RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-223ENST00000619193 CLCN6P51797 869 aa7.23□□□□□ -1.25
RDM1-223ENST00000619193 NEK4P51957 841 aa7.23□□□□□ -1.25
RDM1-223ENST00000619193 TERF1P54274 439 aa7.23□□□□□ -1.25
RDM1-223ENST00000619193 EIF4A1P60842 406 aaKnown RBP7.23□□□□□ -1.25
RDM1-223ENST00000619193 MTX1Q13505 466 aa7.23□□□□□ -1.25
RDM1-223ENST00000619193 BEND3Q5T5X7 828 aa7.23□□□□□ -1.25
RDM1-223ENST00000619193 CCDC30Q5VVM6 783 aa7.23□□□□□ -1.25
RDM1-223ENST00000619193 KLHL34Q8N239 644 aa7.23□□□□□ -1.25
RDM1-223ENST00000619193 ZNF526Q8TF50 670 aaPredicted RBP7.23□□□□□ -1.25
RDM1-223ENST00000619193 PHF12Q96QT6 1004 aa7.23□□□□□ -1.25
RDM1-223ENST00000619193 TSPYL2Q9H2G4 693 aaPredicted RBP7.23□□□□□ -1.25
RDM1-223ENST00000619193 WDR90Q96KV7 1748 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 GOLGA6L22H0YM25 854 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 KCNQ3O43525 872 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 HSP90AA1P07900 732 aaKnown RBP7.22□□□□□ -1.25
RDM1-223ENST00000619193 TPM2P07951 284 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 HTRA3P83110 453 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 TAF7Q15545 349 aaPredicted RBP7.22□□□□□ -1.25
RDM1-223ENST00000619193 GPR162Q16538 588 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 SLC4A10Q6U841 1118 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 RUFY3Q7L099 469 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 NAP1L5Q96NT1 182 aaPredicted RBP7.22□□□□□ -1.25
RDM1-223ENST00000619193 SGIP1Q9BQI5 828 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 FUCA2Q9BTY2 467 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 SRCIN1Q9C0H9 1055 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 PHAXQ9H814 394 aaKnown RBP7.22□□□□□ -1.25
RDM1-223ENST00000619193 SNRKQ9NRH2 765 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 SNX14Q9Y5W7 946 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 C5P01031 1676 aa7.22□□□□□ -1.25
RDM1-223ENST00000619193 RAB11FIP3O75154 756 aa7.21□□□□□ -1.26
RDM1-223ENST00000619193 LARGE1O95461 756 aa7.21□□□□□ -1.26
RDM1-223ENST00000619193 HOXB7P09629 217 aa7.21□□□□□ -1.26
RDM1-223ENST00000619193 COL9A3Q14050 684 aaPredicted RBP7.21□□□□□ -1.26
RDM1-223ENST00000619193 CASC1Q6TDU7 716 aa7.21□□□□□ -1.26
RDM1-223ENST00000619193 PPP1R42Q7Z4L9 355 aa7.21□□□□□ -1.26
RDM1-223ENST00000619193 RHPN1Q8TCX5 695 aa7.21□□□□□ -1.26
RDM1-223ENST00000619193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.21□□□□□ -1.26
RDM1-223ENST00000619193 NPHP3Q7Z494 1330 aa7.21□□□□□ -1.26
RDM1-223ENST00000619193 SYCE3A1L190 88 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 RRP9O43818 475 aaKnown RBP7.2□□□□□ -1.26
RDM1-223ENST00000619193 MBD3O95983 291 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 NBPF7P0C2Y1 421 aaPredicted RBP7.2□□□□□ -1.26
RDM1-223ENST00000619193 AMPHP49418 695 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 FKBP5Q13451 457 aaPredicted RBP7.2□□□□□ -1.26
RDM1-223ENST00000619193 NUTM1Q86Y26 1132 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 RTF1Q92541 710 aaKnown RBP7.2□□□□□ -1.26
RDM1-223ENST00000619193 IP6K1Q92551 441 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 FAM212AQ96EL1 285 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 KAZALD1Q96I82 304 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 LGR6Q9HBX8 967 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 WWC3Q9ULE0 1092 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 ZKSCAN5Q9Y2L8 839 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 TCHHQ07283 1943 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 ABCC6O95255 1503 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 UTYO14607 1347 aa7.2□□□□□ -1.26
RDM1-223ENST00000619193 SOX12O15370 315 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 AP5Z1O43299 807 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 NBPF6Q5VWK0 638 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 KIAA1211Q6ZU35 1233 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 SPOCK2Q92563 424 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 NECTIN2Q92692 538 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 NBPF4Q96M43 638 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 STK31Q9BXU1 1019 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 UPF3BQ9BZI7 483 aaKnown RBP7.19□□□□□ -1.26
RDM1-223ENST00000619193 IL1RAPL2Q9NP60 686 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 SPATA31A3Q5VYP0 1347 aa7.19□□□□□ -1.26
RDM1-223ENST00000619193 COL18A1P39060 1754 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 UBTFL1P0CB47 393 aaPredicted RBP7.18□□□□□ -1.26
RDM1-223ENST00000619193 MCM5P33992 734 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 AK2P54819 239 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 PTH1RQ03431 593 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 PROSER3Q2NL68 480 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 ESCO1Q5FWF5 840 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 HDGFL1Q5TGJ6 251 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 FOXD4L5Q5VV16 416 aaPredicted RBP7.18□□□□□ -1.26
RDM1-223ENST00000619193 FAM196AQ6ZSG2 479 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 USP48Q86UV5 1035 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 USHBP1Q8N6Y0 703 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 NGDNQ8NEJ9 315 aaKnown RBP7.18□□□□□ -1.26
RDM1-223ENST00000619193 FOXD4L4Q8WXT5 416 aaPredicted RBP7.18□□□□□ -1.26
RDM1-223ENST00000619193 GPBP1L1Q9HC44 474 aaPredicted RBP7.18□□□□□ -1.26
RDM1-223ENST00000619193 ANO2Q9NQ90 1003 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 CHPF2Q9P2E5 772 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 TTC41PQ6P2S7 1318 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 ALS2Q96Q42 1657 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 MED23Q9ULK4 1368 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 SCN11AQ9UI33 1791 aa7.18□□□□□ -1.26
RDM1-223ENST00000619193 MAP4K4O95819 1239 aaPredicted RBP7.17□□□□□ -1.26
RDM1-223ENST00000619193 ZSCAN22P10073 491 aaPredicted RBP7.17□□□□□ -1.26
RDM1-223ENST00000619193 YBX3P16989 372 aaKnown RBP eCLIP7.17□□□□□ -1.26
RDM1-223ENST00000619193 MCCP23508 829 aa7.17□□□□□ -1.26
RDM1-223ENST00000619193 APLP1P51693 650 aa7.17□□□□□ -1.26
RDM1-223ENST00000619193 NLRP6P59044 892 aa7.17□□□□□ -1.26
RDM1-223ENST00000619193 NECTIN1Q15223 517 aa7.17□□□□□ -1.26
RDM1-223ENST00000619193 UVSSAQ2YD98 709 aa7.17□□□□□ -1.26
RDM1-223ENST00000619193 ADCK5Q3MIX3 580 aa7.17□□□□□ -1.26
RDM1-223ENST00000619193 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.17□□□□□ -1.26
RDM1-223ENST00000619193 LRP10Q7Z4F1 713 aa7.17□□□□□ -1.26
RDM1-223ENST00000619193 DNAAF4Q8WXU2 420 aa7.17□□□□□ -1.26
RDM1-223ENST00000619193 TRIM44Q96DX7 344 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms