RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 DNM1Q05193 864 aaKnown RBP6.65□□□□□ -1.34
ATRX-209ENST00000623242 HIF1AQ16665 826 aa6.65□□□□□ -1.34
ATRX-209ENST00000623242 SAMD5Q5TGI4 173 aa6.65□□□□□ -1.34
ATRX-209ENST00000623242 NLRP8Q86W28 1048 aa6.65□□□□□ -1.34
ATRX-209ENST00000623242 NPAS4Q8IUM7 802 aa6.65□□□□□ -1.34
ATRX-209ENST00000623242 ASB16Q96NS5 453 aa6.65□□□□□ -1.34
ATRX-209ENST00000623242 RBCK1Q9BYM8 510 aa6.65□□□□□ -1.34
ATRX-209ENST00000623242 ZCCHC2Q9C0B9 1178 aaKnown RBP6.65□□□□□ -1.34
ATRX-209ENST00000623242 ANKIB1Q9P2G1 1089 aa6.65□□□□□ -1.34
ATRX-209ENST00000623242 STK17AQ9UEE5 414 aa6.65□□□□□ -1.34
ATRX-209ENST00000623242 ANKRD33BA6NCL7 494 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 ITGA6P23229 1130 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 AAMPQ13685 434 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 TMC7Q7Z402 723 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 GJD3Q8N144 294 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 PGBD3Q8N328 593 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 NUDT16Q96DE0 195 aaKnown RBP6.64□□□□□ -1.35
ATRX-209ENST00000623242 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 GGNBP2Q9H3C7 697 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 BRPF3Q9ULD4 1205 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 MROH2BQ7Z745 1585 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 SMARCA4P51532 1647 aa6.64□□□□□ -1.35
ATRX-209ENST00000623242 A6NHS1 94 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 NDUFB5O43674 189 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 GMPRP36959 345 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 ARSDP51689 593 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 TRIP4Q15650 581 aaPredicted RBP6.63□□□□□ -1.35
ATRX-209ENST00000623242 TRIM22Q8IYM9 498 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 RGL4Q8IZJ4 473 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 ZNF837Q96EG3 531 aaPredicted RBP6.63□□□□□ -1.35
ATRX-209ENST00000623242 CEP63Q96MT8 703 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 RSF1Q96T23 1441 aaPredicted RBP6.63□□□□□ -1.35
ATRX-209ENST00000623242 NUCKS1Q9H1E3 243 aaKnown RBP6.63□□□□□ -1.35
ATRX-209ENST00000623242 NEUROD4Q9HD90 331 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 STRN4Q9NRL3 753 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 NDFIP2Q9NV92 336 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 KCNMB2Q9Y691 235 aa6.63□□□□□ -1.35
ATRX-209ENST00000623242 GPR182O15218 404 aa6.62□□□□□ -1.35
ATRX-209ENST00000623242 EFSO43281 561 aa6.62□□□□□ -1.35
ATRX-209ENST00000623242 PPFIA3O75145 1194 aa6.62□□□□□ -1.35
ATRX-209ENST00000623242 VSIG8P0DPA2 414 aa6.62□□□□□ -1.35
ATRX-209ENST00000623242 LBRQ14739 615 aaKnown RBP6.62□□□□□ -1.35
ATRX-209ENST00000623242 GRIN2CQ14957 1233 aa6.62□□□□□ -1.35
ATRX-209ENST00000623242 EFHC2Q5JST6 749 aa6.62□□□□□ -1.35
ATRX-209ENST00000623242 ZNF428Q96B54 188 aa6.62□□□□□ -1.35
ATRX-209ENST00000623242 RTCBQ9Y3I0 505 aaKnown RBP6.62□□□□□ -1.35
ATRX-209ENST00000623242 GJA3Q9Y6H8 435 aa6.62□□□□□ -1.35
ATRX-209ENST00000623242 CC2D2AQ9P2K1 1620 aa6.61□□□□□ -1.35
ATRX-209ENST00000623242 ERBB4Q15303 1308 aa6.61□□□□□ -1.35
ATRX-209ENST00000623242 ATXN7O15265 892 aaPredicted RBP6.61□□□□□ -1.35
ATRX-209ENST00000623242 BNIP3LO60238 219 aa6.61□□□□□ -1.35
ATRX-209ENST00000623242 FAM157BP0CG42 384 aa6.61□□□□□ -1.35
ATRX-209ENST00000623242 TNP2Q05952 138 aa6.61□□□□□ -1.35
ATRX-209ENST00000623242 SFSWAPQ12872 951 aaKnown RBP6.61□□□□□ -1.35
ATRX-209ENST00000623242 DSC3Q14574 896 aa6.61□□□□□ -1.35
ATRX-209ENST00000623242 CITED4Q96RK1 184 aa6.61□□□□□ -1.35
ATRX-209ENST00000623242 BRD7Q9NPI1 651 aa6.61□□□□□ -1.35
ATRX-209ENST00000623242 PCDHGC4Q9Y5F7 938 aa6.61□□□□□ -1.35
ATRX-209ENST00000623242 DCDC2BA2VCK2 349 aa6.6□□□□□ -1.35
ATRX-209ENST00000623242 TREHO43280 583 aa6.6□□□□□ -1.35
ATRX-209ENST00000623242 ZSCAN29Q8IWY8 852 aaPredicted RBP6.6□□□□□ -1.35
ATRX-209ENST00000623242 CMTR1Q8N1G2 835 aaKnown RBP6.6□□□□□ -1.35
ATRX-209ENST00000623242 PIK3R5Q8WYR1 880 aa6.6□□□□□ -1.35
ATRX-209ENST00000623242 GTPBP3Q969Y2 492 aaKnown RBP6.6□□□□□ -1.35
ATRX-209ENST00000623242 SMARCA2P51531 1590 aa6.6□□□□□ -1.35
ATRX-209ENST00000623242 BAZ1BQ9UIG0 1483 aaKnown RBP6.6□□□□□ -1.35
ATRX-209ENST00000623242 H7C1W4 665 aa6.59□□□□□ -1.35
ATRX-209ENST00000623242 KHNYNO15037 678 aaKnown RBP6.59□□□□□ -1.35
ATRX-209ENST00000623242 MAPTP10636 758 aaKnown RBP6.59□□□□□ -1.35
ATRX-209ENST00000623242 ERCC3P19447 782 aa6.59□□□□□ -1.35
ATRX-209ENST00000623242 KCNQ4P56696 695 aa6.59□□□□□ -1.35
ATRX-209ENST00000623242 TAGLNQ01995 201 aaKnown RBP6.59□□□□□ -1.35
ATRX-209ENST00000623242 FMR1Q06787 632 aaKnown RBP eCLIP6.59□□□□□ -1.35
ATRX-209ENST00000623242 FIGNL1Q6PIW4 674 aa6.59□□□□□ -1.35
ATRX-209ENST00000623242 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.35
ATRX-209ENST00000623242 ABHD17AQ96GS6 310 aa6.59□□□□□ -1.35
ATRX-209ENST00000623242 FAM13BQ9NYF5 915 aa6.59□□□□□ -1.35
ATRX-209ENST00000623242 ATAD2BQ9ULI0 1458 aa6.59□□□□□ -1.36
ATRX-209ENST00000623242 P4HBP07237 508 aaKnown RBP6.58□□□□□ -1.36
ATRX-209ENST00000623242 C8orf34Q49A92 452 aa6.58□□□□□ -1.36
ATRX-209ENST00000623242 VWA5B2Q8N398 1253 aa6.58□□□□□ -1.36
ATRX-209ENST00000623242 TMC1Q8TDI8 760 aa6.58□□□□□ -1.36
ATRX-209ENST00000623242 NIF3L1Q9GZT8 377 aa6.58□□□□□ -1.36
ATRX-209ENST00000623242 FAM181BA6NEQ2 426 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 UBAP1LF5GYI3 381 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 GPR25O00155 361 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 EGFRP00533 1210 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 USP5P45974 858 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 EHHADHQ08426 723 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 PDE3BQ13370 1112 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 ZSCAN1Q8NBB4 408 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 NANOS1Q8WY41 292 aaKnown RBP6.57□□□□□ -1.36
ATRX-209ENST00000623242 ALKBH8Q96BT7 664 aaKnown RBP6.57□□□□□ -1.36
ATRX-209ENST00000623242 GMCL1Q96IK5 515 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 DMRTB1Q96MA1 342 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 SETDB2Q96T68 719 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 KCNH4Q9UQ05 1017 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 AMOTL2Q9Y2J4 779 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 WIZO95785 1651 aa6.57□□□□□ -1.36
ATRX-209ENST00000623242 RBM47A0AV96 593 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms