RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KCNH4Q9UQ05 1017 aa9.05□□□□□ -0.96
BRCA1-229ENST00000621897 RNF225M0QZC1 329 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-229ENST00000621897 GRNP28799 593 aaKnown RBP9.04□□□□□ -0.96
BRCA1-229ENST00000621897 RASSF7Q02833 373 aa9.04□□□□□ -0.96
BRCA1-229ENST00000621897 HIF1AQ16665 826 aa9.04□□□□□ -0.96
BRCA1-229ENST00000621897 CXXC1Q9P0U4 656 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-229ENST00000621897 CLP1Q92989 425 aaKnown RBP9.03□□□□□ -0.96
BRCA1-229ENST00000621897 BTBD6Q96KE9 485 aa9.03□□□□□ -0.96
BRCA1-229ENST00000621897 MDFIQ99750 246 aa9.03□□□□□ -0.96
BRCA1-229ENST00000621897 MKNK1Q9BUB5 465 aa9.03□□□□□ -0.96
BRCA1-229ENST00000621897 COX20Q5RI15 118 aa9.02□□□□□ -0.97
BRCA1-229ENST00000621897 SAP130Q9H0E3 1048 aa9.02□□□□□ -0.97
BRCA1-229ENST00000621897 RRAGCQ9HB90 399 aa9.02□□□□□ -0.97
BRCA1-229ENST00000621897 AMPD1P23109 780 aa9.01□□□□□ -0.97
BRCA1-229ENST00000621897 IDH3AP50213 366 aa9.01□□□□□ -0.97
BRCA1-229ENST00000621897 C11orf91Q3C1V1 193 aa9.01□□□□□ -0.97
BRCA1-229ENST00000621897 CHSY3Q70JA7 882 aa9.01□□□□□ -0.97
BRCA1-229ENST00000621897 GDF11O95390 407 aa9□□□□□ -0.97
BRCA1-229ENST00000621897 INPP5BP32019 993 aa9□□□□□ -0.97
BRCA1-229ENST00000621897 PODNQ7Z5L7 613 aa9□□□□□ -0.97
BRCA1-229ENST00000621897 BEND7Q8N7W2 519 aaPredicted RBP9□□□□□ -0.97
BRCA1-229ENST00000621897 TIMELESSQ9UNS1 1208 aa9□□□□□ -0.97
BRCA1-229ENST00000621897 SIN3BO75182 1162 aa8.99□□□□□ -0.97
BRCA1-229ENST00000621897 DGKGP49619 791 aa8.99□□□□□ -0.97
BRCA1-229ENST00000621897 FAM26DQ5JW98 314 aa8.99□□□□□ -0.97
BRCA1-229ENST00000621897 LINC00114Q6XXX2 140 aa8.99□□□□□ -0.97
BRCA1-229ENST00000621897 TMEM151AQ8N4L1 468 aa8.99□□□□□ -0.97
BRCA1-229ENST00000621897 BHMTQ93088 406 aa8.99□□□□□ -0.97
BRCA1-229ENST00000621897 IFT43Q96FT9 208 aa8.99□□□□□ -0.97
BRCA1-229ENST00000621897 ELOA3CA0A087WX78 387 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-229ENST00000621897 TMEM88BA6NKF7 163 aa8.98□□□□□ -0.97
BRCA1-229ENST00000621897 ELOA3DA6NLF2 546 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-229ENST00000621897 PHF20L1A8MW92 1017 aa8.98□□□□□ -0.97
BRCA1-229ENST00000621897 SUPT5HO00267 1087 aaKnown RBP8.98□□□□□ -0.97
BRCA1-229ENST00000621897 MICAL2O94851 1124 aa8.98□□□□□ -0.97
BRCA1-229ENST00000621897 ATP2B4P23634 1241 aa8.98□□□□□ -0.97
BRCA1-229ENST00000621897 NAA30Q147X3 362 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-229ENST00000621897 ELOA3BQ3SY89 546 aa8.98□□□□□ -0.97
BRCA1-229ENST00000621897 KANK3Q6NY19 840 aa8.98□□□□□ -0.97
BRCA1-229ENST00000621897 ELOA3Q8NG57 546 aa8.98□□□□□ -0.97
BRCA1-229ENST00000621897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.98□□□□□ -0.97
BRCA1-229ENST00000621897 USP20Q9Y2K6 914 aa8.98□□□□□ -0.97
BRCA1-229ENST00000621897 OPLAHO14841 1288 aa8.97□□□□□ -0.97
BRCA1-229ENST00000621897 C16orf46Q6P387 395 aa8.97□□□□□ -0.97
BRCA1-229ENST00000621897 TNFRSF25Q93038 417 aa8.97□□□□□ -0.97
BRCA1-229ENST00000621897 COL26A1Q96A83 441 aa8.97□□□□□ -0.97
BRCA1-229ENST00000621897 GSX2Q9BZM3 304 aa8.97□□□□□ -0.97
BRCA1-229ENST00000621897 MKL2Q9ULH7 1088 aa8.97□□□□□ -0.97
BRCA1-229ENST00000621897 CARNS1A5YM72 827 aa8.96□□□□□ -0.98
BRCA1-229ENST00000621897 ADARB2-AS1A8MUL3 147 aa8.96□□□□□ -0.98
BRCA1-229ENST00000621897 TNFRSF10BO14763 440 aa8.96□□□□□ -0.98
BRCA1-229ENST00000621897 PPP1R15AO75807 674 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-229ENST00000621897 SCNN1AP37088 669 aa8.96□□□□□ -0.98
BRCA1-229ENST00000621897 ARSDP51689 593 aa8.96□□□□□ -0.98
BRCA1-229ENST00000621897 TREML1Q86YW5 311 aa8.96□□□□□ -0.98
BRCA1-229ENST00000621897 KCTD17Q8N5Z5 321 aa8.96□□□□□ -0.98
BRCA1-229ENST00000621897 SUV39H2Q9H5I1 410 aa8.96□□□□□ -0.98
BRCA1-229ENST00000621897 ADH7P40394 386 aa8.95□□□□□ -0.98
BRCA1-229ENST00000621897 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
BRCA1-229ENST00000621897 ETFBKMTQ8IXQ9 262 aa8.95□□□□□ -0.98
BRCA1-229ENST00000621897 SEPT3Q9UH03 358 aa8.95□□□□□ -0.98
BRCA1-229ENST00000621897 STARD13Q9Y3M8 1113 aa8.95□□□□□ -0.98
BRCA1-229ENST00000621897 NFKB1P19838 968 aa8.94□□□□□ -0.98
BRCA1-229ENST00000621897 COL8A1P27658 744 aa8.94□□□□□ -0.98
BRCA1-229ENST00000621897 CCINQ13939 588 aa8.94□□□□□ -0.98
BRCA1-229ENST00000621897 DCAF5Q96JK2 942 aa8.94□□□□□ -0.98
BRCA1-229ENST00000621897 ARID3AQ99856 593 aa8.94□□□□□ -0.98
BRCA1-229ENST00000621897 PTCD1O75127 700 aaKnown RBP8.93□□□□□ -0.98
BRCA1-229ENST00000621897 EPB42P16452 691 aa8.93□□□□□ -0.98
BRCA1-229ENST00000621897 KRT25Q7Z3Z0 450 aa8.93□□□□□ -0.98
BRCA1-229ENST00000621897 RGL4Q8IZJ4 473 aa8.93□□□□□ -0.98
BRCA1-229ENST00000621897 RTCBQ9Y3I0 505 aaKnown RBP8.93□□□□□ -0.98
BRCA1-229ENST00000621897 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-229ENST00000621897 ALBP02768 609 aa8.92□□□□□ -0.98
BRCA1-229ENST00000621897 ALAS2P22557 587 aa8.92□□□□□ -0.98
BRCA1-229ENST00000621897 TBC1D8BQ0IIM8 1120 aa8.92□□□□□ -0.98
BRCA1-229ENST00000621897 C8orf86Q6ZUL3 223 aa8.92□□□□□ -0.98
BRCA1-229ENST00000621897 IGFLR1Q9H665 355 aa8.92□□□□□ -0.98
BRCA1-229ENST00000621897 ZFATQ9P243 1243 aa8.92□□□□□ -0.98
BRCA1-229ENST00000621897 GNB5O14775 395 aa8.91□□□□□ -0.98
BRCA1-229ENST00000621897 BRD2P25440 801 aaKnown RBP8.91□□□□□ -0.98
BRCA1-229ENST00000621897 TARSP26639 723 aaKnown RBP8.91□□□□□ -0.98
BRCA1-229ENST00000621897 ERICH6Q7L0X2 663 aa8.91□□□□□ -0.98
BRCA1-229ENST00000621897 TRIM11Q96F44 468 aa8.91□□□□□ -0.98
BRCA1-229ENST00000621897 PNMA5Q96PV4 448 aa8.91□□□□□ -0.98
BRCA1-229ENST00000621897 UBE2OQ9C0C9 1292 aaKnown RBP8.91□□□□□ -0.98
BRCA1-229ENST00000621897 SASH3O75995 380 aa8.9□□□□□ -0.98
BRCA1-229ENST00000621897 CMTR1Q8N1G2 835 aaKnown RBP8.9□□□□□ -0.98
BRCA1-229ENST00000621897 EFCC1Q9HA90 598 aa8.9□□□□□ -0.98
BRCA1-229ENST00000621897 DNAJB12Q9NXW2 375 aaKnown RBP8.9□□□□□ -0.98
BRCA1-229ENST00000621897 KCNMB2Q9Y691 235 aa8.9□□□□□ -0.98
BRCA1-229ENST00000621897 M0R082 166 aa8.89□□□□□ -0.99
BRCA1-229ENST00000621897 ZBTB39O15060 712 aa8.89□□□□□ -0.99
BRCA1-229ENST00000621897 ITGB2P05107 769 aa8.89□□□□□ -0.99
BRCA1-229ENST00000621897 SSFA2P28290 1259 aa8.89□□□□□ -0.99
BRCA1-229ENST00000621897 ZNF417Q8TAU3 575 aa8.89□□□□□ -0.99
BRCA1-229ENST00000621897 ZNF587Q96SQ5 575 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-229ENST00000621897 NAGPAQ9UK23 515 aa8.89□□□□□ -0.99
BRCA1-229ENST00000621897 SLC6A14Q9UN76 642 aa8.89□□□□□ -0.99
BRCA1-229ENST00000621897 COL9A3Q14050 684 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms