RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 STRN4Q9NRL3 753 aa7.41□□□□□ -1.22
SRSF4-207ENST00000622143 NINLQ9Y2I6 1382 aa7.41□□□□□ -1.22
SRSF4-207ENST00000622143 MYOM1P52179 1685 aa7.41□□□□□ -1.22
SRSF4-207ENST00000622143 THSD7AQ9UPZ6 1657 aa7.41□□□□□ -1.22
SRSF4-207ENST00000622143 KIF1BO60333 1816 aa7.41□□□□□ -1.22
SRSF4-207ENST00000622143 GPR37L1O60883 481 aa7.4□□□□□ -1.22
SRSF4-207ENST00000622143 ABL2P42684 1182 aa7.4□□□□□ -1.22
SRSF4-207ENST00000622143 SAFB2Q14151 953 aaKnown RBP eCLIP7.4□□□□□ -1.22
SRSF4-207ENST00000622143 TMEM132EQ6IEE7 984 aa7.4□□□□□ -1.22
SRSF4-207ENST00000622143 PNMA1Q8ND90 353 aa7.4□□□□□ -1.22
SRSF4-207ENST00000622143 CDK15Q96Q40 435 aa7.4□□□□□ -1.22
SRSF4-207ENST00000622143 GMPR2Q9P2T1 348 aaKnown RBP7.4□□□□□ -1.22
SRSF4-207ENST00000622143 SPATA31A5Q5VU36 1347 aa7.39□□□□□ -1.23
SRSF4-207ENST00000622143 SPATA31A7Q8IWB4 1347 aa7.39□□□□□ -1.23
SRSF4-207ENST00000622143 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
SRSF4-207ENST00000622143 PSME1Q06323 249 aa7.39□□□□□ -1.23
SRSF4-207ENST00000622143 CHRNA2Q15822 529 aa7.39□□□□□ -1.23
SRSF4-207ENST00000622143 FAM174AQ8TBP5 190 aa7.39□□□□□ -1.23
SRSF4-207ENST00000622143 ZMYND15Q9H091 742 aa7.39□□□□□ -1.23
SRSF4-207ENST00000622143 ATP13A2Q9NQ11 1180 aa7.39□□□□□ -1.23
SRSF4-207ENST00000622143 COL14A1Q05707 1796 aaKnown RBP7.38□□□□□ -1.23
SRSF4-207ENST00000622143 IFT172Q9UG01 1749 aa7.38□□□□□ -1.23
SRSF4-207ENST00000622143 TECPR2O15040 1411 aa7.38□□□□□ -1.23
SRSF4-207ENST00000622143 FAM196AQ6ZSG2 479 aa7.38□□□□□ -1.23
SRSF4-207ENST00000622143 BPHLQ86WA6 291 aaPredicted RBP7.38□□□□□ -1.23
SRSF4-207ENST00000622143 PRM3Q9NNZ6 103 aa7.38□□□□□ -1.23
SRSF4-207ENST00000622143 ADGRF5Q8IZF2 1346 aa7.37□□□□□ -1.23
SRSF4-207ENST00000622143 MAGEB6P1A0A0J9YX57 407 aa7.37□□□□□ -1.23
SRSF4-207ENST00000622143 NFX1Q12986 1120 aaKnown RBP7.37□□□□□ -1.23
SRSF4-207ENST00000622143 GPKOWQ92917 476 aaPredicted RBP eCLIP7.37□□□□□ -1.233e-6■■□□□ 13.3
SRSF4-207ENST00000622143 KLF16Q9BXK1 252 aaPredicted RBP7.37□□□□□ -1.23
SRSF4-207ENST00000622143 CARD14Q9BXL6 1004 aa7.37□□□□□ -1.23
SRSF4-207ENST00000622143 FKBPLQ9UIM3 349 aa7.37□□□□□ -1.23
SRSF4-207ENST00000622143 WASF2Q9Y6W5 498 aa7.37□□□□□ -1.23
SRSF4-207ENST00000622143 PPLO60437 1756 aa7.37□□□□□ -1.23
SRSF4-207ENST00000622143 PRAG1Q86YV5 1406 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 ARHGEF10O15013 1369 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 A6NJR5 290 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 GIGYF1O75420 1035 aaPredicted RBP7.36□□□□□ -1.23
SRSF4-207ENST00000622143 ADH1CP00326 375 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 GRM5P41594 1212 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 NNTQ13423 1086 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 ARID5BQ14865 1188 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 TRMT44Q8IYL2 757 aaKnown RBP7.36□□□□□ -1.23
SRSF4-207ENST00000622143 OCSTAMPQ9BR26 566 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 KRTAP4-8Q9BYQ9 185 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 FHDC1Q9C0D6 1143 aaPredicted RBP7.36□□□□□ -1.23
SRSF4-207ENST00000622143 PRDM11Q9NQV5 511 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 NRXN1Q9ULB1 1477 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 CASZ1Q86V15 1759 aa7.36□□□□□ -1.23
SRSF4-207ENST00000622143 SBNO1A3KN83 1393 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 PARD3Q8TEW0 1356 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 SPATA31A1Q5TZJ5 1347 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 NR3C2P08235 984 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 PDE3BQ13370 1112 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 IRF5Q13568 498 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 RGL3Q3MIN7 710 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 NUTM2GQ5VZR2 741 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 PTF1AQ7RTS3 328 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 TRIM46Q7Z4K8 759 aa7.35□□□□□ -1.23
SRSF4-207ENST00000622143 PPARGC1BQ86YN6 1023 aaKnown RBP7.35□□□□□ -1.23
SRSF4-207ENST00000622143 TRPM3Q9HCF6 1732 aaPredicted RBP7.35□□□□□ -1.23
SRSF4-207ENST00000622143 ROCK1Q13464 1354 aa7.34□□□□□ -1.23
SRSF4-207ENST00000622143 ZC3H4Q9UPT8 1303 aaKnown RBP7.34□□□□□ -1.23
SRSF4-207ENST00000622143 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.34□□□□□ -1.23
SRSF4-207ENST00000622143 ZC3H6P61129 1189 aaKnown RBP7.34□□□□□ -1.23
SRSF4-207ENST00000622143 PDXDC2PQ6P474 469 aa7.34□□□□□ -1.23
SRSF4-207ENST00000622143 HOMEZQ8IX15 550 aa7.34□□□□□ -1.23
SRSF4-207ENST00000622143 HIRIP3Q9BW71 556 aaPredicted RBP7.34□□□□□ -1.23
SRSF4-207ENST00000622143 KIAA0232Q92628 1395 aa7.33□□□□□ -1.24
SRSF4-207ENST00000622143 KNDC1Q76NI1 1749 aa7.33□□□□□ -1.24
SRSF4-207ENST00000622143 CAPN5O15484 640 aaPredicted RBP7.33□□□□□ -1.24
SRSF4-207ENST00000622143 TIMP2P16035 220 aa7.33□□□□□ -1.24
SRSF4-207ENST00000622143 ERFEQ4G0M1 354 aa7.33□□□□□ -1.24
SRSF4-207ENST00000622143 ZBTB33Q86T24 672 aa7.33□□□□□ -1.24
SRSF4-207ENST00000622143 TRIM47Q96LD4 638 aa7.33□□□□□ -1.24
SRSF4-207ENST00000622143 ARHGAP9Q9BRR9 750 aa7.33□□□□□ -1.24
SRSF4-207ENST00000622143 SYT17Q9BSW7 474 aa7.33□□□□□ -1.24
SRSF4-207ENST00000622143 MAP4K5Q9Y4K4 846 aa7.33□□□□□ -1.24
SRSF4-207ENST00000622143 RRBP1Q9P2E9 1410 aaKnown RBP7.33□□□□□ -1.24
SRSF4-207ENST00000622143 CRYBG1Q9Y4K1 1723 aa7.32□□□□□ -1.24
SRSF4-207ENST00000622143 ALS2Q96Q42 1657 aa7.32□□□□□ -1.24
SRSF4-207ENST00000622143 ZBTB7CA1YPR0 619 aa7.32□□□□□ -1.24
SRSF4-207ENST00000622143 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
SRSF4-207ENST00000622143 TRAK2O60296 914 aa7.32□□□□□ -1.24
SRSF4-207ENST00000622143 BMP1P13497 986 aa7.32□□□□□ -1.24
SRSF4-207ENST00000622143 SNRPBP14678 240 aaKnown RBP7.32□□□□□ -1.24
SRSF4-207ENST00000622143 EVA1CP58658 441 aa7.32□□□□□ -1.24
SRSF4-207ENST00000622143 NR5A1Q13285 461 aa7.32□□□□□ -1.24
SRSF4-207ENST00000622143 GPR162Q16538 588 aa7.32□□□□□ -1.24
SRSF4-207ENST00000622143 LARP1Q6PKG0 1096 aaKnown RBP7.32□□□□□ -1.24
SRSF4-207ENST00000622143 WWC1Q8IX03 1113 aa7.32□□□□□ -1.24
SRSF4-207ENST00000622143 YTHDC2Q9H6S0 1430 aaKnown RBP7.32□□□□□ -1.24
SRSF4-207ENST00000622143 FBXO45P0C2W1 286 aa7.31□□□□□ -1.24
SRSF4-207ENST00000622143 VAC14Q08AM6 782 aa7.31□□□□□ -1.24
SRSF4-207ENST00000622143 PRAM1Q96QH2 718 aa7.31□□□□□ -1.24
SRSF4-207ENST00000622143 ZNF330Q9Y3S2 320 aaPredicted RBP7.31□□□□□ -1.24
SRSF4-207ENST00000622143 UTRNP46939 3433 aa7.31□□□□□ -1.24
SRSF4-207ENST00000622143 ABCC11Q96J66 1382 aa7.31□□□□□ -1.24
SRSF4-207ENST00000622143 CHD4Q14839 1912 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms