0.99
CD99-211ENST00000623253 SLC10A5Q5PT55 438 aa21.26■□□□□ 0.99
CD99-211ENST00000623253 ABCC4O15439 1325 aa21.26■□□□□ 0.99
CD99-211ENST00000623253 HSPA8P11142 646 aaKnown RBP21.25■□□□□ 0.99
CD99-211ENST00000623253 DPP8Q6V1X1 898 aaPredicted RBP21.25■□□□□ 0.99
CD99-211ENST00000623253 LRP10Q7Z4F1 713 aa21.25■□□□□ 0.99
CD99-211ENST00000623253 SUPT20HQ8NEM7 779 aa21.25■□□□□ 0.99
CD99-211ENST00000623253 CAPNS2Q96L46 248 aa21.25■□□□□ 0.99
CD99-211ENST00000623253 ZNRF3Q9ULT6 936 aa21.25■□□□□ 0.99
CD99-211ENST00000623253 HCLS1P14317 486 aaPredicted RBP21.24■□□□□ 0.99
CD99-211ENST00000623253 ECE1P42892 770 aa21.24■□□□□ 0.99
CD99-211ENST00000623253 CXCL9Q07325 125 aa21.24■□□□□ 0.99
CD99-211ENST00000623253 COPS6Q7L5N1 327 aa21.24■□□□□ 0.99
CD99-211ENST00000623253 BEGAINQ9BUH8 593 aa21.24■□□□□ 0.99
CD99-211ENST00000623253 VPS33BQ9H267 617 aa21.24■□□□□ 0.99
CD99-211ENST00000623253 GPRC5DQ9NZD1 345 aa21.24■□□□□ 0.99
CD99-211ENST00000623253 BBOX1O75936 387 aa21.23■□□□□ 0.99
CD99-211ENST00000623253 CST9Q5W186 159 aa21.23■□□□□ 0.99
CD99-211ENST00000623253 CYP4F22Q6NT55 531 aa21.23■□□□□ 0.99
CD99-211ENST00000623253 MPNDQ8N594 471 aa21.23■□□□□ 0.99
CD99-211ENST00000623253 XAGE3Q8WTP9 111 aa21.23■□□□□ 0.99
CD99-211ENST00000623253 ZNF428Q96B54 188 aa21.23■□□□□ 0.99
CD99-211ENST00000623253 ADARB2Q9NS39 739 aaKnown RBP21.23■□□□□ 0.99
CD99-211ENST00000623253 GMPSP49915 693 aaPredicted RBP21.22■□□□□ 0.99
CD99-211ENST00000623253 HSP90AB3PQ58FF7 597 aa21.22■□□□□ 0.99
CD99-211ENST00000623253 DDX46Q7L014 1031 aaKnown RBP21.22■□□□□ 0.99
CD99-211ENST00000623253 NLRP10Q86W26 655 aa21.22■□□□□ 0.99
CD99-211ENST00000623253 SP8Q8IXZ3 490 aa21.22■□□□□ 0.99
CD99-211ENST00000623253 GPR101Q96P66 508 aaPredicted RBP21.22■□□□□ 0.99
CD99-211ENST00000623253 BCL2L13Q9BXK5 485 aa21.22■□□□□ 0.99
CD99-211ENST00000623253 TRMT112Q9UI30 125 aaKnown RBP21.22■□□□□ 0.99
CD99-211ENST00000623253 LMOD3Q0VAK6 560 aa21.21■□□□□ 0.99
CD99-211ENST00000623253 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
CD99-211ENST00000623253 BABAM1Q9NWV8 329 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms