RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 CLASP1Q7Z460 1538 aa8.04□□□□□ -1.12
CUL3-216ENST00000617432 A6NJY4 79 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 SLFNL1Q499Z3 407 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 OXLD1Q5BKU9 147 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 USP21Q9UK80 565 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 CHIC2Q9UKJ5 165 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 ADAMTS12P58397 1594 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 SYNJ2O15056 1496 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 ARAP1Q96P48 1450 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 IRAK1P51617 712 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 SFSWAPQ12872 951 aaKnown RBP8.03□□□□□ -1.12
CUL3-216ENST00000617432 SLC51AQ86UW1 340 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 SERTAD1Q9UHV2 236 aa8.03□□□□□ -1.12
CUL3-216ENST00000617432 SPEM2Q0P670 501 aa8.02□□□□□ -1.13
CUL3-216ENST00000617432 LRRC69Q6ZNQ3 347 aa8.02□□□□□ -1.13
CUL3-216ENST00000617432 NEUROD4Q9HD90 331 aa8.01□□□□□ -1.13
CUL3-216ENST00000617432 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
CUL3-216ENST00000617432 USP3Q9Y6I4 520 aa8.01□□□□□ -1.13
CUL3-216ENST00000617432 CEP170Q5SW79 1584 aa8□□□□□ -1.13
CUL3-216ENST00000617432 TXLNAP40222 546 aa8□□□□□ -1.13
CUL3-216ENST00000617432 FMR1NBQ8N0W7 255 aaPredicted RBP8□□□□□ -1.13
CUL3-216ENST00000617432 CHMP7Q8WUX9 453 aaPredicted RBP8□□□□□ -1.13
CUL3-216ENST00000617432 ERCC6L2Q5T890 1561 aa8□□□□□ -1.13
CUL3-216ENST00000617432 BANK1Q8NDB2 785 aa7.99□□□□□ -1.13
CUL3-216ENST00000617432 PARP3Q9Y6F1 533 aa7.99□□□□□ -1.13
CUL3-216ENST00000617432 GRIN2AQ12879 1464 aa7.99□□□□□ -1.13
CUL3-216ENST00000617432 TMEM229AB2RXF0 380 aa7.98□□□□□ -1.13
CUL3-216ENST00000617432 APBB1O00213 710 aa7.98□□□□□ -1.13
CUL3-216ENST00000617432 EIF4G2P78344 907 aaKnown RBP eCLIP7.98□□□□□ -1.13
CUL3-216ENST00000617432 WFDC12Q8WWY7 111 aa7.98□□□□□ -1.13
CUL3-216ENST00000617432 KRTAP4-9Q9BYQ8 210 aa7.98□□□□□ -1.13
CUL3-216ENST00000617432 EML1O00423 815 aa7.97□□□□□ -1.13
CUL3-216ENST00000617432 TAL1P17542 331 aaPredicted RBP7.97□□□□□ -1.13
CUL3-216ENST00000617432 CYB5RLQ6IPT4 315 aa7.97□□□□□ -1.13
CUL3-216ENST00000617432 ILDR2Q71H61 639 aa7.97□□□□□ -1.13
CUL3-216ENST00000617432 JPH1Q9HDC5 661 aaPredicted RBP7.97□□□□□ -1.13
CUL3-216ENST00000617432 MAP7D1Q3KQU3 841 aa7.96□□□□□ -1.13
CUL3-216ENST00000617432 RNF114Q9Y508 228 aa7.96□□□□□ -1.13
CUL3-216ENST00000617432 ERICH3Q5RHP9 1530 aa7.96□□□□□ -1.14
CUL3-216ENST00000617432 SSTR4P31391 388 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 PRR23CQ6ZRP0 262 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 RAB44Q7Z6P3 723 aaPredicted RBP7.95□□□□□ -1.14
CUL3-216ENST00000617432 MTMR14Q8NCE2 650 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 C7orf43Q8WVR3 580 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 L3MBTL2Q969R5 705 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 FHAD1B1AJZ9 1412 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 NUP160Q12769 1436 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 IREB2P48200 963 aaKnown RBP7.95□□□□□ -1.14
CUL3-216ENST00000617432 CD97P48960 835 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 AFF1P51825 1210 aaKnown RBP7.95□□□□□ -1.14
CUL3-216ENST00000617432 KCNQ4P56696 695 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 TEAD4Q15561 434 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 DMRTC2Q8IXT2 367 aaPredicted RBP7.95□□□□□ -1.14
CUL3-216ENST00000617432 ZDHHC1Q8WTX9 485 aa7.95□□□□□ -1.14
CUL3-216ENST00000617432 BACH1O14867 736 aa7.94□□□□□ -1.14
CUL3-216ENST00000617432 DTWD1Q8N5C7 304 aa7.94□□□□□ -1.14
CUL3-216ENST00000617432 SLC6A14Q9UN76 642 aa7.94□□□□□ -1.14
CUL3-216ENST00000617432 NOS3P29474 1203 aa7.93□□□□□ -1.14
CUL3-216ENST00000617432 NOS2P35228 1153 aa7.93□□□□□ -1.14
CUL3-216ENST00000617432 NUDT8Q8WV74 236 aa7.93□□□□□ -1.14
CUL3-216ENST00000617432 BRD7Q9NPI1 651 aa7.93□□□□□ -1.14
CUL3-216ENST00000617432 SCHIP1Q9P0W5 487 aaPredicted RBP7.93□□□□□ -1.14
CUL3-216ENST00000617432 KCNH4Q9UQ05 1017 aa7.93□□□□□ -1.14
CUL3-216ENST00000617432 RUSC2Q8N2Y8 1516 aa7.92□□□□□ -1.14
CUL3-216ENST00000617432 SHROOM2Q13796 1616 aa7.92□□□□□ -1.14
CUL3-216ENST00000617432 FSTP19883 344 aa7.92□□□□□ -1.14
CUL3-216ENST00000617432 FBXO11Q86XK2 927 aa7.92□□□□□ -1.14
CUL3-216ENST00000617432 UBE2OQ9C0C9 1292 aaKnown RBP7.92□□□□□ -1.14
CUL3-216ENST00000617432 OAS3Q9Y6K5 1087 aaKnown RBP7.92□□□□□ -1.14
CUL3-216ENST00000617432 BHMTQ93088 406 aa7.91□□□□□ -1.14
CUL3-216ENST00000617432 MEGF10Q96KG7 1140 aa7.91□□□□□ -1.14
CUL3-216ENST00000617432 CEP63Q96MT8 703 aa7.91□□□□□ -1.14
CUL3-216ENST00000617432 TBC1D8BQ0IIM8 1120 aa7.9□□□□□ -1.14
CUL3-216ENST00000617432 PLPP7Q8NBV4 271 aa7.9□□□□□ -1.14
CUL3-216ENST00000617432 EFCC1Q9HA90 598 aa7.9□□□□□ -1.14
CUL3-216ENST00000617432 KIF27Q86VH2 1401 aa7.89□□□□□ -1.15
CUL3-216ENST00000617432 RGS9O75916 674 aaPredicted RBP7.89□□□□□ -1.15
CUL3-216ENST00000617432 PSAPL1Q6NUJ1 521 aa7.89□□□□□ -1.15
CUL3-216ENST00000617432 IGF2-ASQ6U949 168 aa7.89□□□□□ -1.15
CUL3-216ENST00000617432 RHPN1Q8TCX5 695 aa7.89□□□□□ -1.15
CUL3-216ENST00000617432 ANKIB1Q9P2G1 1089 aa7.89□□□□□ -1.15
CUL3-216ENST00000617432 ZNF232Q9UNY5 417 aa7.89□□□□□ -1.15
CUL3-216ENST00000617432 GP2P55259 537 aaKnown RBP7.88□□□□□ -1.15
CUL3-216ENST00000617432 MSL1Q68DK7 614 aa7.87□□□□□ -1.15
CUL3-216ENST00000617432 IGFLR1Q9H665 355 aa7.87□□□□□ -1.15
CUL3-216ENST00000617432 PCDHGA11Q9Y5H2 935 aa7.87□□□□□ -1.15
CUL3-216ENST00000617432 CUL7Q14999 1698 aa7.87□□□□□ -1.15
CUL3-216ENST00000617432 KIAA1324LA8MWY0 1029 aaPredicted RBP7.86□□□□□ -1.15
CUL3-216ENST00000617432 C1orf53Q5VUE5 145 aa7.86□□□□□ -1.15
CUL3-216ENST00000617432 DZIP1LQ8IYY4 767 aaKnown RBP7.86□□□□□ -1.15
CUL3-216ENST00000617432 KRTAP4-2Q9BYR5 136 aa7.86□□□□□ -1.15
CUL3-216ENST00000617432 PRG4Q92954 1404 aaPredicted RBP7.86□□□□□ -1.15
CUL3-216ENST00000617432 SERTM1A2A2V5 107 aa7.86□□□□□ -1.15
CUL3-216ENST00000617432 SFI1A8K8P3 1242 aa7.86□□□□□ -1.15
CUL3-216ENST00000617432 SNRKQ9NRH2 765 aa7.86□□□□□ -1.15
CUL3-216ENST00000617432 DNAJB12Q9NXW2 375 aaKnown RBP7.86□□□□□ -1.15
CUL3-216ENST00000617432 MED26O95402 600 aa7.85□□□□□ -1.15
CUL3-216ENST00000617432 TYRO3Q06418 890 aa7.85□□□□□ -1.15
CUL3-216ENST00000617432 SLC9A9Q8IVB4 645 aa7.85□□□□□ -1.15
CUL3-216ENST00000617432 CARMIL1Q5VZK9 1371 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms