RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 A0A0G2JLW4 131 aa18.29■□□□□ 0.52
CBWD3-217ENST00000621474 BRPF1P55201 1214 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-217ENST00000621474 ERFEQ4G0M1 354 aa18.29■□□□□ 0.52
CBWD3-217ENST00000621474 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
CBWD3-217ENST00000621474 BRIP1Q9BX63 1249 aa18.29■□□□□ 0.52
CBWD3-217ENST00000621474 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
CBWD3-217ENST00000621474 DPEP1P16444 411 aa18.28■□□□□ 0.52
CBWD3-217ENST00000621474 CHRNA5P30532 468 aa18.28■□□□□ 0.52
CBWD3-217ENST00000621474 PPP1R42Q7Z4L9 355 aa18.28■□□□□ 0.52
CBWD3-217ENST00000621474 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
CBWD3-217ENST00000621474 NYXQ9GZU5 481 aa18.28■□□□□ 0.52
CBWD3-217ENST00000621474 RIC1Q4ADV7 1423 aa18.28■□□□□ 0.52
CBWD3-217ENST00000621474 KLRG2A4D1S0 409 aaPredicted RBP18.27■□□□□ 0.52
CBWD3-217ENST00000621474 ST5P78524 1137 aa18.27■□□□□ 0.52
CBWD3-217ENST00000621474 YTHDC1Q96MU7 727 aaKnown RBP18.27■□□□□ 0.52
CBWD3-217ENST00000621474 UTP14AQ9BVJ6 771 aaKnown RBP18.27■□□□□ 0.52
CBWD3-217ENST00000621474 CACNA1SQ13698 1873 aa18.27■□□□□ 0.52
CBWD3-217ENST00000621474 CWF19L2Q2TBE0 894 aaKnown RBP18.27■□□□□ 0.51
CBWD3-217ENST00000621474 NPHP1O15259 732 aa18.26■□□□□ 0.51
CBWD3-217ENST00000621474 CCDC191Q8NCU4 936 aa18.26■□□□□ 0.51
CBWD3-217ENST00000621474 PTPRCP08575 1304 aa18.26■□□□□ 0.51
CBWD3-217ENST00000621474 RNF123Q5XPI4 1314 aa18.26■□□□□ 0.51
CBWD3-217ENST00000621474 ARFGEF1Q9Y6D6 1849 aa18.25■□□□□ 0.51
CBWD3-217ENST00000621474 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
CBWD3-217ENST00000621474 BCAR3O75815 825 aa18.25■□□□□ 0.51
CBWD3-217ENST00000621474 BEND3Q5T5X7 828 aa18.25■□□□□ 0.51
CBWD3-217ENST00000621474 C3orf67Q6ZVT6 689 aa18.25■□□□□ 0.51
CBWD3-217ENST00000621474 TRMT112Q9UI30 125 aaKnown RBP18.25■□□□□ 0.51
CBWD3-217ENST00000621474 WWC3Q9ULE0 1092 aa18.25■□□□□ 0.51
CBWD3-217ENST00000621474 GTF2E1P29083 439 aaPredicted RBP18.24■□□□□ 0.51
CBWD3-217ENST00000621474 PDE6BP35913 854 aa18.24■□□□□ 0.51
CBWD3-217ENST00000621474 SLC10A5Q5PT55 438 aa18.24■□□□□ 0.51
CBWD3-217ENST00000621474 FAM89AQ96GI7 184 aa18.24■□□□□ 0.51
CBWD3-217ENST00000621474 SH3TC1Q8TE82 1336 aa18.24■□□□□ 0.51
CBWD3-217ENST00000621474 SRGNP10124 158 aa18.23■□□□□ 0.51
CBWD3-217ENST00000621474 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
CBWD3-217ENST00000621474 CRY2Q49AN0 593 aa18.23■□□□□ 0.51
CBWD3-217ENST00000621474 LINS1Q8NG48 757 aa18.23■□□□□ 0.51
CBWD3-217ENST00000621474 CWC25Q9NXE8 425 aaPredicted RBP18.23■□□□□ 0.51
CBWD3-217ENST00000621474 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
CBWD3-217ENST00000621474 NEXNQ0ZGT2 675 aa18.23■□□□□ 0.51
CBWD3-217ENST00000621474 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
CBWD3-217ENST00000621474 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
CBWD3-217ENST00000621474 SLX4Q8IY92 1834 aa18.23■□□□□ 0.51
CBWD3-217ENST00000621474 MYH3P11055 1940 aa18.23■□□□□ 0.51
CBWD3-217ENST00000621474 TAF1P21675 1872 aa18.22■□□□□ 0.51
CBWD3-217ENST00000621474 HCLS1P14317 486 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-217ENST00000621474 RTL5Q5HYW3 569 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-217ENST00000621474 H0YIN7 160 aa18.21■□□□□ 0.51
CBWD3-217ENST00000621474 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
CBWD3-217ENST00000621474 GCKRQ14397 625 aa18.21■□□□□ 0.51
CBWD3-217ENST00000621474 JARID2Q92833 1246 aaPredicted RBP18.21■□□□□ 0.51
CBWD3-217ENST00000621474 COL4A1P02462 1669 aa18.2■□□□□ 0.5
CBWD3-217ENST00000621474 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
CBWD3-217ENST00000621474 PIM2Q9P1W9 311 aa18.2■□□□□ 0.5
CBWD3-217ENST00000621474 CASP7P55210 303 aa18.2■□□□□ 0.5
CBWD3-217ENST00000621474 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
CBWD3-217ENST00000621474 PDZRN3Q9UPQ7 1066 aa18.2■□□□□ 0.5
CBWD3-217ENST00000621474 MASTLQ96GX5 879 aa18.19■□□□□ 0.5
CBWD3-217ENST00000621474 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
CBWD3-217ENST00000621474 CDHR2Q9BYE9 1310 aa18.18■□□□□ 0.5
CBWD3-217ENST00000621474 H7C1W4 665 aa18.18■□□□□ 0.5
CBWD3-217ENST00000621474 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
CBWD3-217ENST00000621474 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
CBWD3-217ENST00000621474 ARHGAP45Q92619 1136 aa18.18■□□□□ 0.5
CBWD3-217ENST00000621474 TRIM27P14373 513 aa18.17■□□□□ 0.5
CBWD3-217ENST00000621474 NPR1P16066 1061 aa18.17■□□□□ 0.5
CBWD3-217ENST00000621474 NLRP3Q96P20 1036 aa18.17■□□□□ 0.5
CBWD3-217ENST00000621474 BCS1LQ9Y276 419 aa18.17■□□□□ 0.5
CBWD3-217ENST00000621474 HOXA10P31260 410 aaPredicted RBP18.16■□□□□ 0.5
CBWD3-217ENST00000621474 GPR162Q16538 588 aa18.16■□□□□ 0.5
CBWD3-217ENST00000621474 UBE3BQ7Z3V4 1068 aa18.16■□□□□ 0.5
CBWD3-217ENST00000621474 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
CBWD3-217ENST00000621474 ZNF622Q969S3 477 aaKnown RBP eCLIP18.16■□□□□ 0.5
CBWD3-217ENST00000621474 SRCIN1Q9C0H9 1055 aa18.16■□□□□ 0.5
CBWD3-217ENST00000621474 ABCC4O15439 1325 aa18.16■□□□□ 0.5
CBWD3-217ENST00000621474 ALDH1L1O75891 902 aa18.16■□□□□ 0.5
CBWD3-217ENST00000621474 DALRD3Q5D0E6 543 aaKnown RBP18.16■□□□□ 0.5
CBWD3-217ENST00000621474 TTLL6Q8N841 843 aa18.16■□□□□ 0.5
CBWD3-217ENST00000621474 SF3B3Q15393 1217 aaKnown RBP18.15■□□□□ 0.5
CBWD3-217ENST00000621474 ATF7IPQ6VMQ6 1270 aa18.15■□□□□ 0.5
CBWD3-217ENST00000621474 FRAT1Q92837 279 aaPredicted RBP18.15■□□□□ 0.5
CBWD3-217ENST00000621474 API5Q9BZZ5 524 aaKnown RBP18.15■□□□□ 0.5
CBWD3-217ENST00000621474 FER1L6Q2WGJ9 1857 aa18.15■□□□□ 0.5
CBWD3-217ENST00000621474 PRPF40BQ6NWY9 871 aaKnown RBP18.14■□□□□ 0.49
CBWD3-217ENST00000621474 SLC51AQ86UW1 340 aa18.14■□□□□ 0.49
CBWD3-217ENST00000621474 CHD4Q14839 1912 aa18.14■□□□□ 0.49
CBWD3-217ENST00000621474 UTYO14607 1347 aa18.14■□□□□ 0.49
CBWD3-217ENST00000621474 GRM8O00222 908 aa18.13■□□□□ 0.49
CBWD3-217ENST00000621474 PDE8AO60658 829 aa18.13■□□□□ 0.49
CBWD3-217ENST00000621474 NBPF7P0C2Y1 421 aaPredicted RBP18.13■□□□□ 0.49
CBWD3-217ENST00000621474 C7orf43Q8WVR3 580 aa18.13■□□□□ 0.49
CBWD3-217ENST00000621474 CNKSR1Q969H4 720 aa18.13■□□□□ 0.49
CBWD3-217ENST00000621474 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
CBWD3-217ENST00000621474 SNED1Q8TER0 1413 aa18.13■□□□□ 0.49
CBWD3-217ENST00000621474 RPGRQ92834 1020 aaKnown RBP18.12■□□□□ 0.49
CBWD3-217ENST00000621474 PLA2G12BQ9BX93 195 aa18.12■□□□□ 0.49
CBWD3-217ENST00000621474 SBF1O95248 1867 aa18.12■□□□□ 0.49
CBWD3-217ENST00000621474 IPO8O15397 1037 aaKnown RBP18.12■□□□□ 0.49
CBWD3-217ENST00000621474 ZKSCAN2Q63HK3 967 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms