RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 PPP1R42Q7Z4L9 355 aa20.79■□□□□ 0.92
DDB2-216ENST00000622878 TAOK3Q9H2K8 898 aa20.79■□□□□ 0.92
DDB2-216ENST00000622878 DBF4Q9UBU7 674 aaPredicted RBP20.79■□□□□ 0.92
DDB2-216ENST00000622878 SNED1Q8TER0 1413 aa20.78■□□□□ 0.92
DDB2-216ENST00000622878 HSP90AB3PQ58FF7 597 aa20.78■□□□□ 0.92
DDB2-216ENST00000622878 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
DDB2-216ENST00000622878 MRS2Q9HD23 443 aa20.78■□□□□ 0.92
DDB2-216ENST00000622878 GLTPD2A6NH11 291 aa20.77■□□□□ 0.92
DDB2-216ENST00000622878 TCIRG1Q13488 830 aa20.77■□□□□ 0.92
DDB2-216ENST00000622878 NCBP3Q53F19 620 aaKnown RBP20.77■□□□□ 0.92
DDB2-216ENST00000622878 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
DDB2-216ENST00000622878 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
DDB2-216ENST00000622878 C3orf67Q6ZVT6 689 aa20.77■□□□□ 0.92
DDB2-216ENST00000622878 NLRP10Q86W26 655 aa20.77■□□□□ 0.92
DDB2-216ENST00000622878 UTP14AQ9BVJ6 771 aaKnown RBP20.77■□□□□ 0.92
DDB2-216ENST00000622878 RNF123Q5XPI4 1314 aa20.77■□□□□ 0.91
DDB2-216ENST00000622878 C8orf58Q8NAV2 365 aa20.76■□□□□ 0.91
DDB2-216ENST00000622878 PLBD2Q8NHP8 589 aa20.76■□□□□ 0.91
DDB2-216ENST00000622878 RRAGCQ9HB90 399 aa20.76■□□□□ 0.91
DDB2-216ENST00000622878 HYPKQ9NX55 129 aa20.76■□□□□ 0.91
DDB2-216ENST00000622878 HSPA6P17066 643 aa20.75■□□□□ 0.91
DDB2-216ENST00000622878 ANKRD13DQ6ZTN6 518 aa20.75■□□□□ 0.91
DDB2-216ENST00000622878 WWC1Q8IX03 1113 aa20.75■□□□□ 0.91
DDB2-216ENST00000622878 LAMB2P55268 1798 aa20.74■□□□□ 0.91
DDB2-216ENST00000622878 FKBP4Q02790 459 aaKnown RBP eCLIP20.74■□□□□ 0.91
DDB2-216ENST00000622878 CRAMP1Q96RY5 1269 aa20.74■□□□□ 0.91
DDB2-216ENST00000622878 WDR90Q96KV7 1748 aa20.73■□□□□ 0.91
DDB2-216ENST00000622878 ELL2O00472 640 aaPredicted RBP20.73■□□□□ 0.91
DDB2-216ENST00000622878 RTKN2Q8IZC4 609 aa20.73■□□□□ 0.91
DDB2-216ENST00000622878 RBM46Q8TBY0 533 aaKnown RBP20.73■□□□□ 0.91
DDB2-216ENST00000622878 RPGRQ92834 1020 aaKnown RBP20.73■□□□□ 0.91
DDB2-216ENST00000622878 ISCA1Q9BUE6 129 aa20.73■□□□□ 0.91
DDB2-216ENST00000622878 POTECB2RU33 542 aa20.72■□□□□ 0.91
DDB2-216ENST00000622878 SYNE4Q8N205 404 aa20.72■□□□□ 0.91
DDB2-216ENST00000622878 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
DDB2-216ENST00000622878 TSPYL6Q8N831 410 aa20.71■□□□□ 0.91
DDB2-216ENST00000622878 RBM17Q96I25 401 aaKnown RBP20.71■□□□□ 0.91
DDB2-216ENST00000622878 DDX60Q8IY21 1712 aaKnown RBP20.7■□□□□ 0.9
DDB2-216ENST00000622878 CC2D2BQ6DHV5 1058 aa20.7■□□□□ 0.9
DDB2-216ENST00000622878 TSR2Q969E8 191 aaKnown RBP20.7■□□□□ 0.9
DDB2-216ENST00000622878 PHAXQ9H814 394 aaKnown RBP20.7■□□□□ 0.9
DDB2-216ENST00000622878 ZNF277Q9NRM2 450 aaPredicted RBP20.7■□□□□ 0.9
DDB2-216ENST00000622878 TRMT112Q9UI30 125 aaKnown RBP20.7■□□□□ 0.9
DDB2-216ENST00000622878 IL16Q14005 1332 aa20.7■□□□□ 0.9
DDB2-216ENST00000622878 HCLS1P14317 486 aaPredicted RBP20.69■□□□□ 0.9
DDB2-216ENST00000622878 VEGFAP15692 232 aaPredicted RBP20.69■□□□□ 0.9
DDB2-216ENST00000622878 TRIM28Q13263 835 aaKnown RBP20.69■□□□□ 0.9
DDB2-216ENST00000622878 DPY19L2Q6NUT2 758 aa20.69■□□□□ 0.9
DDB2-216ENST00000622878 SLC51AQ86UW1 340 aa20.69■□□□□ 0.9
DDB2-216ENST00000622878 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
DDB2-216ENST00000622878 PSMD1Q99460 953 aa20.69■□□□□ 0.9
DDB2-216ENST00000622878 SH3TC1Q8TE82 1336 aa20.69■□□□□ 0.9
DDB2-216ENST00000622878 ATP5J2-PTCD1G3V325 749 aa20.67■□□□□ 0.9
DDB2-216ENST00000622878 FSTL1Q12841 308 aa20.67■□□□□ 0.9
DDB2-216ENST00000622878 ABCC4O15439 1325 aa20.67■□□□□ 0.9
DDB2-216ENST00000622878 PPEF1O14829 653 aaPredicted RBP20.66■□□□□ 0.9
DDB2-216ENST00000622878 DDNO94850 711 aaPredicted RBP20.66■□□□□ 0.9
DDB2-216ENST00000622878 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
DDB2-216ENST00000622878 GRIPAP1Q4V328 841 aa20.66■□□□□ 0.9
DDB2-216ENST00000622878 CCDC30Q5VVM6 783 aa20.66■□□□□ 0.9
DDB2-216ENST00000622878 CHMP4AQ9BY43 222 aa20.66■□□□□ 0.9
DDB2-216ENST00000622878 COL4A5P29400 1685 aa20.66■□□□□ 0.9
DDB2-216ENST00000622878 TAF1P21675 1872 aa20.65■□□□□ 0.9
DDB2-216ENST00000622878 ZNF428Q96B54 188 aa20.65■□□□□ 0.9
DDB2-216ENST00000622878 FAM89AQ96GI7 184 aa20.65■□□□□ 0.9
DDB2-216ENST00000622878 ATP6V0A2Q9Y487 856 aa20.65■□□□□ 0.9
DDB2-216ENST00000622878 GOLGA2Q08379 1002 aa20.64■□□□□ 0.89
DDB2-216ENST00000622878 RIC3Q7Z5B4 369 aa20.64■□□□□ 0.89
DDB2-216ENST00000622878 ZNF541Q9H0D2 1346 aa20.63■□□□□ 0.89
DDB2-216ENST00000622878 FZD9O00144 591 aa20.63■□□□□ 0.89
DDB2-216ENST00000622878 APLP1P51693 650 aa20.63■□□□□ 0.89
DDB2-216ENST00000622878 WDR63Q8IWG1 891 aa20.63■□□□□ 0.89
DDB2-216ENST00000622878 L3MBTL3Q96JM7 780 aaPredicted RBP20.63■□□□□ 0.89
DDB2-216ENST00000622878 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
DDB2-216ENST00000622878 BBOX1O75936 387 aa20.62■□□□□ 0.89
DDB2-216ENST00000622878 SF3B3Q15393 1217 aaKnown RBP20.62■□□□□ 0.89
DDB2-216ENST00000622878 TWISTNBQ3B726 338 aaPredicted RBP20.62■□□□□ 0.89
DDB2-216ENST00000622878 SMC1BQ8NDV3 1235 aa20.62■□□□□ 0.89
DDB2-216ENST00000622878 SCN4AP35499 1836 aa20.62■□□□□ 0.89
DDB2-216ENST00000622878 FANCIQ9NVI1 1328 aa20.61■□□□□ 0.89
DDB2-216ENST00000622878 DDX46Q7L014 1031 aaKnown RBP20.61■□□□□ 0.89
DDB2-216ENST00000622878 SP8Q8IXZ3 490 aa20.61■□□□□ 0.89
DDB2-216ENST00000622878 GRAPQ13588 217 aa20.6■□□□□ 0.89
DDB2-216ENST00000622878 FAM9BQ8IZU0 186 aa20.6■□□□□ 0.89
DDB2-216ENST00000622878 ZBTB38Q8NAP3 1195 aaPredicted RBP20.6■□□□□ 0.89
DDB2-216ENST00000622878 GRAPLQ8TC17 118 aaPredicted RBP20.6■□□□□ 0.89
DDB2-216ENST00000622878 MYD88Q99836 296 aa20.6■□□□□ 0.89
DDB2-216ENST00000622878 METTL22Q9BUU2 404 aaPredicted RBP20.6■□□□□ 0.89
DDB2-216ENST00000622878 RTFDC1Q9BY42 306 aaPredicted RBP20.6■□□□□ 0.89
DDB2-216ENST00000622878 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
DDB2-216ENST00000622878 LRRC37AA6NMS7 1700 aa20.6■□□□□ 0.89
DDB2-216ENST00000622878 PCNTO95613 3336 aa20.6■□□□□ 0.89
DDB2-216ENST00000622878 COL4A1P02462 1669 aa20.6■□□□□ 0.89
DDB2-216ENST00000622878 DNAJC5GQ8N7S2 189 aa20.59■□□□□ 0.89
DDB2-216ENST00000622878 CCDC191Q8NCU4 936 aa20.59■□□□□ 0.89
DDB2-216ENST00000622878 SPINK5Q9NQ38 1064 aaPredicted RBP20.59■□□□□ 0.89
DDB2-216ENST00000622878 CACNA1FO60840 1977 aa20.59■□□□□ 0.89
DDB2-216ENST00000622878 IRS4O14654 1257 aaPredicted RBP20.58■□□□□ 0.89
DDB2-216ENST00000622878 DDX58O95786 925 aaKnown RBP20.58■□□□□ 0.89
DDB2-216ENST00000622878 RTL5Q5HYW3 569 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms